Clc01G22670 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G22670
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ubiquitin-like superfamily protein
Location	ClcChr01: 33724543 .. 33733309 (-)
RNA-Seq Expression	Clc01G22670
Synteny	Clc01G22670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTGATCTTCGTTCCTGAGAAAGGAGATACGTTCGGCATAGAAGTTGGTTTCTTCGACACCGTATTGGAAATTAAAGAGAAGATTGAGAAATACCAGGGCATCCCCATTCCCAAACAAACCCTAATCTTCAATGGCCGCGTCCTCCAAGACCACCGTGACGTCGAATTCTGCGAAATCTTGCAACACTCTCGGATTCAGCTTGTGGTTGCTAATTCTGAATTATCTGCCAAATCAGAAATCGGACGCCTCATCATGAAACAGAATACTGTTCCTGATCCTATCATTCAGCCGCAGGGAGGGACTACGTCGTCCAAGAATAACAATAACAATAATAATAATTATAGTAATAGTAGTAGTAAGTTGAAAGTGATGGTGAAACCCAAATGTGGGAACTCAAAAATACCAATGGAAGTGAACCCAACCGACAACGTGGGAGAATTGAAGAAAGAGTTGCAAAAGCTGCAGCAGAGAATGCATTTTCATCTTCCATCAGAGGGTTTCTTTTTCATATATGACCGTGACGTTATGGACGAAGACCGCTCCTTCCGCTGGCATGGCGTCGCTCATGGCGATACTATTGAGATCTTCAATGGCACTGTTACTGGTGGATCTTAATTTCATAATTAGGTACCACGCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAATAATACACACATCAGATGGATGCAGCAATGGGATGTTATTAGAGTTGGTTGTGAATTTGTCAATTATATATATTCTTGTTTGTTAAAATTCATGCATGGAGGCTTATGTTAATTCCTTCTTTTGTAAATGTATATGTTGCTTCTGTATAATTTAATTAGTTGCAGTTGAAACCAACCCTAGAACACAAACCCATCAAGGGAATAATATTAAGGATTAAGGGGGTGTTTTTGTTGTATACAAATTGGAGGGGAGGGATTTAAAGCTAATTAACTAAGCTGCCTATAGGGTTGGTTATATATACAAACAACAAAGGGGGAGAGGAAGAGTTGGGGTAAAGATTTCTCCTTACAAACCCTACTTTTCCCATTCACTTGTTTGATTGATTGTATAATGCAGTGCTAGTGATCATTTGAAATTAAATTTAGGAATCAATTACCTCTATGAATATATGTGTGTTTGTTGTTGTTTTATGAAACTAAATACTAAAATTCAGGGACCAAAGAGATATATATATATATATATATATATATATATATATATATTTTTTTTTTTAATTTATTTATTTGTTTTTTTCCTTTTGTGAGAGAGAAGTAGAATAGAACTTAAAGGAAAAGTAAAAAGAACATAGAAAAGGGGAAAAAATAACAATTGAGAGTCATGTTAGCTTTTGAGTTGGGTTTTTTTGATGGAGGCATATGTCTTAACCAAAACACAATGCATTTTTTTTTTTACAAGTATTGAGAAACTTGATAATTCACAACTCTATAATACTTTAAATTCAATTAAAAAGAAAAGAAACGAAACGAATTGATTGGATTGTCAGTTTTTTAGTTGGCACCTTTTTCTATTATTTGCTTTAAATTTTAAGTGAATTTTCATATAAATTACGACTATTCTACTTTTTTTAATTCAACATGCATTCGACCCTCCAATCTTTAAACCTAGGAATATGCACTTTGTATGCAATTGAATTATACTTTTGAACGCAACCTGTAGGTTGAGTTCATATAAATGTATAACTAAAGAAAAGGATATAGACATTTGTGTAATGCCTAGTATTTATAATCATCAACATGTTATTCAAATATTGATTTTGTAAAAGTATAATAATAATAATAATAATAATAATAAATACAACTTATTTTAAGAACATGCTTCAATTTGCTTTTTGTTTCTTTTTTTGGTCGCTTTCAACAAGTACATAAAGGTAGAAGAGCTAAGTAAACATATATCCTATGATCATACGATAAATTATACCTAAAAGGAAATTTCAAAAGATGATTCCAAGATGTTAGACATATTTGTCTTAAAATTTTGTTTTGGATATAAGAAACTTATAATTTAAAATATATATATATATATTCTAAAATATTATATATGTGTGTGTGTGGATCAAGAAATATGATTCCCATCCACAACTTTGTTTTCCACTCTCTCGGTTTCCTTCCGAATGTAAACGGAGATTCTTTTCCCCCACAGCCCACTTGAGACCAAATTAATTGGACATTTATTATTAATGGTTAGTTTTCATAAGTCTATTTCTTTTGTATTTTATTATCTATACTTCCATTAAAATAAATAATTAAAAAAAAAAACTCAACATATAATATTACCTTAGTTGAGAATCAATAATTTCAAACCATATCGGTAAGACCAACTTAAATTCAAAACACCAACACCAACATAAAGGCCCTCAAATATGTTGAGCAGTTCCAACGACCAAACCAAACATTTATCCTCTCAAAATAGAATTATTCTTTAATTATCCCTACCTATAATATTTTTTTTCATTATTGATATTTCCTTTTATATACCTAGATATGACAATTATTTAATGATGCCATTGCATTTGGAGTTAATTAGATTGGTATTACACTCTTGAAAAATAATTAGGTAAAAGGGTAGTTTTGAAAAAAAAAAAAAAAAGGAAACAATGCTTTTTTTTTCTAATTAAAAAAATCTAATCATACCATTCACATTATATGAAATGATATTATATTTTTTTACTTTGAGATTAATTTTAGATAGGATAAAAGTAATTTTGAAGCAATTCTAGTTTGGAATGAATTACGAAAAAAATATTTTAAAAAAAAATCATTTTTATTTAAATTTTTTTTTATATATAAAAGAGATTAAAATTCACGTGAAAAACTATTTTGAATAGTTGCCAAACACTTCAATTTCTTCCACAATAACTTATATATTCCAAATTTGACCCAAATGATTATATATTAATTTTTAAAAAATCATTTTTTATTTATTTATTACTATAAAGTAAAATTCGATTACTAGTAGCTTTCTAAAATAGGTTTCCTAAAAATATGTAGCCTCCCTTAACCAACTTAAACTCTCGATTTTAACCTCCTAAAACTATGGCTCCACCTCTTTTTAAGTATTTTCTAATGTTAAATTAATTTGGAATCAATAGGTAGGACTATTAAAGAGTAGGGACACAAAAATAAAAATTTTAAAAAAACCGGTAAAAGGTCTATATACAATATTACACTTACACAACTTTATGAGAAAATAATAAAAGTGATCGACATGTTAACAAAAATTGGAATGTTCATAATTATTATTTCAATAAAAGAAAAATAGAAAAATACTTCAATGATATTATTACTTTCACATTTATAAATTTAAACTAAGAGATTATATTGTTACAAATTTGATGATACGTAATATAATTTTATTTTTTTTATTATATATTTTTATTATAATTGAAAAACATGGTTGGATATTATATATTATAATAACGACTTCTCCTAATATTGTATTATACAAAATAAATATTTATTAAAGTATTGTAAAAATGTTTGAAATAATAATATGTCTACTTTGTTATTACAATTAAATAATTTAATATTTATTTACCAATTCCTGTAAACTGTCTTTTTATTTTCAAAATTAAAATTTACCAAATACTAACTTACTTAATTTTAAAGTAGCTTGTCCTTGAAACAAAGTTGATAACAATTATTTTAAAAACTACAACCTCAAACGAAGTTTTGAAAACCTACCCTTCACTTTCCTTCATTTTATTTCTAACTAATACACATTAAAAATAAATAAAAAAATAATTTTTTAAAAATTTCTTTCATTTTATAGAGTTAGAGATAAAATATGTGTTTTTTTTCTTTATAATTTGAATTAATTAGAGATAAAATAGAAAAAAAATGAATGATAGATAAGATGAAATAGAAAATTCTCTCAAATAAAAATATAATAGGATTTTTTTTACATTGAAAGAGAACAAGTAATTTAAAAAATAAAAGAAAAAATGAGTAAAAAATATAATTTATATATATATATATACACACACATGTGACAGAAAAGTTGAGTGCAAGGGACGCACTCATAAAACATTTTCCCGTTTTTCCTAATTTTTTCTAAACGTATCAATGTAAGTAACCCTTGCATCCCACTCCTTTCTCACATTATACGAAATTAATTAAAGAATTGAATACGCCTAATTATTAAGGCACGGGTCACCCTTCATTGTATATTCAAATCTGTGGTCTGCCACCAGATAAGGTCTCCGCATAGGCTTTCTAAAAAGTAAACACCATTTGCTTTTATTTTATTAAATTTAAATCAAATTAAAGAAACTTGGGTTGTTTAGTATCATATTATTTTCTCTAATATTTTATTTTTTAGTACAACTATAAACTTTTTTAATTAATTGCTAATACATTCTAATTCGTATGGTTAGAGGTGCCATAAAATTGAAGATTAAAAATAAATCCTACCTAATTATTTTGTCTTCTAAAAAAATTAAAAAAAAAAAAAACTTAAAAGAAACTAAATATTTTGGGAATTTATAAAATTGCAAAAATGAGCGCTACTGGGCGCCCACAGAAACATGGCGTGTTGGGCCCGTGAAAGCCGTGGTCAAATACGTTTCATTTTGTTAATTATTTTCAATAGTTGTTTAAAAAATCCTACATGTTTTTTTTTTCAACGAATTACTAACAAAATTTTAATGTAAAGAAAAAGTTATATAAATTCCCAATTCAATTAAAAATTGGTAAGTCTCGTGCATTTCACCATAGTTTTAAGGGCAAACTGTAAAAACCACTAGAGTAACAATTACACCTCTAAATTTTTAATTAAAAAAATTATAGGATTCGCAAACGCAACTTAAGTATAATCAGTTGCAGAGGACAGAGAGTGACGACAATTTTCAATTATTTCTGTCGCTGGAGGTCGATTCCCATTTTGGTTTTGGGAGGAAGCTGAAGCACTTGATTTCGATAGATTGAAAGACATGGGGCGTGGCTGGAACAATCTCGTGATGGGAAATTGATGAAAAGTTGCTAAAGAGAAAGTGGGCGATTGAATTAGAAGGAAATGGCCATGGATGAGACTTGAAAGGTGAAAGGGTAGAGAGATTAGTTAAAAAGAGAAGTAACAAATATATTAGGAAATATTGAATAAATGGGTTTAATTTCCACATTAAGTGTTTAAGTTTTACACTTTTAAAATTCATCGCCATATTTCAGGAGTATTTTTTTTTTTCAATTACACTATTTTCAAAAATCAAACTAGTAGGGGAAGATAACAAAAACTTAATGAAAAGTTTGTCCTAAAAAGTATACTTAAGAAAAATAATGAGATTGCAAGGATTATGTTATGAAATTAAAATAAAGGTCAGTTGCGCAAACCATTTCTAAATTTTGAATTTTCTTTCAATTGCATATAACTTATAATTTAATCAATGATGTGGTTTGTTATGGTTGCGTCTATAAATTTGTAATTTGATTAATAAGTTTTTGTATTTTTTTTTTAATTTTATATTTATATTTGTTCTTGAATTATATATATTTTATTGAAGCATTGTTTAATAAATTAGGGGTTTGGAGCATTAATTATTTTAGTAAGTAGATTGTAATAGTATGTATTTTGGGTGCAAACTATTTTTAGATGCAAGCTATTTAAGTATGGATTACAAATGAGGAGAGAAGTTTGTAAAAAAACATAATAAAAAAAGTAGACAATGAGAGTTTTCAAATAGTTATTACAAGTATGATTATAATCATAGGATTAAAATAAATAGTTACTCTAAGCATGGTTATAATCATAATATTAAAATTTAGTCAGCATGGTTATAATCATAATATTTTCACATTTTAATTGGATTGGCGTCAATGTAAGAGGTGAATCAAAATATTGATAAAAAAATTTACAAAAACATAAAAACAGTGACACAAACTACAATGCAATAAAATAAAATAAAATAAAATAGATTAGAATTAAAGAATGGCTTTATTTAATAAAAAAATCAATCAACATCAATATTTTATTTATTTATGTATATTCCCACGTAATCTGGTTTGTCAATAAATAAATATCTATATATTTTGTCAACAAGCCAGGGTTTTGTATAAAAAAGTAAATATGCGAAATGCATTATTGGAGAGATTGCGTGGTCTATGCCTTTTGGCACCGTTCTTATCGCTTCCTATAAAGGGCCGTTCCCCTCCACCACAATTTCCAACTTGTTTTTGTAGCCTACCTACATTGTTTGACACCTACAATTACACGTGTCATGCATCTACTGGACCTTCATCATACGATATTTTTACCGCACTGACGAAATTGCCCTTCTCATCTAGCTATAAATATACCTCTCCGCCTCTTCTCCCTTCGTTCACTTTTCTCCAATTGTTCTTTGTATACACCTCCATTCAATTCTTTCAAGGTTCGTCTTTGTTTCTCTTCATTGGTTTTTTCAATTCTGCTCCTCTTTTCTGTGCTTCTTGTGATCTAGATGCTTGTTTTGGCTCTTTATTCTTCTGAATTGCTTTGTCAATTTTTGTTATCTCCCGATCCGAGTTTCTGAATTGTATGGTACTTGTTGGATTGGGATGTTTTAGGGTTCCGATATAGGGTTTTTATTTTCGCATGGATTGGATCTACGGTAAGATTCTTGTGATTTTAGGGATCGGAGTTCTTAATTTCTTCTTTTCCTTCTCTTGCAGATGCAAATCTTCGTTAAAACCCTAACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTCTGATACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAGCAACGTCTCATTTTCGCCGGAAAGCAACTCGAGGATGGCCGTACGTTGGCCGACTACAACATCCAAAAGGAATCAACCCTCCACCTGGTCCTCCGTCTTCGTGGTGGCATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCTGATACCATCGACAACGTAAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGATCAGCAACGTCTCATCTTCGCCGGAAAGCAACTCGAGGATGGCCGTACGTTGGCCGACTACAACATCCAAAAGGAGTCTACTCTCCACCTGGTCCTCCGTCTTCGTGGTGGTATGCAGATTTTCGTTAAGACCCTGACCGGTAAAACCATCACCCTCGAGGTTGAATCCTCTGATACCATCGATAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAACAAAGACTCATCTTTCGCCGGGAAGCAATTAGAAGACGGTCGTACCCTTGCTGATTACAACATCCAGAAGGAGTCGACCCTCCACCTTGTGTTGCGTCTTCGTGGTGGTATGCAGATTTTCGTCAAGACATTGACCGGCAAGACCATCACCCTAGAGGTTGAGAGTTCGGACACCATTGACAACGTTAAGGCTAAGATCCAAGACAAGGAGGGAATCCCACCAGACCAGCAGAGGTTGATCTTCGCTGGAAAGCAGCTGGAAGATGGAAGGACTTTGGCTGACTATAACATCCAGAAGGAGTCAACCTTGCACTTGGTGCTTCGTCTCAGGGGTGGGATGCAGATCTTCGTGAAAACCTTGACCGGAAAGACCATCACCTTGGAGGTGGAGAGCTCTGACACGATCGATAATGTAAAAGCTAAAATTCAGGACAAGGAAGGCATCCCTCCGGACCAGCAGAGGCTGATCTTCGCAGGGAAGCAGCTGGAGGATGGAAGGACTCTCGCTGATTACAACATTCAGAAGGAGTCCACCCTTCACCTCGTACTGCGTCTTCGTGGTGGTTTTTAGATGGTGGTGGGTGTTTGGTTGGGTCTTGGACATTCTCTTTGAATCCTTTCTGGATGTTAATGGGTTGAAGATTGGTACTTGGTAACAGCTGCCTGTAGGCCCTATTAATTGCTGTTGAATAAAATTGATTTCCCAGAATGTTGTGTTTTTCTTTATTTGTATTTGTACTTTTCTAATGAAATGAAGATCCGAATGGTGCATTGTATTGTGTATCTTCACTGAGCTCTGATCATTCCAGTATGTTTTTCTGTATGTAGGACAGTTTTGAGTTGCCGGTCTGACTCGTTTTATACTCCATGCGTGCTTCGTTCCCATAATCTGAGGATGCTTTATTACTTCTTATGCTAGTAGTTCCTAGGACATCAAATTCTTAAGACCTTGAAACGTTTCTAAATGAAATGATAGGGAACTACACGGAATTGAATTGGTAATTCAGCACGGTAGATTAAGTTTGATGTTTGCTCCTTTAAGATCAACTGTTGTGGGAGGAGCTGAAGATGAAAATTACAATAATGGGAATTTCTTTAGGATAATTTTTCGGTATTAAGAAACCGAGGATTCACCATTGGCTTTGATAGTCTCATGATTAAGTGACTAGATCAATGAAATTGTAATTTTGACGTTGAAGTGCATAACTGGCCAACATTCCTTGCCCCTTGCCCCTTCCGTTGCTTAATTTGTATATGTACTTTTTCTTTTTGACAAACACTTGCATGTTATCGACTTGATAGAGCCACTAGATCTTTTTCTACAACAGAACTGTAATGAGATCTATGAACTTACGGAATGGAATTCGACTACGTTGTTTCTGCTCTGGGAGAGATTGATGAAATATATTTTCTGCTTCCTTCAATGTTTAAAATGTGTTCTAAGTTCAGAACTTACGCAACCGTTTTATTTCGGTTAACAAAATAGTATTCCATATACAGAACAGAGGGAAACGAGTGA

mRNA sequence

ATGGACGTGATCTTCGTTCCTGAGAAAGGAGATACGTTCGGCATAGAAGTTGGTTTCTTCGACACCGTATTGGAAATTAAAGAGAAGATTGAGAAATACCAGGGCATCCCCATTCCCAAACAAACCCTAATCTTCAATGGCCGCGTCCTCCAAGACCACCGTGACGTCGAATTCTGCGAAATCTTGCAACACTCTCGGATTCAGCTTGTGGTTGCTAATTCTGAATTATCTGCCAAATCAGAAATCGGACGCCTCATCATGAAACAGAATACTGTTCCTGATCCTATCATTCAGCCGCAGGGAGGGACTACGTCGTCCAAGAATAACAATAACAATAATAATAATTATAGTAATAGTAGTAGTAAGTTGAAAGTGATGGTGAAACCCAAATGTGGGAACTCAAAAATACCAATGGAAGTGAACCCAACCGACAACGTGGGAGAATTGAAGAAAGAGTTGCAAAAGCTGCAGCAGAGAATGCATTTTCATCTTCCATCAGAGGGTTTCTTTTTCATATATGACCGTGACGTTATGGACGAAGACCGCTCCTTCCGCTGGCATGGCGGCCGTTCCCCTCCACCACAATTTCCAACTTGTTTTTGTAGCCTACCTACATTGTTTGACACCTACAATTACACGTGTCATGCATCTACTGGACCTTCATCATACGATATTTTTACCGCACTGACGAAATTGCCCTTCTCATCTAGCTATAAATATACCTCTCCGCCTCTTCTCCCTTCGTTCACTTTTCTCCAATTGTTCTTTGTATACACCTCCATTCAATTCTTTCAAGATCCGAATGGTGCATTGTATTGTGTATCTTCACTGAGCTCTGATCATTCCAGTATGTTTTTCTGTATGGAACTACACGGAATTGAATTGGTAATTCAGCACGGTAGATTAAGTTTGATGTTTGCTCCTTTAAGATCAACTGTTGTGGGAGGAGCTGAAGATGAAAATTACAATAATGGGAATTTCTTTAGGATAATTTTTCGAGCCACTAGATCTTTTTCTACAACAGAACTAACAGAGGGAAACGAGTGA

Coding sequence (CDS)

ATGGACGTGATCTTCGTTCCTGAGAAAGGAGATACGTTCGGCATAGAAGTTGGTTTCTTCGACACCGTATTGGAAATTAAAGAGAAGATTGAGAAATACCAGGGCATCCCCATTCCCAAACAAACCCTAATCTTCAATGGCCGCGTCCTCCAAGACCACCGTGACGTCGAATTCTGCGAAATCTTGCAACACTCTCGGATTCAGCTTGTGGTTGCTAATTCTGAATTATCTGCCAAATCAGAAATCGGACGCCTCATCATGAAACAGAATACTGTTCCTGATCCTATCATTCAGCCGCAGGGAGGGACTACGTCGTCCAAGAATAACAATAACAATAATAATAATTATAGTAATAGTAGTAGTAAGTTGAAAGTGATGGTGAAACCCAAATGTGGGAACTCAAAAATACCAATGGAAGTGAACCCAACCGACAACGTGGGAGAATTGAAGAAAGAGTTGCAAAAGCTGCAGCAGAGAATGCATTTTCATCTTCCATCAGAGGGTTTCTTTTTCATATATGACCGTGACGTTATGGACGAAGACCGCTCCTTCCGCTGGCATGGCGGCCGTTCCCCTCCACCACAATTTCCAACTTGTTTTTGTAGCCTACCTACATTGTTTGACACCTACAATTACACGTGTCATGCATCTACTGGACCTTCATCATACGATATTTTTACCGCACTGACGAAATTGCCCTTCTCATCTAGCTATAAATATACCTCTCCGCCTCTTCTCCCTTCGTTCACTTTTCTCCAATTGTTCTTTGTATACACCTCCATTCAATTCTTTCAAGATCCGAATGGTGCATTGTATTGTGTATCTTCACTGAGCTCTGATCATTCCAGTATGTTTTTCTGTATGGAACTACACGGAATTGAATTGGTAATTCAGCACGGTAGATTAAGTTTGATGTTTGCTCCTTTAAGATCAACTGTTGTGGGAGGAGCTGAAGATGAAAATTACAATAATGGGAATTTCTTTAGGATAATTTTTCGAGCCACTAGATCTTTTTCTACAACAGAACTAACAGAGGGAAACGAGTGA

Protein sequence

MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCEILQHSRIQLVVANSELSAKSEIGRLIMKQNTVPDPIIQPQGGTTSSKNNNNNNNNYSNSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHGGRSPPPQFPTCFCSLPTLFDTYNYTCHASTGPSSYDIFTALTKLPFSSSYKYTSPPLLPSFTFLQLFFVYTSIQFFQDPNGALYCVSSLSSDHSSMFFCMELHGIELVIQHGRLSLMFAPLRSTVVGGAEDENYNNGNFFRIIFRATRSFSTTELTEGNE

Homology

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BLAST of Clc01G22670 vs. NCBI nr
Match: XP_004134970.1 (ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus] >KAE8647664.1 hypothetical protein Csa_002851 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 6.5e-81
Identity = 160/190 (84.21%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVI VPEKGDTFGIEVG+FDTVLEIKEKIEKYQGIPIPKQTLIFNGR+LQD RDVEFCE
Sbjct: 1   MDVILVPEKGDTFGIEVGYFDTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQ-NTVPDPII-QPQGGTTSSKNNNNNNNNYSN 120
           ILQHSRIQLVVANSELSA+S+IGRLIMKQ N +PDP    PQ GTTS+KN+N        
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHPQSGTTSTKNSN-------- 120

Query: 121 SSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVM 180
              KLKVMVKPKCGNSKIPMEVNPTDNVGELKKEL+KLQQRM FHLP EGFFFIYDRDVM
Sbjct: 121 ---KLKVMVKPKCGNSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDVM 179

Query: 181 DEDRSFRWHG 189
           DEDRSFRWHG
Sbjct: 181 DEDRSFRWHG 179

[Close]

BLAST of Clc01G22670 vs. NCBI nr
Match: XP_038881479.1 (ubiquitin domain-containing protein 7SL RNA1-like [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 6.5e-81
Identity = 163/196 (83.16%), Postives = 175/196 (89.29%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVIFVPE+G+TFGIEVGFFDTVLEIKEKIEKY GIPIPKQ+LIFNGR+LQDHRDVEFCE
Sbjct: 1   MDVIFVPEQGETFGIEVGFFDTVLEIKEKIEKYHGIPIPKQSLIFNGRILQDHRDVEFCE 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQNTV-PDP-----IIQPQGGTTSSKNNNNNNN 120
           ILQHSRIQLVVANSELSA+SEIGRLIMKQN + PDP       QPQ   TSSKNNNNNN+
Sbjct: 61  ILQHSRIQLVVANSELSAQSEIGRLIMKQNNILPDPPPPHQPPQPQKEITSSKNNNNNNS 120

Query: 121 N--YSNSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFI 180
           +   +N+ +KLKVMVKPK GNSKI MEVNPTDNVGELKKEL+KLQQRM FHLP EGFFFI
Sbjct: 121 SSINNNNYNKLKVMVKPKSGNSKIAMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFI 180

Query: 181 YDRDVMDEDRSFRWHG 189
           YDRDVMDEDRSFRWHG
Sbjct: 181 YDRDVMDEDRSFRWHG 196

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BLAST of Clc01G22670 vs. NCBI nr
Match: XP_008439960.1 (PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 156/191 (81.68%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVI VPE+GDTFGIEVG+FDTVLEIKEKIEKY GIPIPKQTLIFNGR+LQD RDVEFCE
Sbjct: 1   MDVILVPEQGDTFGIEVGYFDTVLEIKEKIEKYHGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQ-NTVPDPII--QPQGGTTSSKNNNNNNNNYS 120
           ILQHSRIQLVVANSELSA+S+IGRLIMKQ N +PDP     P  GTTS+KN+N       
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHHPPSGTTSTKNSN------- 120

Query: 121 NSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDV 180
               KLKVMVKPKCG+SKIPMEVNPTDNVGELKKEL+KLQQRM FHLP EGFFFIYDRDV
Sbjct: 121 ----KLKVMVKPKCGSSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDV 180

Query: 181 MDEDRSFRWHG 189
           MDEDRSFRWHG
Sbjct: 181 MDEDRSFRWHG 180

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BLAST of Clc01G22670 vs. NCBI nr
Match: XP_022950206.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 2.2e-60
Identity = 138/230 (60.00%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV+FVPEKG+ F IEVGFFDTVLEIKEKI+KY  IPIPKQTLIFNG VLQD RDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANS---------ELSAKSEIGRL---------------IMKQNTVPDPI 120
           ILQHSRIQL+VA+          ++     IGRL               IM Q+    P 
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPT 120

Query: 121 -IQPQGGTTSSKNNNNN-----------------NNNYSNSSSKLKVMVKPKCGNSKIPM 180
            +Q Q     S+ + N+                      +S +KLKVMV+PK GNSKIPM
Sbjct: 121 ELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTGSSKNKLKVMVQPKFGNSKIPM 180

Query: 181 EVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHG 189
           EVNPTDNVGELKKELQKLQQR+HFHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 181 EVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHG 230

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BLAST of Clc01G22670 vs. NCBI nr
Match: XP_023543067.1 (biquitin domain-containing protein 7SL RNA1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 2.8e-60
Identity = 140/233 (60.09%), Postives = 156/233 (66.95%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV+FVPEKG+ F IEVGFFDTVLEIKEKI+KY  IPIPKQTLIFNG VLQD RDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVA-----NSELSAKSE--------IGRL---------------IMKQNTV 120
           ILQHSRIQL+VA     NS+   +S+        IGRL               IM Q+  
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 PDPIIQPQGGTTSSKNNNNN-----------------NNNYSNSSSKLKVMVKPKCGNSK 180
               +Q Q     S+ + N+                      +S +KLKVMV+PK GNSK
Sbjct: 121 STTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTGSSKNKLKVMVQPKFGNSK 180

Query: 181 IPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHG 189
           IPMEVNPTDNVGELKKELQKLQQR+HFHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 181 IPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHG 233

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BLAST of Clc01G22670 vs. ExPASy Swiss-Prot
Match: Q9ZT95 (Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=7SL1 PE=3 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12
Identity = 69/250 (27.60%), Postives = 107/250 (42.80%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           M+V    E G +F I + F +TVLEIKEKIEK QGIP+ KQ L  +G+ L+D        
Sbjct: 1   MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  ILQHSRIQLVVAN---------------------------SELSAKSEIGRLIMKQ---- 120
           IL  SR+ L ++                             + S   +I R++ ++    
Sbjct: 61  ILFESRLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKITRVMARRVHNI 120

Query: 121 -NTVP----DPIIQPQGGTTSSKNNNNN--------------------------NNNYSN 180
            +++P    D ++ P+   T +     N                                
Sbjct: 121 YSSLPAYSLDELLGPKYSATVAVGGRTNQVVQPTEQASTSGTAKEVLRDSDSPVEKKIKT 180

Query: 181 SSSKLKVMVKPKCGNSK-IPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDV 188
           +  K  V VKP   +++ I +EVN  DNV EL+KEL K+Q+R   +LP E F  +     
Sbjct: 181 NPMKFTVHVKPYQEDTRMIHVEVNADDNVEELRKELVKMQERGELNLPHEAFHLVSSELP 240

[Close]

BLAST of Clc01G22670 vs. ExPASy Swiss-Prot
Match: Q9ZQZ6 (Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=7SL2 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.6e-11
Identity = 68/249 (27.31%), Postives = 111/249 (44.58%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           M+V    E G +F I + F +TVL+IKEKIEK QGIP+ KQ L  +G+ L+D        
Sbjct: 1   MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60

Query: 61  ILQHSRIQLVVANSELSAKSE--------------------------IGRLIMKQ----- 120
           IL  S +  +  +++ +  +E                          + R++ ++     
Sbjct: 61  ILFESLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESKKLTRVMARRVHNVY 120

Query: 121 NTVP----DPIIQPQ-------GGTTSSKNNNNNNNNYSNSSS----------------- 180
           +++P    D ++ P+       GG T+         + S ++                  
Sbjct: 121 SSLPAYSLDELLGPKYSATVTVGGRTNQVVQTTEQASTSGTAKEVLRDSDSPVEKKIKTN 180

Query: 181 --KLKVMVKPKCGNSK-IPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVM 188
             K  V VKP   ++K I +EVN  DNV EL+KEL K+Q+R   +LP E F  +     +
Sbjct: 181 PMKFTVHVKPYQEDTKMIQVEVNADDNVEELRKELVKMQERGELNLPHEAFHLVSSELPL 240

[Close]

BLAST of Clc01G22670 vs. ExPASy Swiss-Prot
Match: Q58G87 (Polyubiquitin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=UBQ3 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 10 GDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCEILQHSRIQL 69
          G T  +EV F DT+  +K KI+  +GIP  +Q LIF G+ L+D R +    I + S + L
Sbjct: 10 GKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 69

Query: 70 VV---ANSELSAKSEIGRLIMKQNTVPDPI 97
          V+      ++  K+  G+ I  +    D I
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVESSDTI 99

[Close]

BLAST of Clc01G22670 vs. ExPASy Swiss-Prot
Match: P59669 (Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = 0


Query: 10  GDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCEILQHSRIQL 69
           G T  +EV   DT+  +K KI+  +GIP  +Q LIF G+ L+D R +    I + S + L
Sbjct: 238 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297

Query: 70  VV---ANSELSAKSEIGRLIMKQNTVPDPI 97
           VV      ++  K+  G+ I  +    D I
Sbjct: 298 VVRLRGGMQIFVKTLTGKTITLEVEASDTI 327

[Close]

BLAST of Clc01G22670 vs. ExPASy Swiss-Prot
Match: P48510 (Ubiquitin domain-containing protein DSK2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DSK2 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-04
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 4  IFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCEILQ 63
          I +    D + + V    TVL+ KE I K  GIP+  Q LI++G++L+D + VE   I  
Sbjct: 5  IHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQD 64

Query: 64 HSRIQLVVANSELSAKSEIG 84
             + LV +  +    S  G
Sbjct: 65 GHSVHLVKSQPKPQTASAAG 84

[Close]

BLAST of Clc01G22670 vs. ExPASy TrEMBL
Match: A0A1S3AZZ9 (uncharacterized protein LOC103484590 OS=Cucumis melo OX=3656 GN=LOC103484590 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 8.6e-79
Identity = 156/191 (81.68%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVI VPE+GDTFGIEVG+FDTVLEIKEKIEKY GIPIPKQTLIFNGR+LQD RDVEFCE
Sbjct: 1   MDVILVPEQGDTFGIEVGYFDTVLEIKEKIEKYHGIPIPKQTLIFNGRILQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQ-NTVPDPII--QPQGGTTSSKNNNNNNNNYS 120
           ILQHSRIQLVVANSELSA+S+IGRLIMKQ N +PDP     P  GTTS+KN+N       
Sbjct: 61  ILQHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHHPPSGTTSTKNSN------- 120

Query: 121 NSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDV 180
               KLKVMVKPKCG+SKIPMEVNPTDNVGELKKEL+KLQQRM FHLP EGFFFIYDRDV
Sbjct: 121 ----KLKVMVKPKCGSSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDV 180

Query: 181 MDEDRSFRWHG 189
           MDEDRSFRWHG
Sbjct: 181 MDEDRSFRWHG 180

[Close]

BLAST of Clc01G22670 vs. ExPASy TrEMBL
Match: A0A6J1GE65 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 GN=LOC111453369 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 138/230 (60.00%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV+FVPEKG+ F IEVGFFDTVLEIKEKI+KY  IPIPKQTLIFNG VLQD RDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANS---------ELSAKSEIGRL---------------IMKQNTVPDPI 120
           ILQHSRIQL+VA+          ++     IGRL               IM Q+    P 
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNAASPT 120

Query: 121 -IQPQGGTTSSKNNNNN-----------------NNNYSNSSSKLKVMVKPKCGNSKIPM 180
            +Q Q     S+ + N+                      +S +KLKVMV+PK GNSKIPM
Sbjct: 121 ELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAAPGMTTGSSKNKLKVMVQPKFGNSKIPM 180

Query: 181 EVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHG 189
           EVNPTDNVGELKKELQKLQQR+HFHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 181 EVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHG 230

[Close]

BLAST of Clc01G22670 vs. ExPASy TrEMBL
Match: A0A6J1IPZ4 (biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=LOC111478395 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 8.9e-60
Identity = 137/238 (57.56%), Postives = 153/238 (64.29%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV+FVPEKG+ F IEVGFFDTVLEIKEKI+KY  IPIPKQTLIFNG VLQD RDVEFCE
Sbjct: 1   MDVLFVPEKGEAFAIEVGFFDTVLEIKEKIQKYHHIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANS-------------ELSAKSEIGRL---------------IMKQNTV 120
           ILQHSRIQL+VA+              ++     IGRL               IM Q+  
Sbjct: 61  ILQHSRIQLLVASESQNNSQSQSQPQPQIDPNHSIGRLKQRIHDINSVGPINGIMLQSNA 120

Query: 121 PDPIIQPQGGTTSSKNNNNNNNNY----------------------SNSSSKLKVMVKPK 180
               +Q Q     S+ + N+                           +S +KLKVMV+PK
Sbjct: 121 SPTELQDQRSLRDSEMSENSEVEVCLRPSPTVSTAALGMTTPPPQPGSSKNKLKVMVQPK 180

Query: 181 CGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHG 189
            GNSKIPMEVNPTDNVGELKKELQKLQQR+HFHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 181 FGNSKIPMEVNPTDNVGELKKELQKLQQRLHFHLPPEGFFFIYDRDVMDEDRSFRWHG 238

[Close]

BLAST of Clc01G22670 vs. ExPASy TrEMBL
Match: A0A6J1CMB8 (actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-55
Identity = 132/239 (55.23%), Postives = 148/239 (61.92%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVIF P KG  F IEVGFFDTVLEIKEKI+KY  IPIPKQTLIFNG VLQD RDVEFCE
Sbjct: 1   MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCE 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQNTVPDPIIQ---PQGGTTSSKNNNN------ 120
           ILQ+SRI+L+VA S+ +  S         N      ++   P    + S N+NN      
Sbjct: 61  ILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAAAASVKIETPNSPISPSPNSNNKMIHHL 120

Query: 121 ----------------------------NNNN--------------YSNSSSKLKVMVKP 180
                                       +NN+               + SS KLKVMVKP
Sbjct: 121 QSQFPIEIDPTKDQIIMESAVVPLNELSDNNSEIEVVSAATSATAGSTGSSKKLKVMVKP 180

Query: 181 KCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDRDVMDEDRSFRWHG 189
           KCG+ KIPMEVN +DNVGELKKELQKLQQR+HFHLP EGFFFIYDRDVMDEDRSFRWHG
Sbjct: 181 KCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHG 239

[Close]

BLAST of Clc01G22670 vs. ExPASy TrEMBL
Match: A0A6P5WYL1 (probable ubiquitin receptor RAD23 isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111278254 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.2e-53
Identity = 118/197 (59.90%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDVIF  ++G  F IEVGFFDTVLEIKEK++KYQGIPIP QTL+FNG+VLQD +DVEFCE
Sbjct: 1   MDVIFETQRGRPFSIEVGFFDTVLEIKEKVQKYQGIPIPSQTLVFNGKVLQDEKDVEFCE 60

Query: 61  ILQHSRIQLVVA--------NSELSAKSEIGRLIMKQNTVPDPIIQ--PQGGTTSSKNNN 120
           ILQ+SRIQL++A        N E S+ S+  +L +  NT  D  I+  P G  T S    
Sbjct: 61  ILQNSRIQLLLAPEPDKAQVNIEQSSPSKKIQLNLTDNTEIDVNIRSSPTGSGTGSA--- 120

Query: 121 NNNNNYSNSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFF 180
                 S  S +LK+MV PKC   KIP+EVN +DNV EL+KELQKL QR+HFHLP EG+F
Sbjct: 121 ---GAASTGSKRLKLMVLPKCETKKIPVEVNASDNVRELRKELQKLHQRLHFHLPQEGYF 180

Query: 181 FIYDRDVMDEDRSFRWH 188
           FIY ++VMDEDRSFRWH
Sbjct: 181 FIYKQNVMDEDRSFRWH 191

[Close]

BLAST of Clc01G22670 vs. TAIR 10
Match: AT4G05230.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-47
Identity = 104/192 (54.17%), Postives = 129/192 (67.19%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV F    G TF IE+G++DTVLEIK+KIEKYQ IP+ KQTL+F G VLQDH D+E C 
Sbjct: 1   MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQNTVPDPIIQPQGGTTSS-----KNNNNNNNN 120
           IL HSRIQL +++ + S ++ I     +Q    +   Q   G   S      +NNNNNNN
Sbjct: 61  ILNHSRIQLSISSPDQS-RNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNN 120

Query: 121 YSNSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPSEGFFFIYDR 180
                 KL+VMV PK G  KIP++VN  DNVGEL+KEL K+QQR    LP EG+FFIY +
Sbjct: 121 ----PKKLRVMVLPKSGTRKIPVDVNAGDNVGELRKELAKIQQRFQLSLPQEGYFFIYKQ 180

Query: 181 DVMDEDRSFRWH 188
           +VMDE+RSFRWH
Sbjct: 181 NVMDENRSFRWH 187

[Close]

BLAST of Clc01G22670 vs. TAIR 10
Match: AT4G05250.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.8e-20
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 1  MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
          MDV F  + GD F IE+G++DT+LEIKEKIEKYQ IP+ KQTLIF G VLQDH D++ C 
Sbjct: 1  MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCV 60

Query: 61 ILQHSRIQLVV 72
          IL HS IQ+ V
Sbjct: 61 ILNHSHIQIFV 71

[Close]

BLAST of Clc01G22670 vs. TAIR 10
Match: AT4G03370.1 (Ubiquitin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 9.8e-19
Identity = 73/254 (28.74%), Postives = 111/254 (43.70%), Query Frame = 0


Query: 8   EKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCEILQHSRI 67
           E G TF I++G  DTVL  K KIE  Q IP+ +QT+ F G++L+DH D+   +ILQ+  +
Sbjct: 8   ESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLL 67

Query: 68  QLVVANSE--------LSAKSEIGRLIMKQNTVPD------------PIIQPQGGTTSSK 127
            L ++  +         S  + I   +  Q++  D            P + P+    +++
Sbjct: 68  HLSISPDDNPTQNQVPQSPSNPIHEFVKNQDSAEDKKNPVLLHQTGKPPLPPKSSPLTTE 127

Query: 128 NNNNN-----------------------------------NNNYSNSSS----------- 185
           N + N                                    N  S+SS            
Sbjct: 128 NFSKNQHDRPVITKMVPELLGPQGTSPVTVGRRRNRDQEVQNRVSSSSDSVKEVINIPDT 187

[Close]

BLAST of Clc01G22670 vs. TAIR 10
Match: AT4G05260.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 7.1e-17
Identity = 74/245 (30.20%), Postives = 110/245 (44.90%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           MDV F  + G  F IE+G++DTVLEIK+KIEKYQ IP+P QTL F G  L+DH D+  C+
Sbjct: 1   MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 60

Query: 61  ILQHSRIQLV-------------------------------------------------- 120
           ILQ+S + L                                                   
Sbjct: 61  ILQNSHVVLFVLPDPNDNNDQVLQTEEQPPIIGDLIYGEDLPLTTEVVLNIRPFCPVQDS 120

Query: 121 -VANSELSAKSEIGRLIMKQNTVPDPIIQPQGGTTSSKNNNNNNNNYSNSSSK--LKVMV 180
            V N++ S  S+  + I+K +   D  ++    T  S +   N N   +   K  L + V
Sbjct: 121 PVRNNDQSPPSDAAKDIIKGH--QDSPVRNNEQTPPSDSVKENTNIQDSPVGKIILTLRV 180

Query: 181 KPKCGNSKIPMEVN----PTDNVGELKKELQKLQQRMHFHLPSEG-FFFIYDRDVMDEDR 188
            P  G  K    ++     T  V  L++EL + + R H   P +G +FF++   V++ED+
Sbjct: 181 MPYSGKIKAAKNLHFITYKTYRVKMLRQELVQNELRDHLDRPQDGDYFFVHKGRVLNEDQ 240

[Close]

BLAST of Clc01G22670 vs. TAIR 10
Match: AT4G02950.1 (Ubiquitin family protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-15
Identity = 73/264 (27.65%), Postives = 116/264 (43.94%), Query Frame = 0


Query: 1   MDVIFVPEKGDTFGIEVGFFDTVLEIKEKIEKYQGIPIPKQTLIFNGRVLQDHRDVEFCE 60
           + VI   + G +F I+V F+DTVL IK KIE  QG P+ KQ LIF  +VLQDH ++  C+
Sbjct: 36  ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95

Query: 61  ILQHSRIQLVVANSELSAKSEIGRLIMKQNTVPDPI----------IQPQGGTTS----S 120
           I  +SRI L ++  +   ++++ +     +T  +PI          + PQ    +    S
Sbjct: 96  IRHNSRILLSISPDDNPTQNQVPQTNQSPSTPSNPIHEFVNNQDSPLSPQSSALTMEKFS 155

Query: 121 KN----------------NNNNNNNYS--------------------------------- 180
           KN                N ++  +YS                                 
Sbjct: 156 KNQQDRPPLMRVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRNRDQEVKNRESSPS 215

Query: 181 -----------NSSSKLKVMVKPKCGNSKIPMEVNPTDNVGELKKELQKLQQRMHFHLPS 189
                      + + K+ VM++P      I +EV   DNV EL+KEL K+Q+R   +LP 
Sbjct: 216 DSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQERGELNLPQ 275

The following BLAST results are available for this feature:

BLAST of Clc01G22670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134970.1	6.5e-81	84.21	ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus] >KAE8647664.1 hyp...	[more]
XP_038881479.1	6.5e-81	83.16	ubiquitin domain-containing protein 7SL RNA1-like [Benincasa hispida]	[more]
XP_008439960.1	1.8e-78	81.68	PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo]	[more]
XP_022950206.1	2.2e-60	60.00	biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata]	[more]
XP_023543067.1	2.8e-60	60.09	biquitin domain-containing protein 7SL RNA1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc01G22670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT95	2.3e-12	27.60	Ubiquitin domain-containing protein 7SL RNA1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9ZQZ6	5.6e-11	27.31	Ubiquitin domain-containing protein 7SL RNA2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q58G87	2.3e-04	33.33	Polyubiquitin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=UBQ3 PE=2 SV=2	[more]
P59669	3.0e-04	33.33	Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2	[more]
P48510	3.9e-04	32.50	Ubiquitin domain-containing protein DSK2 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Clc01G22670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZZ9	8.6e-79	81.68	uncharacterized protein LOC103484590 OS=Cucumis melo OX=3656 GN=LOC103484590 PE=...	[more]
A0A6J1GE65	1.1e-60	60.00	biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IPZ4	8.9e-60	57.56	biquitin domain-containing protein 7SL RNA1-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1CMB8	2.3e-55	55.23	actin-related protein 8-like OS=Momordica charantia OX=3673 GN=LOC111012442 PE=4...	[more]
A0A6P5WYL1	6.2e-53	59.90	probable ubiquitin receptor RAD23 isoform X2 OS=Durio zibethinus OX=66656 GN=LOC...	[more]

BLAST of Clc01G22670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05230.1	1.3e-47	54.17	Ubiquitin-like superfamily protein	[more]
AT4G05250.1	6.8e-20	64.79	Ubiquitin-like superfamily protein	[more]
AT4G03370.1	9.8e-19	28.74	Ubiquitin family protein	[more]
AT4G05260.1	7.1e-17	30.20	Ubiquitin-like superfamily protein	[more]
AT4G02950.1	1.3e-15	27.65	Ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 1.5E-12 score: 57.7
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 4..72 e-value: 1.9E-16 score: 59.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..71 score: 16.254545
None	No IPR available	GENE3D	3.10.20.90		coord: 1..70 e-value: 2.2E-16 score: 61.5
None	No IPR available	GENE3D	3.10.20.90		coord: 97..191 e-value: 6.1E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..120
None	No IPR available	PANTHER	PTHR10621:SF38	UBIQUITIN DOMAIN-CONTAINING PROTEIN 7SL RNA1-RELATED	coord: 1..75
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 104..188
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..75
None	No IPR available	PANTHER	PTHR10621:SF38	UBIQUITIN DOMAIN-CONTAINING PROTEIN 7SL RNA1-RELATED	coord: 104..188
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 4..70 e-value: 5.4973E-14 score: 64.1546
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 3..71
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 113..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G22670.2	Clc01G22670.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding