Clc01G16410 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G16410
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	nuclear pore complex protein NUP58-like
Location	ClcChr01: 29198241 .. 29204655 (+)
RNA-Seq Expression	Clc01G16410
Synteny	Clc01G16410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCGAATGTCCATCAGAAAATTTGAAACGAAGGTGAGCTCTCAAATTTCCCTCTCTAGGGTTTTGGAAGAGGGTTCACCATTTCGCACTCCCAAATCAACTATCTGAACTGAACCAGTTTCAAGTTGGTGAAGTGCCTTCTCACTCCCACGAAGCAAGTGCAGAATCACAATGGCGTTTTCTCTCTTCTCAACTCCGCAACCGCAGCAGCCTCAGCAGTTATTTCAACCACAACCGCAACTTTTTCAGCAGAGCAGTCCATTATTCTCACAGCAGCCGCAACAATTTCAACTGCAACAGCAGCAACAGCAACAACAGCAACAACAACAACAACAGCAGCAGTTAATGCAGCAACAGCAACCGCAACAGCAGCAGTTGTTCATTTTTACTAACGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGATCTCCATCCAGATTCGCAGAAAATTCTCCTTCAGATCGAGTATGTGCTTTTCTAGTCTCTTTGAAACTTGTTGCGCAGTCTTGTTTTTAGTTTAGTTGTATGGGCAGAAGTTTAAAAAATCTTGGGCAAAAAGTAATATTTGAAGTATTTGATGGTTTTCTGATTATAAATGTTTCTTTCTACTCAAGCAAAATTCTTGGTCGTTTATTTATTGTTTTCCTTTCTCTTTTATGAATTCTCATCTTCTTGTTTGTAACTAGGGTTTGAACGCTTTATAATTTTCCATATTATATGGCTATTTAGATAATGTGTCGCTACAGGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGCTTGATGCAAGTCGAATTGTTCAGGTTACTTTTGACACTATCAGCTTGCTTTTCCTTTCCGTTCTGACTTCACATCGAATAACTATTGGAAAGTTGAGCATACTGAAAATATATTTGTGGGTACTGAGATGTTCAAGTGAAAATGCATGCAGCTTCAGTCTATTTTGCACGTTTGTTGTCAACTAGAAAGACGTATGAGTAATTGAAAGTTGGTACAAAAAAGGTCAAAAGGTTAAGGGATTACAAGTTCAATCCATGGTGTCTACCTACCTATAATTTAATATCCTATGGATTTTCTTGACACCTAAATGTTGTAGAGTCAGACAGTTTGTCTTGTGAGATTAGTCGAGGTGCACGTAAGTGGGCACAAACACTCATGGATATTAAAAAAAAAAAAAATTTGAAAAAGTGGGTGTAACTTGTTTTGGACAATAGGTTTACATATGATATTCAACAGCTAACACCTAAAGTTTGCTTCTTATCTTTTTCTTTAACCTCTTGGATAAATCAGTTCTTTTATTTTTTTTAATTACGTCCTTTTATCTCAGGACTGACCATTTAATACTTGCCGTACAGAAAGGGTATGGTAAGTGAAACATTCCCATTGAGCAAATAGATTGGAAGTGGGATTTTTTAAAAGTTGTTGAAATTGATTTTGTGGTTCTGAACACTTTTCCATTTGGCCCTTACCTTATATTTCTGGTGAATGAATGAGTGATATGTTACTTGGAAGAAAGATGGTTATCCACGAATGACATATTCATTACCCAATGGATCTTTATTTACCCACTTCTTTCCTATGGACTTGGAAGGAGGTATCTTATTCCAAGGAAAAAAAAAACATAAGGGAGGGATCCCTCTATCCCTTCATTTTCTGTTGGAAGAGGTGCTTGTTAATTTTGTAGCTGAAGGAAGAAAGGTCCACAGAAAAACCTGTGTACTATTTACTACATGAGGGAGGGATCCCTCTATCCTTTCATTTTAATGTTCAACCTCTAAAGCATTTCAGAGAAATTATTTGTTTCAGAGTTCTATAGTATTGAGCTGAACATCTGCCAACCACAATGATGCATTTGGTTTTACTTTTGATGCATGTTTATTGATTTTTATATGGTAAAATTGTGGGATTATTTGAAATGGTTAAATATTCCTTGTCAGGAACTTGGGGGAATTAGTGTGTCTACAGAACATCAAAAAGTAATGCTTCAAGAACTGATGACTGCTGCGAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATAAGAGTGCAGGAGGGTCCAATCCCACTGCACCTTCACAGGTTCCTGGAGCAACATTGCCACTAGGTTCTAGTGGTCAACCAACATCTACCACGATTGCTCCAGTTTTTGACTTCTACAGTGGGCTCCCAAGTAAACCATCTCCGTTTTTGCTGCAAACTGTTTCAAGATTCGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGCAGACTTAGAGCAACTTCTTGTCCTAGATTCCAATAGAAGTGCTTCCAATTCTAGTCCCTCATTGTTTCAATCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGGTAGGAGAAATGTTGTCCTTAATGGGCATTAACTTGAGAAAATGCACTGGGAATCTTTGAAATGGTTGTCTATAGGTTCAAATATTCTCTTTGTAGGTTGTCTGACATGTCTCAATTGATATCAAAATACCTGTTTCTTATTATTCAAGGTGATTTCTGAAAATGATTGAAATAAGTTGGTCATCAAAGTGTATATGTTAGTAATAAAATGTAAATTTGAGGCCGGTTCTTGATGTTAAGTTTGACTTAAATTCTTATAGCCTGGATGGAAACAGAGTCTAGAATTGTTTTCAGAGCAAGAGAATTCTTCATCTGATCTACATCTGCATGATCTCACAGGAGAGAGTAGGATGCTACACGTGCACATTCTTATAGCTAACAGGTTAAAAATTATCCCTCAGGTTGAGAGCATTCACCAGTACATTGAATCAATGAAGACAGCTTATCTTGCTGACCAGCGTCGCAGGGGGGATGTAAACAATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGGCAAGAAGCGGCAGCTAAGAGGGTACATCCAACCTTACATTTGCCTGCAAATTCACAACCATCAACTCAAGCTGCTGGATTACTTACCAGCTCAGGTAACCATGGTGCATCAACAATACAACAATTGTCTACAGTAGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCCTCTCTTTTCATGACACCAACAACATCTGTTCAAACATCCTCTTTGTTTAGTTCTTCTGGTGCAACAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCAATGTTTAGTTCTGCCAATACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTGTTTTCAACACCCTTTGCTTCAGGTAGTTTCTTGATATTCTTTATTTGTTTAAATGTATTTCTTACTATAGTACTTAGCTTATTGCTTATTAATAATAGTCAATCACCTGTTACCTAGCCTTGCACCAAAATGTTAGGTAACATCTGTTTGGGATGCTTTGGGAAACTTGCAAAAAGAGAAAAAAAGGAATACCCCAAAATCCACATCAATAATACCCTCGTTGGTGCCTCCTTCTACGAGACTTGTGCCTGGTTTGTCTCTGAGGGCGCAATTAATATTTTAATAAAGGAAATAATGATCCATATGGTAGGAATGCCACTAGATAGATAGAGATGTTATTATGGTATCAAGGTTACATTAGTAATTAGCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGCGCTAGAGGCAAGTGGGGGAGGAGAGGAAGCTAGTTTGAATAATATGTTAGCATTTTGTCATTTGATCTTTTTATTAGAATTTTCTATCCCAGCAGCCTTTTCTATTTTGAACTTGCAGTTTTATCATTATTATTTAAGCAGGGCTTAATATCAATCTATTGGAGTTGTATTTATCTTGAGAGATCATCTGGATCAATTGTTGTTGCCTTGCATTTGGACAAGCTTGTTTCTGTACAAATTGTCAACAAGTTATAATTCTTACAATCACCATGTGTTGGCCCTACAGTCAACTTTTATAAGTTTTGATAAGAGAAATTGTATTGTGGGTATGGGTTCAAATTTTGATGGTGGTAAATCAGGATATTAACTAGTTTTACCTTTCACTTTTTCAAATTTATATTTTTTTTCTTCTTTTCGAAATAGTAGAGTTGGGCGTTCGATAAAATTAAAGCAGTTGTTCATATCTAAAAAAAAAAGGGAGAAAGATACTCTTCTGGTCTTTGGAACTTGTGGATCCTTTTGTTATAGTTCTTGCATTTGAAATGTCCCAATTTAGTATTTATACTTTCAATAAATCTTAAAATTAGTCTAGTTTATGGTTAACTTTTTTGAAAACAATTTAGCCTCAGTTTTACCTATACATTTTGGAAATATTTTTTAAGCAGTGGTTTATTTTGAATGGAAATTATTAATATTATTTTAATGTTTGCTAAATTCGATAAAAGTTTATCTCAGTAACAATAAAGTTAATTTCAGAGTGCGAAAATTAGATTTGGACAAATAGAATGAGCCTACTTTAACCTTAAATTAATCTAATACATGTAAATAAACTTTAACACTTACGGTTGCTGGGAAATAGGTTAACTGATTTGACATGGTTTCCTTCTCTGAAGTGAAGACATCATTACTACCAAGAACATGCCTGATTTGAGTTTTTGATTGACCTGACGTAGGAGGAATATAACTGTTACTTGATGTTGATTGGTACGCTCCCCAGTTAGCAGTTGCTTGATTGGATCTGTTTGTAACGATGGCTTGTACTGTTTTTCATAGGTGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGGTGAGTTAATTTTTTTTCATATCAGGTTTTGGTCCTTCGGTTTATTAAATTTATTATTATTTTACCGAAGTTTGGAGCACTACTAGTCTACTACTCTTTCGTCTTTAACTCAAGGTGTAACATTCATGGTTTCTCCTTGGCCCTTCTGCTTATGAATCAAAGATCTATTGAGGTTGTATAGGGTTGCGTGTCTATGTAGAGAATATAAAATCTCATGCTTATACGCAGTAAATTTGCTTGGTAGGTGTGCACTATATAACTCATCTTATTTTATTGCAGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGACGCTACTGACTAAATGACCATGTGAGAGTATTACCAGCCAGAAGTAACAACTGATGAAAAAAATAGCCAAACATTATGAAAAACCTCGGCCTATATCTCCGAGGAGAGGCCAATTTCTTAGTCATCGACAGTTTAAAGTCAGATAATATTCCACAAGCAGTAAAAAAGCCTATTGGTATCTGAATCTTTCCTGCAAAGTGAGGGAAATTGCAATGTTTTCTCAAAACATCCGCCATTGCTCATCACTTTCTGAAAGAGATCGGTGAGGTGACGTGAGAATTTTGTGCAACTCTGTAGAATACAACATAGGTGCGATCAAATCTTGTTTATGAAAACTCTTTATGAAAACTCAAAGAACGAGACTTGTTTTTCTTGTGATGCGATGATTAATTCGGGCCTGCTGTACAGAATATTTGAGTTGCGGTTTCAGGGAACAAGAATATGCTTAAATGGGAGCTTTTACATCCAAAAGGTCGAGTGTTTATCGGATATTCTTCTTGGACCTGTGGCTGCTTCACAGCGGCCGTCGGGATTGGTAAGTTTACAGCATGTTTTAAATTTATATACTTGAACTATTTACATCGCATCACTTGTGTAATTTGTGTACTGAATTTTTGGTGAGTTTTCATACTTCTTTTTTAAACCCCAAATATATTTATAATTTTTCCTTTTTTATTTGATGTCACGTTTTCACTAAAATGGCATTTTGTAATTTAATTGTGTAATGTATTCAGGGGAATTTCTGGTGTTTAATTATTTTGATTTAAATCTCCTATTTGTTTCTTGAAGGGCTGGGAATTTATGTCCATCCAAATTAGAGCTCACTGTTTGACCTAATACCTCAAATAATATCATGCATTTGTGTACTGTGGCTCCACAAATATCGTATTTTTGGCCCTAGGCCTTAGCGGCCACACAGTCAACACCTCTCAAACTCCCAGAGAAATTATAGGATGTGGCTAATTACAATGTGCTTGATAATTCTATTTCTGTAGAGAAATTAGAAAATTACGTCAAATTTGTATCGAGTCTTATTAGCCGTTTCAATTATTTTTCTCATCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCATATTAATTCAACCTGAAATTTTATTTCTGTACAAATCCCAATGATTCACTAATATATCTCTAATAAATGAAAGTTTTATTGGAATTTGAAGCATACATACGAATGCTGTGATGTAAAAATAG

mRNA sequence

GGGCGAATGTCCATCAGAAAATTTGAAACGAAGGTGAGCTCTCAAATTTCCCTCTCTAGGGTTTTGGAAGAGGGTTCACCATTTCGCACTCCCAAATCAACTATCTGAACTGAACCAGTTTCAAGTTGGTGAAGTGCCTTCTCACTCCCACGAAGCAAGTGCAGAATCACAATGGCGTTTTCTCTCTTCTCAACTCCGCAACCGCAGCAGCCTCAGCAGTTATTTCAACCACAACCGCAACTTTTTCAGCAGAGCAGTCCATTATTCTCACAGCAGCCGCAACAATTTCAACTGCAACAGCAGCAACAGCAACAACAGCAACAACAACAACAACAGCAGCAGTTAATGCAGCAACAGCAACCGCAACAGCAGCAGTTGTTCATTTTTACTAACGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGATCTCCATCCAGATTCGCAGAAAATTCTCCTTCAGATCGAGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGCTTGATGCAAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTGTGTCTACAGAACATCAAAAAGTAATGCTTCAAGAACTGATGACTGCTGCGAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATAAGAGTGCAGGAGGGTCCAATCCCACTGCACCTTCACAGGTTCCTGGAGCAACATTGCCACTAGGTTCTAGTGGTCAACCAACATCTACCACGATTGCTCCAGTTTTTGACTTCTACAGTGGGCTCCCAAGTAAACCATCTCCGTTTTTGCTGCAAACTGTTTCAAGATTCGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGCAGACTTAGAGCAACTTCTTGTCCTAGATTCCAATAGAAGTGCTTCCAATTCTAGTCCCTCATTGTTTCAATCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGCCTGGATGGAAACAGAGTCTAGAATTGTTTTCAGAGCAAGAGAATTCTTCATCTGATCTACATCTGCATGATCTCACAGGAGAGAGTAGGATGCTACACGTGCACATTCTTATAGCTAACAGGTTAAAAATTATCCCTCAGGTTGAGAGCATTCACCAGTACATTGAATCAATGAAGACAGCTTATCTTGCTGACCAGCGTCGCAGGGGGGATGTAAACAATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGGCAAGAAGCGGCAGCTAAGAGGGTACATCCAACCTTACATTTGCCTGCAAATTCACAACCATCAACTCAAGCTGCTGGATTACTTACCAGCTCAGGTAACCATGGTGCATCAACAATACAACAATTGTCTACAGTAGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCCTCTCTTTTCATGACACCAACAACATCTGTTCAAACATCCTCTTTGTTTAGTTCTTCTGGTGCAACAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCAATGTTTAGTTCTGCCAATACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTGTTTTCAACACCCTTTGCTTCAGGTGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGACGCTACTGACTAAATGACCATGTGAGAGTATTACCAGCCAGAAGTAACAACTGATGAAAAAAATAGCCAAACATTATGAAAAACCTCGGCCTATATCTCCGAGGAGAGGCCAATTTCTTAGTCATCGACAGTTTAAAGTCAGATAATATTCCACAAGCAGTAAAAAAGCCTATTGGTATCTGAATCTTTCCTGCAAAGTGAGGGAAATTGCAATGTTTTCTCAAAACATCCGCCATTGCTCATCACTTTCTGAAAGAGATCGGTGAGGTGACGTGAGAATTTTGTGCAACTCTGTAGAATACAACATAGAATATTTGAGTTGCGGTTTCAGGGAACAAGAATATGCTTAAATGGGAGCTTTTACATCCAAAAGGTCGAGTGTTTATCGGATATTCTTCTTGGACCTGTGGCTGCTTCACAGCGGCCGTCGGGATTGGTAAGTTTACAGCATGTTTTAAATTTATATACTTGAACTATTTACATCGCATCACTTGTGTAATTTGTGTACTGAATTTTTGGTGAGTTTTCATACTTCTTTTTTAAACCCCAAATATATTTATAATTTTTCCTTTTTTATTTGATGTCACGTTTTCACTAAAATGGCATTTTGTAATTTAATTGTGTAATGTATTCAGGGGAATTTCTGGTGTTTAATTATTTTGATTTAAATCTCCTATTTGTTTCTTGAAGGGCTGGGAATTTATGTCCATCCAAATTAGAGCTCACTGTTTGACCTAATACCTCAAATAATATCATGCATTTGTGTACTGTGGCTCCACAAATATCGTATTTTTGGCCCTAGGCCTTAGCGGCCACACAGTCAACACCTCTCAAACTCCCAGAGAAATTATAGGATGTGGCTAATTACAATGTGCTTGATAATTCTATTTCTGTAGAGAAATTAGAAAATTACGTCAAATTTGTATCGAGTCTTATTAGCCGTTTCAATTATTTTTCTCATCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCATATTAATTCAACCTGAAATTTTATTTCTGTACAAATCCCAATGATTCACTAATATATCTCTAATAAATGAAAGTTTTATTGGAATTTGAAGCATACATACGAATGCTGTGATGTAAAAATAG

Coding sequence (CDS)

ATGGCGTTTTCTCTCTTCTCAACTCCGCAACCGCAGCAGCCTCAGCAGTTATTTCAACCACAACCGCAACTTTTTCAGCAGAGCAGTCCATTATTCTCACAGCAGCCGCAACAATTTCAACTGCAACAGCAGCAACAGCAACAACAGCAACAACAACAACAACAGCAGCAGTTAATGCAGCAACAGCAACCGCAACAGCAGCAGTTGTTCATTTTTACTAACGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCGGATCTCCATCCAGATTCGCAGAAAATTCTCCTTCAGATCGAGGAACGAATCTTGGAGTATCGGGATGAAAGTCAGAGGCTGGATCAGTGTAGTCGCCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGCTTGATGCAAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTGTGTCTACAGAACATCAAAAAGTAATGCTTCAAGAACTGATGACTGCTGCGAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGCCCAAGGTTCCTTCATAAGAGTGCAGGAGGGTCCAATCCCACTGCACCTTCACAGGTTCCTGGAGCAACATTGCCACTAGGTTCTAGTGGTCAACCAACATCTACCACGATTGCTCCAGTTTTTGACTTCTACAGTGGGCTCCCAAGTAAACCATCTCCGTTTTTGCTGCAAACTGTTTCAAGATTCGAGAAGTATCTTGGTGAATGTCGCCAGTGGATTGCAGACTTAGAGCAACTTCTTGTCCTAGATTCCAATAGAAGTGCTTCCAATTCTAGTCCCTCATTGTTTCAATCACTTCCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTGCCAAGCCTGGATGGAAACAGAGTCTAGAATTGTTTTCAGAGCAAGAGAATTCTTCATCTGATCTACATCTGCATGATCTCACAGGAGAGAGTAGGATGCTACACGTGCACATTCTTATAGCTAACAGGTTAAAAATTATCCCTCAGGTTGAGAGCATTCACCAGTACATTGAATCAATGAAGACAGCTTATCTTGCTGACCAGCGTCGCAGGGGGGATGTAAACAATCCATTTCTTGAGGCTGATCGAAGGGAAACTGCACGGCAAGAAGCGGCAGCTAAGAGGGTACATCCAACCTTACATTTGCCTGCAAATTCACAACCATCAACTCAAGCTGCTGGATTACTTACCAGCTCAGGTAACCATGGTGCATCAACAATACAACAATTGTCTACAGTAGCTACACCAGCTTCTTCCGGTGGTGGATTGTCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCCTCTCTTTTCATGACACCAACAACATCTGTTCAAACATCCTCTTTGTTTAGTTCTTCTGGTGCAACAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCAATGTTTAGTTCTGCCAATACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTGTTTTCAACACCCTTTGCTTCAGGTGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGACGCTACTGA

Protein sequence

MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIRPRFLHKSAGGSNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSRTARRY

Homology

[Close]

BLAST of Clc01G16410 vs. NCBI nr
Match: XP_038882193.1 (nuclear pore complex protein NUP58 [Benincasa hispida])

HSP 1 Score: 815.8 bits (2106), Expect = 2.2e-232
Identity = 473/545 (86.79%), Postives = 479/545 (87.89%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQLMQ 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQ   
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQQQL 60

Query: 61  QQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLY 120
            QQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLY
Sbjct: 61  MQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLY 120

Query: 121 DSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIRP 180
           DSSVSNDGFELDASRIVQELGGIS STEHQK+MLQELMTAAKEMLWNTEVAIRSFMMIRP
Sbjct: 121 DSSVSNDGFELDASRIVQELGGISASTEHQKIMLQELMTAAKEMLWNTEVAIRSFMMIRP 180

Query: 181 RFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTVS 240
           RFLH+SAGG SNPTAPSQV GAT PLGSSGQPTST+I PVFDFYSGLP KPSPFL QTVS
Sbjct: 181 RFLHQSAGGASNPTAPSQVTGATSPLGSSGQPTSTSITPVFDFYSGLPRKPSPFLQQTVS 240

Query: 241 RFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGWK 300
           RFEKYLGECRQWI DLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAK    
Sbjct: 241 RFEKYLGECRQWIEDLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAK---- 300

Query: 301 QSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYLA 360
                                                      VESIHQYIESMKTAYLA
Sbjct: 301 -------------------------------------------VESIHQYIESMKTAYLA 360

Query: 361 DQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGAST 420
           DQRRRGD NNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLL+SSGNHGAST
Sbjct: 361 DQRRRGDGNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLSSSGNHGAST 420

Query: 421 IQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLFG 480
            QQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLFSSSGA AP+TLFG
Sbjct: 421 AQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFSSSGAAAPTTLFG 480

Query: 481 SSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSR 540
           SSSAP+FSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSR
Sbjct: 481 SSSAPLFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSR 498

Query: 541 TARRY 545
           TARRY
Sbjct: 541 TARRY 498

[Close]

BLAST of Clc01G16410 vs. NCBI nr
Match: XP_004141933.1 (nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical protein Csa_004153 [Cucumis sativus])

HSP 1 Score: 797.0 bits (2057), Expect = 1.0e-226
Identity = 467/551 (84.75%), Postives = 475/551 (86.21%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQL-----QQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFS QQPQQFQL     QQQQQQQQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60

Query: 61  QQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
           QQQLMQQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPF 240
           FMMIRPRFLH+SAGG SNPTAPSQVPGAT PLGSSGQPTST+IAPVFDFYSGLP KPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVA 300
           L QTVSRFEKYL ECRQWI DLEQLLVLDSNRSASNSS SLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 AKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESM 360
           +K                                               VESIHQYIESM
Sbjct: 301 SK-----------------------------------------------VESIHQYIESM 360

Query: 361 KTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSG 420
           K+AYLADQRRRGD NNPFLEADRRETARQEAAAKR HPTLHLP NSQPSTQA GLL +SG
Sbjct: 361 KSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQPSTQATGLLANSG 420

Query: 421 NHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATA 480
           NHGAST+QQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS   A
Sbjct: 421 NHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSVAA 480

Query: 481 PSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 540
           PSTLFGSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS
Sbjct: 481 PSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 504

Query: 541 SKPKSRTARRY 545
           SKPKSRTARRY
Sbjct: 541 SKPKSRTARRY 504

[Close]

BLAST of Clc01G16410 vs. NCBI nr
Match: XP_008440230.1 (PREDICTED: nuclear pore complex protein NUP58 isoform X1 [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 9.1e-223
Identity = 464/546 (84.98%), Postives = 471/546 (86.26%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQLQQQQQQQQQQQQQQQQLM 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFS QQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120
           QQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL
Sbjct: 61  QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120

Query: 121 YDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIR 180
           YDSSVSNDGFELDASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRSFMMIR
Sbjct: 121 YDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIR 180

Query: 181 PRFLHKSA-GGSNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTV 240
           PRFLH+SA G SNPTAPSQV GAT PLG SGQPTST+IAPVFDFYSGLP KPSPFL QTV
Sbjct: 181 PRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTV 240

Query: 241 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 300
           SRFEKYLGECRQWI DLEQLL+LDSNRSASNSS SLFQSLPKIMSNVHEFFVHVAAK   
Sbjct: 241 SRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAK--- 300

Query: 301 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 360
                                                       VESIHQYIESMK+AYL
Sbjct: 301 --------------------------------------------VESIHQYIESMKSAYL 360

Query: 361 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGAS 420
           ADQRRRGD NNPFLEADRRETARQEAAAKR HPTLHLPANSQPSTQAAGLL +SGNHGAS
Sbjct: 361 ADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQPSTQAAGLLANSGNHGAS 420

Query: 421 TIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLF 480
           TIQQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS A APS LF
Sbjct: 421 TIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSAAAPS-LF 480

Query: 481 GSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS 540
           GSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS
Sbjct: 481 GSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS 496

Query: 541 RTARRY 545
           RTARRY
Sbjct: 541 RTARRY 496

[Close]

BLAST of Clc01G16410 vs. NCBI nr
Match: TYK12916.1 (nuclear pore complex protein NUP58 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 767.7 bits (1981), Expect = 6.8e-218
Identity = 454/535 (84.86%), Postives = 462/535 (86.36%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQLQQQQQQQQQQQQQQQQLM 60
           MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS QQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120
           QQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL
Sbjct: 61  QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120

Query: 121 YDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIR 180
           YDSSVSNDGFELDASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRSFMMIR
Sbjct: 121 YDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIR 180

Query: 181 PRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTV 240
           PRFLH+SAGG SNPTAPSQV GAT PLG SGQPTST+IAPVFDFYSGLP KPSPFL QTV
Sbjct: 181 PRFLHQSAGGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTV 240

Query: 241 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 300
           SRFEKYLGECRQWI DLEQLLVLDSNRSASNSS SLFQSLPKIMSNVHEFFVHVAAK   
Sbjct: 241 SRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAK--- 300

Query: 301 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 360
                                                       VESIHQYIESMK+AYL
Sbjct: 301 --------------------------------------------VESIHQYIESMKSAYL 360

Query: 361 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGAS 420
           ADQRRRGD NNPFLEADRRETARQEAAA+R HPTLHLPANSQPSTQAAGLL +SGNHGAS
Sbjct: 361 ADQRRRGDGNNPFLEADRRETARQEAAARRAHPTLHLPANSQPSTQAAGLLANSGNHGAS 420

Query: 421 TIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLF 480
           TIQQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS A APS LF
Sbjct: 421 TIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSAAAPS-LF 480

Query: 481 GSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 534
           GSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATS+S
Sbjct: 481 GSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSRS 485

[Close]

BLAST of Clc01G16410 vs. NCBI nr
Match: XP_023518567.1 (nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 757.7 bits (1955), Expect = 7.0e-215
Identity = 448/554 (80.87%), Postives = 464/554 (83.75%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QPQPQLFQQSSPLFSQQPQQFQLQQ-----QQQQQQQQ 60
           MAFSLFSTPQ QQPQQLF    Q QPQLFQQSS LFSQQPQQFQLQQ     QQQQQQQQ
Sbjct: 1   MAFSLFSTPQSQQPQQLFQSQPQSQPQLFQQSSSLFSQQPQQFQLQQQQQQLQQQQQQQQ 60

Query: 61  QQQQQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
           QQQQQQLMQQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61  QQQQQQLMQQQQ-QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120

Query: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVA 180
           RLDQCSRLYDSSVSNDGFELDASRIVQELGGIS STEHQKV+LQELMT+ K MLWNTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVA 180

Query: 181 IRSFMMIRPRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKP 240
           IRSFMMIRPRFLH+S GG +NP AP+QVPG T PLGSS QPTST+I PVFDFYSGLP KP
Sbjct: 181 IRSFMMIRPRFLHQSTGGATNPAAPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKP 240

Query: 241 SPFLLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFV 300
           SPFL QTVSRFEKYLGECRQWI +LEQLLV +SNRSASNS  SLF SLPKIMSNVHEFF+
Sbjct: 241 SPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFI 300

Query: 301 HVAAKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYI 360
           HVAAK                                               VESIHQYI
Sbjct: 301 HVAAK-----------------------------------------------VESIHQYI 360

Query: 361 ESMKTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLT 420
           +SMK AYLADQRRRGDVNNPFLEADRRETARQEA AKR HPTLHLPANSQPSTQA G+L 
Sbjct: 361 DSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPANSQPSTQATGVLA 420

Query: 421 SSGNHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSG 480
           SSGNHGAST  Q STVATPASS GGLSLFSTPSAP+T +SSLFMTPT SVQTSSLFSSSG
Sbjct: 421 SSGNHGASTAPQSSTVATPASSAGGLSLFSTPSAPATASSSLFMTPTASVQTSSLFSSSG 480

Query: 481 ATAPSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGAT 540
           A AP++LFGSSSAP+FSSANTPFGSTAPSFGQSASAG SLFSTPFASGAATGSGASFGAT
Sbjct: 481 AAAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASAGGSLFSTPFASGAATGSGASFGAT 506

Query: 541 SKSSKPKSRTARRY 545
           SKSSKPKSRTARRY
Sbjct: 541 SKSSKPKSRTARRY 506

[Close]

BLAST of Clc01G16410 vs. ExPASy Swiss-Prot
Match: Q8RWH9 (Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 5.0e-123
Identity = 302/548 (55.11%), Postives = 360/548 (65.69%), Query Frame = 0


Query: 4   SLFSTPQPQQPQQLF-QPQPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQLMQQQ 63
           S+FS  QPQQ   +F Q QP   QQ++ +FS QPQQ Q     Q QQ QQQQQQ   QQQ
Sbjct: 31  SIFSQSQPQQTNSIFSQSQP---QQTNSIFS-QPQQQQQTSLFQPQQFQQQQQQLNQQQQ 90

Query: 64  QPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 123
           Q  QQQL++FTNDKAPA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCSRLYDS
Sbjct: 91  QQVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDS 150

Query: 124 SVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIRPRF 183
           SVS++GFE DASRIVQELGGI+ + + QK +L ELM  AK+ML N E+A+RSFMM++PRF
Sbjct: 151 SVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRF 210

Query: 184 LHKSAGG---SNPTAPSQVPGATLPLGSSGQPTS-TTIAPVFDFYSGLPSKPSPFLLQTV 243
            H   GG   S  + PSQ  G      SSGQ  + TT   V DFY G+P KP+ FLLQTV
Sbjct: 211 PHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTV 270

Query: 244 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 303
            RFEKYL ECRQW+ +LEQLL LDS++ + ++  SL +SLPK+MSNVH+FFVHVAAK   
Sbjct: 271 VRFEKYLNECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAK--- 330

Query: 304 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 363
                                                       VESIHQYIESM+T+YL
Sbjct: 331 --------------------------------------------VESIHQYIESMRTSYL 390

Query: 364 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPA---NSQPSTQAAGLLTSSGNH 423
           ADQRRRG+ ++PFLEADRRETA+QEAAAKRVHPTLHLPA   ++QPSTQ AGL+ SS   
Sbjct: 391 ADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQVAGLIASSATP 450

Query: 424 GASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPS 483
           G S   Q S   +  SSG G S  +TP+  S  +SSLF TP+++  TSSLF  S     +
Sbjct: 451 GGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAPTSSLFGPSPTPTQT 510

Query: 484 TLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSK 543
            LFGSS A  F S  + FG T PS    +  G          GA  GSGASFG+ +KSS+
Sbjct: 511 PLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG----------GATPGSGASFGSMTKSSR 513

[Close]

BLAST of Clc01G16410 vs. ExPASy TrEMBL
Match: A0A0A0KI61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 5.0e-227
Identity = 467/551 (84.75%), Postives = 475/551 (86.21%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQL-----QQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFS QQPQQFQL     QQQQQQQQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60

Query: 61  QQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
           QQQLMQQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPF 240
           FMMIRPRFLH+SAGG SNPTAPSQVPGAT PLGSSGQPTST+IAPVFDFYSGLP KPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVA 300
           L QTVSRFEKYL ECRQWI DLEQLLVLDSNRSASNSS SLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 AKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESM 360
           +K                                               VESIHQYIESM
Sbjct: 301 SK-----------------------------------------------VESIHQYIESM 360

Query: 361 KTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSG 420
           K+AYLADQRRRGD NNPFLEADRRETARQEAAAKR HPTLHLP NSQPSTQA GLL +SG
Sbjct: 361 KSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQPSTQATGLLANSG 420

Query: 421 NHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATA 480
           NHGAST+QQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS   A
Sbjct: 421 NHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSVAA 480

Query: 481 PSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 540
           PSTLFGSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS
Sbjct: 481 PSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 504

Query: 541 SKPKSRTARRY 545
           SKPKSRTARRY
Sbjct: 541 SKPKSRTARRY 504

[Close]

BLAST of Clc01G16410 vs. ExPASy TrEMBL
Match: A0A1S3B190 (nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484746 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 4.4e-223
Identity = 464/546 (84.98%), Postives = 471/546 (86.26%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQLQQQQQQQQQQQQQQQQLM 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFS QQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120
           QQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL
Sbjct: 61  QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120

Query: 121 YDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIR 180
           YDSSVSNDGFELDASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRSFMMIR
Sbjct: 121 YDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIR 180

Query: 181 PRFLHKSA-GGSNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTV 240
           PRFLH+SA G SNPTAPSQV GAT PLG SGQPTST+IAPVFDFYSGLP KPSPFL QTV
Sbjct: 181 PRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTV 240

Query: 241 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 300
           SRFEKYLGECRQWI DLEQLL+LDSNRSASNSS SLFQSLPKIMSNVHEFFVHVAAK   
Sbjct: 241 SRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAK--- 300

Query: 301 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 360
                                                       VESIHQYIESMK+AYL
Sbjct: 301 --------------------------------------------VESIHQYIESMKSAYL 360

Query: 361 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGAS 420
           ADQRRRGD NNPFLEADRRETARQEAAAKR HPTLHLPANSQPSTQAAGLL +SGNHGAS
Sbjct: 361 ADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQPSTQAAGLLANSGNHGAS 420

Query: 421 TIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLF 480
           TIQQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS A APS LF
Sbjct: 421 TIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSAAAPS-LF 480

Query: 481 GSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS 540
           GSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS
Sbjct: 481 GSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKS 496

Query: 541 RTARRY 545
           RTARRY
Sbjct: 541 RTARRY 496

[Close]

BLAST of Clc01G16410 vs. ExPASy TrEMBL
Match: A0A5D3CR89 (Nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005110 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 3.3e-218
Identity = 454/535 (84.86%), Postives = 462/535 (86.36%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS-QQPQQFQLQQQQQQQQQQQQQQQQLM 60
           MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFS QQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120
           QQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL
Sbjct: 61  QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRL 120

Query: 121 YDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIR 180
           YDSSVSNDGFELDASRIVQELGGIS STEHQKVMLQELM AAKEMLWNTEVAIRSFMMIR
Sbjct: 121 YDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIR 180

Query: 181 PRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKPSPFLLQTV 240
           PRFLH+SAGG SNPTAPSQV GAT PLG SGQPTST+IAPVFDFYSGLP KPSPFL QTV
Sbjct: 181 PRFLHQSAGGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTV 240

Query: 241 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 300
           SRFEKYLGECRQWI DLEQLLVLDSNRSASNSS SLFQSLPKIMSNVHEFFVHVAAK   
Sbjct: 241 SRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVAAK--- 300

Query: 301 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 360
                                                       VESIHQYIESMK+AYL
Sbjct: 301 --------------------------------------------VESIHQYIESMKSAYL 360

Query: 361 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLTSSGNHGAS 420
           ADQRRRGD NNPFLEADRRETARQEAAA+R HPTLHLPANSQPSTQAAGLL +SGNHGAS
Sbjct: 361 ADQRRRGDGNNPFLEADRRETARQEAAARRAHPTLHLPANSQPSTQAAGLLANSGNHGAS 420

Query: 421 TIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPSTLF 480
           TIQQ STVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT SVQTSSLF SS A APS LF
Sbjct: 421 TIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSAAAPS-LF 480

Query: 481 GSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKS 534
           GSSSAP+FSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATS+S
Sbjct: 481 GSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSRS 485

[Close]

BLAST of Clc01G16410 vs. ExPASy TrEMBL
Match: A0A6J1HHG2 (nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC111463519 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 2.2e-214
Identity = 446/554 (80.51%), Postives = 463/554 (83.57%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QPQPQLFQQSSPLFSQQPQQFQLQQQ-----QQQQQQQ 60
           MAFSLFSTPQPQQPQQLF    Q QPQLFQQSS LFSQQPQQFQLQQQ     QQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQPQQFQLQQQQQQQLQQQQQQQ 60

Query: 61  QQQQQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120
           QQQQQQLMQQQQ QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ
Sbjct: 61  QQQQQQLMQQQQ-QQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQ 120

Query: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVA 180
           RLDQCSRLYDSSVSNDGFELDASRIVQELGGIS STEHQKV+LQELMT+ K MLWNTEVA
Sbjct: 121 RLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEVA 180

Query: 181 IRSFMMIRPRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPSKP 240
           IRSFMMI PRFLH+S GG +NP  P+QVPG T PLGSS QPTST+I PVFDFYSGLP KP
Sbjct: 181 IRSFMMICPRFLHQSTGGATNPAVPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKKP 240

Query: 241 SPFLLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFV 300
           SPFL QTVSRFEKYLGECRQWI +LEQLLV +SNRSASNS  SLF SLPKIMSNVHEFF+
Sbjct: 241 SPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFFI 300

Query: 301 HVAAKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYI 360
           HVAAK                                               VESIHQYI
Sbjct: 301 HVAAK-----------------------------------------------VESIHQYI 360

Query: 361 ESMKTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGLLT 420
           +SMK AYLADQRRRGDVNNPFLEADRRETARQEA AKR HPTLHLPANSQPSTQA G+L 
Sbjct: 361 DSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLPANSQPSTQATGVLA 420

Query: 421 SSGNHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSG 480
           SSGNHGAST  Q ST+ATPASS GGLSLFSTPSAP+T +SSLFMTPT SVQTSSLFSSSG
Sbjct: 421 SSGNHGASTAPQSSTLATPASSAGGLSLFSTPSAPATASSSLFMTPTASVQTSSLFSSSG 480

Query: 481 ATAPSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGAT 540
           A AP++LFGSSSAP+FSSANTPFGSTAPSFGQSASAG SLFSTPFASGAATGSGASFGAT
Sbjct: 481 AAAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASAGGSLFSTPFASGAATGSGASFGAT 506

Query: 541 SKSSKPKSRTARRY 545
           SKSSKPKSRTARRY
Sbjct: 541 SKSSKPKSRTARRY 506

[Close]

BLAST of Clc01G16410 vs. ExPASy TrEMBL
Match: A0A6J1KTN6 (nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497125 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 4.9e-214
Identity = 445/556 (80.04%), Postives = 461/556 (82.91%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QPQPQLFQQSSPLFSQQPQQFQLQQQQQQ-------QQ 60
           MAFSLFSTPQPQQPQQLF    Q QPQLFQQSS LFSQQPQ FQLQQQQQQ       QQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFSQQPQPFQLQQQQQQLQQQQQHQQ 60

Query: 61  QQQQQQQQLMQQQQPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120
           QQQQQQQQLMQQQQ Q QQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE
Sbjct: 61  QQQQQQQQLMQQQQ-QPQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120

Query: 121 SQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTE 180
           SQRLDQCSRLYDSSVSNDGFELDASRIVQELGGIS STEHQKV+LQELM + K MLWNTE
Sbjct: 121 SQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMISVKGMLWNTE 180

Query: 181 VAIRSFMMIRPRFLHKSAGG-SNPTAPSQVPGATLPLGSSGQPTSTTIAPVFDFYSGLPS 240
           VAIRSFMMIRPRF+H+S GG +NP AP+QVPG T PLGSSGQPTST+I PVFDFYSGLP 
Sbjct: 181 VAIRSFMMIRPRFVHQSTGGATNPAAPTQVPGVTSPLGSSGQPTSTSIVPVFDFYSGLPK 240

Query: 241 KPSPFLLQTVSRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEF 300
           KPSPFL QTVSRFEKYLGECRQWI +LEQLLV +SNRSASNS  SLF SLPKIMSNVHEF
Sbjct: 241 KPSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEF 300

Query: 301 FVHVAAKPGWKQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQ 360
           F+HVAAK                                               VESIHQ
Sbjct: 301 FIHVAAK-----------------------------------------------VESIHQ 360

Query: 361 YIESMKTAYLADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPANSQPSTQAAGL 420
           YI+SMK AYLADQRRRGDVNNPFLEADRRETARQE  AKR HPTLHLPANSQPSTQA GL
Sbjct: 361 YIDSMKAAYLADQRRRGDVNNPFLEADRRETARQETVAKRAHPTLHLPANSQPSTQATGL 420

Query: 421 LTSSGNHGASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSS 480
           L SSGNHGAST  Q STVATPASS GGLSLFSTPS P+T +SSLFMTPT SVQTSSLFSS
Sbjct: 421 LASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSGPATASSSLFMTPTASVQTSSLFSS 480

Query: 481 SGATAPSTLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFG 540
           SGATAP++LFGSSSAP+FSSANTPFGSTAPSFGQSAS G SLFSTPFASGAATGSGASFG
Sbjct: 481 SGATAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASTGGSLFSTPFASGAATGSGASFG 508

Query: 541 ATSKSSKPKSRTARRY 545
           ATSKSSKPKSRTARRY
Sbjct: 541 ATSKSSKPKSRTARRY 508

[Close]

BLAST of Clc01G16410 vs. TAIR 10
Match: AT4G37130.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 443.0 bits (1138), Expect = 3.6e-124
Identity = 302/548 (55.11%), Postives = 360/548 (65.69%), Query Frame = 0


Query: 4   SLFSTPQPQQPQQLF-QPQPQLFQQSSPLFSQQPQQFQLQQQQQQQQQQQQQQQQLMQQQ 63
           S+FS  QPQQ   +F Q QP   QQ++ +FS QPQQ Q     Q QQ QQQQQQ   QQQ
Sbjct: 31  SIFSQSQPQQTNSIFSQSQP---QQTNSIFS-QPQQQQQTSLFQPQQFQQQQQQLNQQQQ 90

Query: 64  QPQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDS 123
           Q  QQQL++FTNDKAPA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCSRLYDS
Sbjct: 91  QQVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCSRLYDS 150

Query: 124 SVSNDGFELDASRIVQELGGISVSTEHQKVMLQELMTAAKEMLWNTEVAIRSFMMIRPRF 183
           SVS++GFE DASRIVQELGGI+ + + QK +L ELM  AK+ML N E+A+RSFMM++PRF
Sbjct: 151 SVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMMLQPRF 210

Query: 184 LHKSAGG---SNPTAPSQVPGATLPLGSSGQPTS-TTIAPVFDFYSGLPSKPSPFLLQTV 243
            H   GG   S  + PSQ  G      SSGQ  + TT   V DFY G+P KP+ FLLQTV
Sbjct: 211 PHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAFLLQTV 270

Query: 244 SRFEKYLGECRQWIADLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVAAKPGW 303
            RFEKYL ECRQW+ +LEQLL LDS++ + ++  SL +SLPK+MSNVH+FFVHVAAK   
Sbjct: 271 VRFEKYLNECRQWVEELEQLLALDSDKYSRHA--SLLESLPKVMSNVHDFFVHVAAK--- 330

Query: 304 KQSLELFSEQENSSSDLHLHDLTGESRMLHVHILIANRLKIIPQVESIHQYIESMKTAYL 363
                                                       VESIHQYIESM+T+YL
Sbjct: 331 --------------------------------------------VESIHQYIESMRTSYL 390

Query: 364 ADQRRRGDVNNPFLEADRRETARQEAAAKRVHPTLHLPA---NSQPSTQAAGLLTSSGNH 423
           ADQRRRG+ ++PFLEADRRETA+QEAAAKRVHPTLHLPA   ++QPSTQ AGL+ SS   
Sbjct: 391 ADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTTSTQPSTQVAGLIASSATP 450

Query: 424 GASTIQQLSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTTSVQTSSLFSSSGATAPS 483
           G S   Q S   +  SSG G S  +TP+  S  +SSLF TP+++  TSSLF  S     +
Sbjct: 451 GGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPSSTAPTSSLFGPSPTPTQT 510

Query: 484 TLFGSSSAPMFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSK 543
            LFGSS A  F S  + FG T PS    +  G          GA  GSGASFG+ +KSS+
Sbjct: 511 PLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG----------GATPGSGASFGSMTKSSR 513

The following BLAST results are available for this feature:

BLAST of Clc01G16410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882193.1	2.2e-232	86.79	nuclear pore complex protein NUP58 [Benincasa hispida]	[more]
XP_004141933.1	1.0e-226	84.75	nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical pr...	[more]
XP_008440230.1	9.1e-223	84.98	PREDICTED: nuclear pore complex protein NUP58 isoform X1 [Cucumis melo]	[more]
TYK12916.1	6.8e-218	84.86	nuclear pore complex protein NUP58 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_023518567.1	7.0e-215	80.87	nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc01G16410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWH9	5.0e-123	55.11	Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1...	[more]

BLAST of Clc01G16410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI61	5.0e-227	84.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1	[more]
A0A1S3B190	4.4e-223	84.98	nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5D3CR89	3.3e-218	84.86	Nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1HHG2	2.2e-214	80.51	nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KTN6	4.9e-214	80.04	nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497...	[more]

BLAST of Clc01G16410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37130.1	3.6e-124	55.11	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	GENE3D	6.10.140.1350		coord: 228..296 e-value: 7.3E-15 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 517..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 517..544
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..210
None	No IPR available	PANTHER	PTHR13437:SF2	NUCLEOPORIN P58/P45	coord: 5..295 coord: 342..538
IPR024882	Nucleoporin p58/p45	PANTHER	PTHR13437	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	coord: 5..295 coord: 342..538

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G16410.2	Clc01G16410.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051028	mRNA transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0017056	structural constituent of nuclear pore