Clc01G10540 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc01G10540
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box protein CPR30-like
Location	ClcChr01: 14329271 .. 14344738 (-)
RNA-Seq Expression	Clc01G10540
Synteny	Clc01G10540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAAAATATATCTTATGTGATTTTGAGGGTGAAAATGAAACTAATCCACCTTTAATAATAGTGAACCGAGAGGCCATATTTGATTCGCATTGTAGAGTTTGGTTATTAAAAATACAATAAGTTCTGAAAGTATAAAAAAGAATGTGGTAAAAGAAGACCCAAACAATGAGCAATGAACGGTAGTGGGAGGCTTTTAGGTTTATCGACCGGTGAGGAACGCTAATCCATGGAGTGAAAAGCTGCCCTCACCACCCATGGCAGACGTACCTCTGGACCTTATCACCTATATTATCTGTCGATTACCGGCGAAGGCTATCTTACGCTTCAGGCGAGTCTCAAAGATATGGAAGTGCCTCATCGATTGCTCTAATTTCGTCAATCTTCACATGAAGAAATCAATCGACTCTCGAACTCGTCGCCATCTCATTATCCGTAAGAATTCTGATCTCTTCTCCGTCGATCTCGATCTGTTTGACCCCGCCGTCGAGCTTATTCACCCTCTGATGTGTTACGGCAGTCAAATTAATATTTGGGGCTCTTGTAATGGCATATTGTGCATCTGTAACGTTGCTGAAGACATCGCTCTCTGGAATCCATCCACGAGGAAGTACCGTATATTGCCGTCTCTGCCCCCGGAGCGTCGCTGTGATGGTGTTCTTCGTTTCTCCCTTGAGTCTTACGGATTCGGGTTCGATTCTGTTCATGACGACTTCAAACTCTTGAAAATTTCCCAGTATATAGGATTAGAAGATCCTGTGGATTTTGATTCACATGTCAAGGTTTTTAGTATGAAAAAATTTTGTTGGATGCCTATTGAAAGTATGACTTACATTCTTCGCTATACCTCGAAAATGGGAGTTTTTGTCAATAGTGCTTTACATTGGGTTGTGTCTAAGAATTTGGGCACGGAGTCAGCTGAATTAGTGGTGGCTTTTGATCTTGGAACTGATAAATTCGAAGAGATTCCATTGCCAGAGCTTACTGATAGCCAATGTGAAATTCACGTGGATGTTTTAGGTGGGTGTCTCTGTTCGCTTGCAAATTATGACCGAGTTCGCTTTGAGGTTTGGGTGATGAAGGAGTATGGAGTTAAGGAGTCATGGATGAAACTACTGATTGTTTCTCAAGTTGATTTTGTTGGTTCCATTAAGTCTGTGAAACCATTGTCTTATTCGAAGACTGGTCGTAAAGTTCTTCTACTTCACAATCGTAGAAAGCTCATGTGGTATGATCTTCATACTCAAACAGTGCATGATGCTGTGATTGATGGGCTGCCTCATAGCTTTGATGCTGAAACATTAGTGGAAAGCCTTATTTCAGTTGATGCTTACAGGGAAAATACTGTAAAGATCCTCGAAGAGAAGAGGTTATTATTATTATATACTTTGTTTGAAAGTATTTCTGTTATTTACATTACATTTTACAGATAAATACTTCAATTTGCCTCTTGATTTTTATTCAAATTATTCTCTGTGCATGTTCTGGCCAGTTCATTTAGTTATTTTTTATAAGTTTTATGGAAAAATGATGTGGAGCATGAATTCTATTTGTTTCTTTCAGGGATGATTTCTTGTCAGAAGGGTTCAAACTGGTGTTATAGGCAAAAAGAGGAGCAACTGCGGAGTGGAAATGGGTATTTTTTTCCCCTTTTTTTCCTTAAAAATTTGAAACAGAGTTTACAATTTGTGCTTAGCGTCACAAAGTTTTACTTCTTGGAAATGAAGAACGAAAAAGGAATTTCTTTTCTAACTAAAAGGGGCCTTAATTTCTATCACAAAGTTGAATTTTACGAATTCCTTCATGGTTAAAACTGAGAATTGATGATGGGGTGCTACATTGTATTACACATAAGACCATCATTGTAGAAAAGATCATATAAATATGGTGGGTGGCAACATCTCGATGTACAAGGTGGTTGAAAGAGATTCTCACCGCTCCTCTGAGTTTTTAGGTTGAATGAAACATATTTACATACTAAACATGTCCTGTATAGGTGGTTAGACTGTAACAAGTACCTAACTTTTGTAATGTATGGAATTGATAGCTTTCTTGTTATTTGGGCTCTTGTGATGCATATTGTTAATGGTGACTTTTTTCAGTTTGTAAATAAATAATATGTATATGGATGAGATTTTCAGAGAAATTTATACGTTGAATCAACTTTAATTTGTATTAATTTGTGTTAGTATAGTGGTATACTATTTCTATTCTCTGTCTTTGGTCCTTTGAGTCAAGGAAGTTTTACTCTTCCTGGAGCTTCAAGTCTCAGTTTTCCCGTCTTCTTTTTCTTCTCATATGAAGGGTAAGACCTCCTTAGAGCTTCCCAAAGCTCATATTTTCGAAATTGTTTCATATGGCTAAAATGAATACACTTTTGAAATATACTCTCAATGCAGTTCTACAAATATTATGTATTCAGTGGTTCTGACAGTTCTGATGTACTGTCAGAACCACTGAATACATAACTCACAAAACATACAAATACGTACCACACCAAACCCAACTAGAAATGTCTACGTGCCACATTGGATCAAACCATTTGTACATACAAAGACTAAGGAGAATGAGTATGCTAAAGTCTTCATAATTGTACGTCTCACCATAGGGGTTGTTTTGAACACTGCAGATAGACTGGAGGTTGTAGGGACACATGTCATACAAGTGCCCCGCACCACACTGCGGGCAGCTTACAGACGATGTCGGATTCATCGCGTACATCGCGTTCATCGCAGCAACTAATCTACCTTGATTATTCAAGGCTATCGTCTCCAACAGAGATGTCATTTCGGCGATCTGAGCAGAGAGATTGGTGGCAGCATCAGTTTCAAGCATTCCAGCTTGCGTTTGCCTTCTATTGGTGGAGCGAAATCCATATCCATTGTCCACCCACCCATTAGTATTCCATGAAGTTCTGTCGAGAATATCTTCGGCATATGTGTAGGTCATATCCAATAATCCTCCTGCTTACGCAAGCAATTCCTCACTAGTCGTTTGAATCAGGTCCAAGCAATTGGTCCTTCTTCAATTCTACCTTGTCCTTCGGGTGAAGGTTCTTTCAATCTCTGAGTCAATATTGAGCTATGGATTGCTCCCGTCACTCAGATACTATTAGAAGCTTCTGGCAGAGGAGAAACTTACTATACTCCATCGACTGAGGAATCCTACAACACAATAATCCAAATAAAATAATTAAATCAATGCAATAATCCCCGGCAACGGCGCCAAAAACTTGTTGTACAGACGGATCTCAAGTCCCTGACAACGACGCCAAAAATTTGTTGTGTATGCAATTGTGGAATTGGATAATTTACAAACGCAAGGTGCAATTAAACTATGATTATGCGTTTCACATGTTATGCGTTGAACATACCATGCGTCTTACTTATGCTTAAATGTTATGCGTTGGTGATCTGTCAAGTTTTCCTACCCAAGTATAAGCAAAGGAGTAGGTTTTCTCGGTGAGTTCAAGGTCGAACACAGGGATTATGTTGATTCTATATTTAAGTGGATTATATGCATTGTAGTGGTAACCAAAAAATAATTGGGAGATTTTTTTGTTTCTAATCTAAAGAAAGCGATAACATGTACACTAAACTAAATTGTGGAAGATGGAAAGGCATGCGACACAGCAAAGTCAGCTAATGATTTGAATGAATGGATAAAAACAGGGTTCGGGTTAGTTAACATCTAACATCAGAAACGCATGGTGATAGTCTATTCATACTTGCGACTCTTCTCCCGGTTATCAGCCGCTATGCGTTATATGTCTATAACACATAGGAAAGTGTTAAGAACCAAGGTTATTCCTATAGACAGGTAACACTTCTTGGCCTTGTCAATTGAGTTCCACAATCACTTACTCTCTCGAGCAGTCTGATTATTACTACTTATATCGATTAGCTAGATGGACATAAGCATCGGATTAAGTTTGCAATTGACAAGATGCAATAGTTACACTATGGTTCTTAGTTAGATGCTAACGCAACCCTAGACCCTTAAAAGATTAGTTACTCATGGATTCAAAGTAAAAAGCGGAAAGTATAAAGAAATGAATAGACATGGAAGAAATATATATTAATGAACGGAATACAAGTTTAGACAGCTCAATGTCTTGACACAAATCTAAAATCAAGATAGAAAAGTAAGATAGAAAGCAGGAACGACGTCAATGTCTTGAGTCGCCGGAATGGAAGCGTGAGGTTCTGCTGTGAAGTGGTCAGGCGAAGGGAAGACTCTTCTCTCTCGAGCTATTTGTCTCCGGTTGTAGTCTAGAGAGAACTCTGCTGTCATTTATGGAATTCTTCTGAGAATCAATAACACTTTCTCATCTTGCAGGTTTGCCCTTTTATAGATGCTGCGTTCGCAATCAATAGCAAATCTGCTTGATTGGCGGCGAGACTGATATCACGCATCCATCTCGCCTGATTGCGTAATTCTCGGGTCAATTTAGATCCACCACTTCAGCCACAGATCATGTATGTCAATCTTCCGACAATCTCTCAAGATTCTGATCTGATTTTCTGCGCCTTGTGTCTTTGGTCATTATGCGTTCAAGGAGAGTGGGGCTGATGTCAACGCGTCATAGGTCGCATAGTCTTGCGTTGAGAAGTCGTTAACGCATCTTCAGGTTGTTCGCATTCTGTTCAGATCATGCGTCCATGAAGAACAGATTGCTAACGCATAGTCCTGTGTTAAGAAGTCGTCAACGCATCGTTTGCATTCATGCGTTAAAACATGCGTTTTAGGCTCAAAAAGTGGTAAAATCATTATCTTCATACAAGAGTAGAACGCAAATGAAGATTTATTAGTAGAATTTCAGCATAAACTACCGCATGATTCTCTATCTAATCTCTATTTCTCTAAGAAAAAGGCTATCATAACTTGTATTTCTACAAGTTATCAATAATGAGGCAGATGAGGCTCGTGTACGCTAAGCTCTAGGAACTCTTTCATTACTTAGGTGGGAAAGAAAACATAGAAAAGCGTGAGTTGGAATGCCTAGTGAGTAACAATTTTAGAAATAGTTACATTATCATCCACTAAAAACATTTTAAGTTGAGGAAATATTTTTTAAGCTCAAAGCATCGAGTAATATCAAACTCATATCCACGGATGAAAAAATGAAATAAAACATCATGAAAACAAGTAAACTTCCATCAATTAAACTTAGGACACTTCACATTAAACCTGCATCCAATATCCTTAGTTGAGGTAGAACAAACTCAATACATCCAACGTCGTAGCCTTAGTTGATGTAGAGTAGTCTCAATACATCAACGTCAATACCATTTTTCTACGTGCACACAGAATGCCCCCAAAGGGCTAATATTGGACTTCGCAAATACCTTCTTTCATACTTCGTATTGGAAATCCTTGGAATTTCTCGAATACATTCTTTCATCCTTCAGTATTGATAACTTGTAGAAATACAAGTTACTATAGTTTTTTTTCTTAGAATAATGGAGAAGATTTAGAGAATTATGTGGTAATCTTAATAAAAAATTTGTTGATAAAAACCTTCATTGCGCTTTACACTCTTGATTTGATGAAGATAAATGCTTTTAAGTAAACTATCTCTAAAACACATTATTTAGTGCAGGAATGCATGACTCAAAAGTGACATCTTTTAAGTGATAGATGTAAAGTTGTAATTCATCAAATGCAAGCTTTGAGATCTTCAACAACTGGAGATTGATCAGCTTAAACTGTGGCATGAGAAGCGGTTACCAAGTTAGCCGATAATTACACAATCATGCGAGATTGACGCAAGGCAACAAATTGACTGATAATGATGCGAATTTGCTAGCGTTACAATGCAACCTCTATAAAAGGGCAGATCTGTAGGCTGAAAACGTTGTTGAATTTCGTAGGAATTCATTTGTTTTGGCTGAAATCGAGAGAGTAGCCTCCTTTTCGATCAACCACACCACCACAACAACCATCACGCAACCACCATTGGTGGAGTCAAAAGATTGATCAGCCACCAACCATTTCCCTGCTTTCTATCTTTATCTTTACTTTCTTATTGTTTACATCTTGTATCAAGAGATTATACCTTTTGTAACACTTGATCTGTTTCAGTAATCTAATCATCGTCCATGACTTTCATCTCTACATTTGTTTCCGCTTTCTTGTTAATTGTTTGTTTAAGAAACAACGTTGAGATTATTTCATTTTGCTTAATGTATGAGAATCTATTGCTTGTTTCCATCTAACTAATCGAGATAAGTAGAAATAATCAATTGCTTGAGAGAGTAAGTGATTGTGGAACTCATTAAGTAAACTAAGTAGTGTTTCTAGACATAGAAGCAACCTTAAGGTTCAATAATACTTCACTCATGCGTCATAGACATATGAGTATGCAATCTATCAGCCGAGAGATGCAAATTATAAGTTGAGAACGTGAAATGTTGCGTTCGCAATCAATGGCAAATCTGCTTGATTGGCGGCGAGATTGAGAAGTCATCAACATATCGTTTGCATTCCTGCGTTAAAACATGCATTTTAGGCTCAAAAAGTGGTAAAATCATTATCTTCATAAAAATACAAGAGTATAACGCAAAGGAAGATTTATTAACAAAATTTAGCATAAACTATCGCATGCTTCTCTATTTAATCTCTATTTTCCTAAGAAAAAAGCTATAATAACTTGTATTTCTACAAGTTATCATGAAATAATTTACACTGTGTTTCTGAAGATAGACAATGATAACTTGTAGAAATACAAGTTATTATTGTCTCTTGCTTAGAAAAATAGAGCTTAAATAGAGAATCATGTGGTAATTAGTTTTAAATTCTATTGATAAATCTTCCTATGCGTTCTACTCTTGTAAATTGATGAAGATAGTTGTTTTGAAGCTTTTTGAGTATAAAACGCAAGCTTTGATGTAGGAACACAAGCAACCCGTAATTGCGTTGGCAACCTCTTAATGCAAGACTATGCGTTGGCAACACTTCAACGCAGGTTGATGCGTTAGCAACCATGCATGCGTTGGCATAATTAAACGCATGAACCCAAGTTATCCGTGGACGCATATCAGAAAGGCAGCAAAGAATCAAATAAGAATCTTGAGAGATTGTCGGGAGATTGGTATGCTTGATATGCGACGAGAGTGGTGGATCGAAATTAAACCGAAAATCACGCGATTAGGCGAGATGGACGCAAAGCAGGAATTCAGCCTCCAATCATGCAGATTTGCTAGCGATTGCAACGCAACATCTATAAAAGGGCAGACCTGTAGACGAAAATGTTGTTGAACCTCTCGGAAGAATTCCTAAATGACAGCAGAGTTCTCTCCAAACGACAATCGGAGACAAATAGCTCAAAAGAGAAGAGTTTTCCCTCCGCCTGATGATAACTTGTAGAAATACAAGTTATTATAGCCTTTTTCTTAGAAAAATAGAGATCAAATAAAGAATCATGCGGCAGTTTATGTTGAATTCTACTAATAAATCTTCCTATGCGTTCTACTCTTGTATTTTTATGAAGATAATTATTTTACCACTTTTTGAGCCTAAAACGCATGTTTTAACGCAGGAATGCAAACGATGCGTTGATGACTTCTTAACGCAGGACTATGCGTTCGCAATTTGTTCTTCATGGATGCATGATCTGAATGGAACACGAACAACCTGAAGATGCGTTAACAACTACTCAACGCAAGACTATGCGTTAGCAACCTATGACGCGTTAACATCAGCTAAATTATCCATGGACGCATAACGACCATCAACGCAAGGCAGCGGAAAATCAGATCAGAATCTTGAGAGATTGTCGGAAGATTAACCTACATAATTTGTGGCTAAAGTGGTGAATCTAAATTGACCCAAGAATTACGCAATTAGGCGAGATAGACACATGATATCAATTTCGCCGCCAATCAAGCAGATTTGTCATTGATTGCGAACGCAGCATCTAATTAAAAGGAGAGTCCTGCAAGATGAGAAAATGTTGTTGATTCTCGGAAGAATTCCTAAGTGACAGTAGAGTTCTCTCCAAACCACAACCGGAGACGAATAGCTCAAGAGAGAAGAGTCTTCCCTCCGCCTGACCACTTCACAGCAGAACCTCACGCTTTCATTCCGGCGACTCAAGATATTGACGCCTTTTCCTGCTTTCTATCTTGTTTTTCTATCTTGATTTTAGATTTGTGTTAAGACATTGAGCTATCTAAAGTTGTATTCCATTCATCAATCTATATTTCTTCCATGTCTACTCATTTCTCTACACTTTCCGCTTTTTACTTTGAATCTATGAGTAACTAATCTATCAAGGGTTAAGGGTTGCGTTAGCATCTAAATAAAAACCATTGTGTAACTATTGCATCTTGTCAATTGCAATCTTAATCTGATGCTTATGTCCATCTAGCTAATCGATATAAGTAGTGATAACTTGTAGAAATACAAGTTATGATAGACTTTTTCTTAGATAAATAGAGATTAAATAGAGAAGCATGCGACAAGTTATGTTAATTTTTATTAAGAAATCTTTCTTTGCGTTATACTCTAGTATTTTTATGAAGATAATGATTTTACCACTTTTTGAGCCTAAAACGCATGTTTTAACGCAGGAATGCAAACAATGCGTTGATGACTTCTTAACGCAAGACGACGCGTTAGCAATCTGTTCTTCATGGACGCATGATATGATCGGAACGCGAACAACTTGACGATGCGTTAACAACTACTCAACGCAAGACTACACGTTAGCAACCTACGACGCGTTGACATCGGCCAAACTATTCATGGACGCATAGACGACCATCAACGCAAGGCGCCGAGAATCAATTCAGAATCTTGAGAGATTGACGGATGATTGATGAACATGATTTATGGCTAAAGTGGTGGATCTTAATTGACCCGAGAATCACGCAGGCGAGATGGACGCATGATATCAATCTCGCCGCCAATCAAGCAAATTTGGCATTAATTGCGAACGCATCATCTATAAAAGGGCAACTCTGCGAGATGAGAAAGGGTTGTTGATTCTCGGAAGAATTCCATAAGTGACAGCAGAGTTCTCTCAAACTTCAACCGGAGACGAATAGCTCGAGAGAGAAGAGTCTTCCCTCCGCCGGACCATTTCACAGCAGAACCTCACGCTTCCATCCGGGCGACTCAAGACATTGACGCCTTTCTTGCTTTCTTTCTTAGTTTTTCTATCTTGATTTTAGATTTGTGTCAAGACATTAAGCTTATCTAAAGTTGTATTCCGTTTCATCAATATATATATCTTCCATGTCTACTCAATTCTCTATACTTGTCGCTTTTTACTTTGAAACCATGAGTAACTAATCACTCAAGGGTCTAGAGTTGCGTTAGCATCTAACTAAGAACCATAGTGTAACTATTTCATCTTGTCAATTGCAAACTTAATTTGATGCTTATGTCCATCTAGCTAATCGATATAAGTAGTAAAATCAAACTGCTCGAAAGGGTAAGTGATTGTGGAACTCGATTGACAAGGGCCAAGAAGTGTTACCTGTTTATAGGAATAACCTTGGTTCTTAACACTCTCCTATGCGTTATAGACATATAACGCATAGCGGCTGACAACCGGGAGAAGAGTCGCAAGTATGAATAGACTTCACCATGCGTTTCCGATATTAGATGTTAACTAACCCGAACTCTTTCTTTATCCATCCATAAAATTCACCTAGTTGAATTTGCTATGTCGCATGCTTTCCATCTTCCACAAGTTAATATAGTGTACATGTTATCGCTTTCTTTAGGTTAGAAACAAACACAATTTCACTATTTCTTGGTTACCACTACAACGCATGAAATTCACATAAATACTAAATCAACATAATCCCTGTGTTCGACCTCGGACTCACCGAGAAAACCTACTCCTTTGCTTATACTTGGGTAAAGGATAGGAAAACTTGACAAGATCACCAACGCATAGTAGTAAGACGCATAGCATGTTCAACGCATGATATGTAAAACATATCATCATATCTTACTCTGCACCTTGCATTTGTAAATTTACATTTCCACAATTCACATCACAACACTTGGAGATTAAAGACAGAAAAGGAACCGAGAATCAGGTTGCGGACCACCTGTCTCGGTTGGAAAATAAAGAGGTCCAGGAAAGTTGGAGTGATATAGAGGAACGATTCCCAGATGAGCACATCATGAACGCAGAGAGTCAGGAACCGTGGTATGCAGACATAGTAAAGTACTTGGTCTGCAACCAATGGCCTGAAGAATTCAATGCTCAACAAAAGAAAAATCTCCAATATGAAAGTAAGTTCTACTGCTGGGATGAGTCATATCTATACAGACTTGGCCCGGACCACATCCTGCGTTGATGCGTTCCAGAATGTGAAACGCATAGCATTTTGAGAAGCTATTGATAACTTGTAGAAATACAAGTTATTATAGTCACTATTTGATTTAATTAGAGTAACTTTGGAGCTAAATGCATGATTTTGGTAGTTGAATGATGAAAAATGTATCACCATGCGTTGGCACTACTTACAAAAGAAAATACCTGAAAAACGAGCTTTTCTGTTCCTAACACGTGGTTAAGAAGAAAAGAAGCGCAAACAACCAAGTACGAAGAGACGAAGCTGCTGCGAGAACAAGTGGAAACCCATGCGTCGAGCCTATGCGTTGAGACCATGCGTCGAGCCTATGTGTTTGACAATCTGAAATGTAGAAACAGACGCATGCTCAAACAGCTGTCATGTCATTATGAAAAAGGACAACACCAAATCAGATCATGGCAGAACAAATAGGCTGACAATCTGAAAAGTCTATGCAGCGTGGCTGAAATTTAATGAACAAGGTGTCAGGTCATCATGATATCAACTTTTTGAAGCCTATAAATAGTCTAAAAGCTTCTCTAAGAAGAGGAGGAAGGGAGACCAGTTCAAGAGGCGAAAGCTCTGCACTATTTCTCCCTCACCATAACCAGCCTCCATTTCGAGCTCTTCTGAGAAAAGGATTCTGAGCACCTTCAAAGTCGTCTCCCAGTGAGTGAGAATCTCCACCCTATGGAATCTATGTATCAGATAGCAACCATCTCAAGCCTCCATGAAGTAAGACGTTGTCAGTGGCGGCTTGACGCCCTTCATTTCTGTTTTATTTCCATTTCTCTTCTTCTTGCTTATATTTTGTTAATGACATTCGAGAAAATGATTTATTTTCTTAATATGAGTATGATTGACTACTATCTTCCATCTATTTCCGTATTAAATACTTTACAACATGTTGTCTAAATGCTAAATGAGTTAAATGTTAAAAGTTAGTTTTTCTTGAGCAATTCTGAGTATGTTACATCTTGATTAATGCATATCTTTAGCTTGCATAACTTTGTCTGACAAACAAATGTAGTAAGCATGACTATCGAGTTTGAGAGAGTGGATAGTTAATCTTTAGCATTAATTAAAACTAGATGAGTTGCAGAGATGTAGTTCATCTTTTGCCAACGCAAACTTATCATACGTCTTAGAGATAAGATTAATGTGGTGTTGAAACATTGAGAGATTGATTCACAAACGCAATTTGTAGGTATGTAATTGTACTTAGAAAGCTTAGGTAACAACTAGCTCTTGCGTTCAACTCTACTTCTATCGCATGGTTCTATTCATTCCCAACGCATGCTATCTGACACTAAATTACATACGACTACCCATCGCCGCGTCCACCTCATTATTAGTAGTAAGAAATTCTTTTCATTCTTTATGTATAGTTTTACACATAATCAACAAATGCACATATTACTTGTATAGTTTGCCGCATAGTCAAGCATCTCATCTCAACGCCTAGTTATTACAAATCCCTGCGTTTGACCCTAGACTCACCAGGAAACCTATAAATGCTTATACTTAGGTCTTTATAGGAAAACTTGCTTAATCATGATCACATCTAAAGTAATTCTCGACGCATCCTTGTACGGAAATGATAAATCTATTTTTGTGCAACGAGCTAAGAAATTCAATTTAATTCGAATAGAAATTCAAACGAACACTGTCATGAAGCATCTTACGGAGGACACTTTGGGGGGCAAAGAACAGCTGCAAAGGTATTGCAAAGTGGGTATTTCTGGCCCACATTATTCAAAGACGCAAGGGCATATGCAATGGCTTGCAATCGTTGTTAGAGAACAGGCAACATTTCCAACCGAAATGAGATGCCTCTAAACTCAATGCTGGAAGTTAAGTTGTTTGACGTATGGGGAATCGATTTCATGGGACCATTTCCTCCTTCTTGCGGTAATCAATATATCCTAGTAGCAGTCGACTACGTATCAAAATGGGTAGAAGCAGCAGCCTGTGCGAAGAACGACACAAAAACAGTGTCCAAGTTCTAAAAGAAACAAATCTTCTCTCGATTTGGGACACCAAGGGCGATAATTAGTGATGAAGGTACACATTTTATAAATCGCATAATCACTAATTTATTGACAAAATTTAATGTCTCGCACAGGGTAGCAACTGCCTATCACCCACAGACAAACGGAAATAACAAACCGGGAGATCAAGTCCATACTTGAAAAAGTCGTGAGCACATCAAGGAAAGATTGGACGGAGAAATTAGATGAAGCTCTATGGGCATACAGAACGACATTCAAAACACCTATAGGCATGTCACCCTATGCGTTGGTGTTTGGGAAAGCATGCCATCTCCCGCTTGAGTTGGAACACAAGGTCATCTGGGCTATGAAGAAGCTCAATCTACACCAGGACGCAAGTGGCGAAGCAAAAAAGCTTCAATTAAACGAACTCCTGGAATGGAGACATTTAGCTTACGAAAACGCAAAGCTATATAAGGAAAGGACCAAGATATGGCACGACAAAAATATTAGTAAGAAAACTCTATACGTCGGCCAGAAGGTTCTATTATTTAACTCAAAGTTGCGTTTATTTCCATGTAAGCTGAAATCTCGCTGGTCTGGACCATTCATAAATAAGGAAGTGTCCCCGCATGGTGCTGTCAAGCTAACAAATGAAGACGGAACCACCTCCTTCAAGGTCAATGGACAAAGGGTAAAACCCTATCACATTGGAGAGCTCGAAATCGACAAAACCTCCATTGACTTACGCGAGTGTAATGACTGAGCTTGCGTTGAAAGGTCCCTGCGTTGCCGAATGTCTTTTCTTTTCAGGGACGCTTTCTTTGACCCTTGTCTTTCTTACCTTGTTTTCAGTATTTGTTTGTAATTCTTTGAATTCAGTATTAGGAGTAGTATTAATTAAAGAAGCATGAAATTAGGTGTCGAGTTTGTAAACAATTTGATTTTACCGCATACTCTGTAATTCATGCCTGCGTCCAACGCATAATGGAACTATGCGTTCATCGATAGACAATTTCTGTGTTTATCGAGTTAAGTTTAGAAGTACGGTTAGGGATGTAATTTTTCAACCGTATAATACTTAAAACGTCCAACACATACTTTGAACTAAAAACCATGCGTTCATCAGTATTCTGTATGCGATAATTGTATGCGTTCATCATTTCTTCGCCGTATGGAATTTCTAATTACTTCTTTTGCGTGGTCCCTTGCTGTAAATTCATTCTAAGTACATATATAATTATTTCCAACTTTTATCTTTGCGTTGAAAAATTAGTCACTATGAGGATAATCATGCTTACACTTTTTATACACTCTTAAGTTAAATTACTTTCAATGCGTCTGCATACTATTCCTTGGAAACGCAAACCTACTTTGCATGTATGCAAGCGGCCAATTCAAACCTCTTTTACAAAATTTTGCAACATAATCTTTGTTTACAATTTAAGCAATGACGACCTTGCTACTCTCAAGTTTGGGGGTGGAAGAGGTTTGAACTGTCAAAGATAAAAATATGAGAAACTTATTTCAAACTGTCCAAAAAAAAAAAATTCTTTTAAACACAAAACTCCGCTGGCAAGACTAATATATTTATCTTGTTAAGAGTTTAGCTAAAAACGACACCTGCTCGTAGTTGGCCGCCTCCATGCACCCCATAGTTTGTGTGTCAAAACAAAGGTAGGTAATTGTAATCAGCGACGCATAGATAAAATAACAAACTCTAATGTCTAGTGAGGAAACCGAACTTAGATAAGAGTTTAGTCGAGAAGGGCATTTGCTCGTAGTTGGCTGCCTCCATGCACCCCATAGTTGGTATGTCAGAACAAAGGTGGGTAACCCTACTCGACGCATGCTTAATATATAAATAAGAAAACAAGAAAGAAAAATGAACTTTATATCTTCATCTTTTCAGACTCAGTGTTCAAAAGAAGAAACAAAAATTTTATGAATAATGAGTTAAAGAATTTTGAAAAGAAAGCTTGTCGCATACAAATTAGACCCATCCTAAAGAAAAGAATATAGAGGTAGAGAAGTACTATAACTGAGGGGTAGCTGATTGAGTATAGCATTCTAAAAGACTAGTCAATGCGTTGAGAAAATGTTTAGGATGATTGAAGTTTCTTAGATAAAAGTTATGCTTGAGGACAAGCATTTATCTAAGTTTGGGGGTGTGATAACTTATAGAAATACAAGTTATGATAGCCTTTTTCTTAGATAAATAGAGATTAAATAGAGAAGCATGCGGCAATTTATGTTGATTTTTATTAATAAATCTTCATTTGTGTTATACTCTTGTATTTTTATGAAGATAATGATTTTACCACTTTTTAAGCCTAAAACGCATGTTTTAACGCAGGAATGCAAACGATGCGTTGACGACTTCTTAACGCAGAACTATGCTTTAGCAATCTGTTCTATGGACGCATGATCTTAACGGAACGCGAACAACCTGTAGAGGCGTTAACAACTACTCAACGCAAGACTATGCGTTAGCAACTCATGACGCGTTGACAACGACCAAACTATCCATGGACGCATAAACAACCATCAACGTAAGGCAGCGGACAATCAGATTAGAATCTTGAGAGATTGTCGGATGATTGACATACATAATCTGTGGCTAAAGTGGTGGATCTAAATTGACCCGAGAATTATGCAATCAGGTGAGATGGACGCATGATATCAATCTCGCCGTCAATCAAGCAGATTTGCCATTGATTGCAAACGCAGCATCTATAAAAGGGCAAACCTGCAAGATGAGAAAGGGTTGTTGATTCCCGGAAGAATTCCATAAGTGACAGCAGAGTTCTCTCAGACTTCAACCGGAGACGAATAGCTCGAGAGAGAAGAGTCTTCCCTCCGCGGACCACTTCACAGCAGAACCTCTCGCTTTCATCCAGGCGACTCAAGACATTGACGCCTTTCCTGCTTTCCATCTTACTTTTTCTATCTTGATTTTAGATTTTTGTCAAGACATTGAGCTTATCTAAAGTTGTATTCCGTTTCATCAATATATATATCTTCAATGTCTACTCATTTCTCTATACTTTCCGCTTTTTACTTTGGAACCATGAGTAACTAATCTCTCAAGAGTCTAGGGTTGCGTTAGCATCTAACTAAGAACCATAGTGTAACTATTTCATCTGTCAATTGCAAACTTAA

mRNA sequence

TTTCAAAATATATCTTATGTGATTTTGAGGGTGAAAATGAAACTAATCCACCTTTAATAATAGTGAACCGAGAGGCCATATTTGATTCGCATTGTAGAGTTTGGTTATTAAAAATACAATAAGTTCTGAAAGTATAAAAAAGAATGTGGTAAAAGAAGACCCAAACAATGAGCAATGAACGGTAGTGGGAGGCTTTTAGGTTTATCGACCGGTGAGGAACGCTAATCCATGGAGTGAAAAGCTGCCCTCACCACCCATGGCAGACGTACCTCTGGACCTTATCACCTATATTATCTGTCGATTACCGGCGAAGGCTATCTTACGCTTCAGGCGAGTCTCAAAGATATGGAAGTGCCTCATCGATTGCTCTAATTTCGTCAATCTTCACATGAAGAAATCAATCGACTCTCGAACTCGTCGCCATCTCATTATCCGTAAGAATTCTGATCTCTTCTCCGTCGATCTCGATCTGTTTGACCCCGCCGTCGAGCTTATTCACCCTCTGATGTGTTACGGCAGTCAAATTAATATTTGGGGCTCTTGTAATGGCATATTGTGCATCTGTAACGTTGCTGAAGACATCGCTCTCTGGAATCCATCCACGAGGAAGTACCGTATATTGCCGTCTCTGCCCCCGGAGCGTCGCTGTGATGGTGTTCTTCGTTTCTCCCTTGAGTCTTACGGATTCGGGTTCGATTCTGTTCATGACGACTTCAAACTCTTGAAAATTTCCCAGTATATAGGATTAGAAGATCCTGTGGATTTTGATTCACATGTCAAGGTTTTTAGTATGAAAAAATTTTGTTGGATGCCTATTGAAAGTATGACTTACATTCTTCGCTATACCTCGAAAATGGGAGTTTTTGTCAATAGTGCTTTACATTGGGTTGTGTCTAAGAATTTGGGCACGGAGTCAGCTGAATTAGTGGTGGCTTTTGATCTTGGAACTGATAAATTCGAAGAGATTCCATTGCCAGAGCTTACTGATAGCCAATGTGAAATTCACGTGGATGTTTTAGGTGGGTGTCTCTGTTCGCTTGCAAATTATGACCGAGTTCGCTTTGAGGTTTGGGTGATGAAGGAGTATGGAGTTAAGGAGTCATGGATGAAACTACTGATTGTTTCTCAAGTTGATTTTGTTGGTTCCATTAAGTCTGTGAAACCATTGTCTTATTCGAAGACTGGTCGTAAAGTTCTTCTACTTCACAATCGTAGAAAGCTCATGTGGTATGATCTTCATACTCAAACAGTGCATGATGCTGTGATTGATGGGCTGCCTCATAGCTTTGATGCTGAAACATTAGTGGAAAGCCTTATTTCAGTTGATGCTTACAGGGAAAATACTGTAAAGATCCTCGAAGAGAAGAGGGATGATTTCTTGTCAGAAGGGTTCAAACTGGTGTTATAGGCAAAAAGAGGAGCAACTGCGGAGTGGAAATGGGAATGCAAACGATGCGTTGACGACTTCTTAACGCAGAACTATGCTTTAGCAATCTGTTCTATGGACGCATGATCTTAACGGAACGCGAACAACCTGTAGAGGCGTTAACAACTACTCAACGCAAGACTATGCGTTAGCAACTCATGACGCGTTGACAACGACCAAACTATCCATGGACGCATAAACAACCATCAACGTAAGGCAGCGGACAATCAGATTAGAATCTTGAGAGATTGTCGGATGATTGACATACATAATCTGTGGCTAAAGTGGTGGATCTAAATTGACCCGAGAATTATGCAATCAGGTGAGATGGACGCATGATATCAATCTCGCCGTCAATCAAGCAGATTTGCCATTGATTGCAAACGCAGCATCTATAAAAGGGCAAACCTGCAAGATGAGAAAGGGTTGTTGATTCCCGGAAGAATTCCATAAGTGACAGCAGAGTTCTCTCAGACTTCAACCGGAGACGAATAGCTCGAGAGAGAAGAGTCTTCCCTCCGCGGACCACTTCACAGCAGAACCTCTCGCTTTCATCCAGGCGACTCAAGACATTGACGCCTTTCCTGCTTTCCATCTTACTTTTTCTATCTTGATTTTAGATTTTTGTCAAGACATTGAGCTTATCTAAAGTTGTATTCCGTTTCATCAATATATATATCTTCAATGTCTACTCATTTCTCTATACTTTCCGCTTTTTACTTTGGAACCATGAGTAACTAATCTCTCAAGAGTCTAGGGTTGCGTTAGCATCTAACTAAGAACCATAGTGTAACTATTTCATCTGTCAATTGCAAACTTAA

Coding sequence (CDS)

ATGGCAGACGTACCTCTGGACCTTATCACCTATATTATCTGTCGATTACCGGCGAAGGCTATCTTACGCTTCAGGCGAGTCTCAAAGATATGGAAGTGCCTCATCGATTGCTCTAATTTCGTCAATCTTCACATGAAGAAATCAATCGACTCTCGAACTCGTCGCCATCTCATTATCCGTAAGAATTCTGATCTCTTCTCCGTCGATCTCGATCTGTTTGACCCCGCCGTCGAGCTTATTCACCCTCTGATGTGTTACGGCAGTCAAATTAATATTTGGGGCTCTTGTAATGGCATATTGTGCATCTGTAACGTTGCTGAAGACATCGCTCTCTGGAATCCATCCACGAGGAAGTACCGTATATTGCCGTCTCTGCCCCCGGAGCGTCGCTGTGATGGTGTTCTTCGTTTCTCCCTTGAGTCTTACGGATTCGGGTTCGATTCTGTTCATGACGACTTCAAACTCTTGAAAATTTCCCAGTATATAGGATTAGAAGATCCTGTGGATTTTGATTCACATGTCAAGGTTTTTAGTATGAAAAAATTTTGTTGGATGCCTATTGAAAGTATGACTTACATTCTTCGCTATACCTCGAAAATGGGAGTTTTTGTCAATAGTGCTTTACATTGGGTTGTGTCTAAGAATTTGGGCACGGAGTCAGCTGAATTAGTGGTGGCTTTTGATCTTGGAACTGATAAATTCGAAGAGATTCCATTGCCAGAGCTTACTGATAGCCAATGTGAAATTCACGTGGATGTTTTAGGTGGGTGTCTCTGTTCGCTTGCAAATTATGACCGAGTTCGCTTTGAGGTTTGGGTGATGAAGGAGTATGGAGTTAAGGAGTCATGGATGAAACTACTGATTGTTTCTCAAGTTGATTTTGTTGGTTCCATTAAGTCTGTGAAACCATTGTCTTATTCGAAGACTGGTCGTAAAGTTCTTCTACTTCACAATCGTAGAAAGCTCATGTGGTATGATCTTCATACTCAAACAGTGCATGATGCTGTGATTGATGGGCTGCCTCATAGCTTTGATGCTGAAACATTAGTGGAAAGCCTTATTTCAGTTGATGCTTACAGGGAAAATACTGTAAAGATCCTCGAAGAGAAGAGGGATGATTTCTTGTCAGAAGGGTTCAAACTGGTGTTATAG

Protein sequence

MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIRKNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYRILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMKKFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLPELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYRENTVKILEEKRDDFLSEGFKLVL

Homology

[Close]

BLAST of Clc01G10540 vs. NCBI nr
Match: XP_038894348.1 (F-box protein CPR1 [Benincasa hispida] >XP_038894349.1 F-box protein CPR1 [Benincasa hispida])

HSP 1 Score: 711.4 bits (1835), Expect = 4.0e-201
Identity = 347/384 (90.36%), Postives = 365/384 (95.05%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MAD+PLDL+  II RLPAKA+LRFR+VSKIWK LIDCSNFVNLHMKKSIDS+   HLIIR
Sbjct: 24  MADIPLDLVVDIIWRLPAKALLRFRQVSKIWKRLIDCSNFVNLHMKKSIDSQVHCHLIIR 83

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLFSVDLDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRKYR
Sbjct: 84  KNSDLFSVDLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKYR 143

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLP ER  DGVLRF++ESYGFGFDSVHDDFKLLKISQ+IGLEDP+DFDSHVKVFSM+
Sbjct: 144 ILPSLPSERLRDGVLRFAIESYGFGFDSVHDDFKLLKISQFIGLEDPLDFDSHVKVFSMR 203

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIESMTYILRY +KMGVFVNSALHWVVS+NLG  SA+LVVAFDLGTDKF+EIPLP
Sbjct: 204 KFCWMPIESMTYILRYNTKMGVFVNSALHWVVSRNLGMGSADLVVAFDLGTDKFQEIPLP 263

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTDSQCEIHVDVLGGCLC LAN+DR+RFEVWVMKEYGVKESWMKLL VSQVDFVGSIKS
Sbjct: 264 ELTDSQCEIHVDVLGGCLCLLANFDRIRFEVWVMKEYGVKESWMKLLTVSQVDFVGSIKS 323

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPLSYSKTG KVLLLHNRRKL+WYDLHTQ VHDAVIDGLPHSFDAETLVESLISVD YR
Sbjct: 324 VKPLSYSKTGCKVLLLHNRRKLIWYDLHTQKVHDAVIDGLPHSFDAETLVESLISVDTYR 383

Query: 361 ENTV-KILEEKRDDFLSEGFKLVL 384
           ENTV KILEEKRDDFLSEGFKLVL
Sbjct: 384 ENTVKKILEEKRDDFLSEGFKLVL 407

[Close]

BLAST of Clc01G10540 vs. NCBI nr
Match: XP_008458955.1 (PREDICTED: F-box protein CPR30-like [Cucumis melo])

HSP 1 Score: 705.3 bits (1819), Expect = 2.9e-199
Identity = 342/383 (89.30%), Postives = 367/383 (95.82%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI+ IICRLP KAILRFRRVSKIWKCLIDCSNFVNLH+KKSI+S+T  HLIIR
Sbjct: 53  MADVPLDLISDIICRLPTKAILRFRRVSKIWKCLIDCSNFVNLHLKKSIESQTHFHLIIR 112

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 113 KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 172

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPP+RR DGVLRFS+ESYGFGFDSVHDDFKLLKISQ+IGLEDP+DFDSHVKVFSM+
Sbjct: 173 ILPSLPPDRRRDGVLRFSIESYGFGFDSVHDDFKLLKISQFIGLEDPMDFDSHVKVFSMR 232

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIESM YILR +SKMGVFVN+ALHWVVS+NLG E A+LVVAFDLGTD+FE+IPLP
Sbjct: 233 KFCWMPIESMRYILR-SSKMGVFVNNALHWVVSENLGMELADLVVAFDLGTDRFEDIPLP 292

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC LANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 293 ELTDFKCEIHVDVLGGCLCLLANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 352

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 353 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 412

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           E  VKI+EE+RDDFLSEGFKLVL
Sbjct: 413 ETPVKIVEEERDDFLSEGFKLVL 434

[Close]

BLAST of Clc01G10540 vs. NCBI nr
Match: KAA0054323.1 (F-box protein CPR30-like [Cucumis melo var. makuwa] >TYK12359.1 F-box protein CPR30-like [Cucumis melo var. makuwa])

HSP 1 Score: 705.3 bits (1819), Expect = 2.9e-199
Identity = 342/383 (89.30%), Postives = 367/383 (95.82%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI+ IICRLP KAILRFRRVSKIWKCLIDCSNFVNLH+KKSI+S+T  HLIIR
Sbjct: 48  MADVPLDLISDIICRLPTKAILRFRRVSKIWKCLIDCSNFVNLHLKKSIESQTHFHLIIR 107

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 108 KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 167

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPP+RR DGVLRFS+ESYGFGFDSVHDDFKLLKISQ+IGLEDP+DFDSHVKVFSM+
Sbjct: 168 ILPSLPPDRRRDGVLRFSIESYGFGFDSVHDDFKLLKISQFIGLEDPMDFDSHVKVFSMR 227

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIESM YILR +SKMGVFVN+ALHWVVS+NLG E A+LVVAFDLGTD+FE+IPLP
Sbjct: 228 KFCWMPIESMRYILR-SSKMGVFVNNALHWVVSENLGMELADLVVAFDLGTDRFEDIPLP 287

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC LANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 288 ELTDFKCEIHVDVLGGCLCLLANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 347

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 348 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 407

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           E  VKI+EE+RDDFLSEGFKLVL
Sbjct: 408 ETPVKIVEEERDDFLSEGFKLVL 429

[Close]

BLAST of Clc01G10540 vs. NCBI nr
Match: XP_011655060.1 (F-box protein CPR1 [Cucumis sativus] >XP_011655067.1 F-box protein CPR1 [Cucumis sativus] >XP_011655077.1 F-box protein CPR1 [Cucumis sativus] >KGN65062.1 hypothetical protein Csa_013026 [Cucumis sativus])

HSP 1 Score: 696.4 bits (1796), Expect = 1.3e-196
Identity = 337/383 (87.99%), Postives = 362/383 (94.52%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI  IICRLPAKAILRFRRVSKIWK LIDCSNFVNLHMKKSI+S+T  HLIIR
Sbjct: 6   MADVPLDLIADIICRLPAKAILRFRRVSKIWKYLIDCSNFVNLHMKKSIESQTHFHLIIR 65

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 66  KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 125

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPPERR DGVLR   ESYGFGFDSVHDDFKLLKISQ+IGL+DP+DFDSHVKVFS++
Sbjct: 126 ILPSLPPERRRDGVLRIFNESYGFGFDSVHDDFKLLKISQFIGLDDPMDFDSHVKVFSLR 185

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIES +YILRY+S MGVFVN+ALHWVVS+NLG   A+LVVAFDLGT +FEEIPLP
Sbjct: 186 KFCWMPIESTSYILRYSSTMGVFVNNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLP 245

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC +ANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 246 ELTDFKCEIHVDVLGGCLCLIANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 305

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 306 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 365

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           EN +K+LEE+RDDFLSEGFKLVL
Sbjct: 366 ENPIKVLEEERDDFLSEGFKLVL 388

[Close]

BLAST of Clc01G10540 vs. NCBI nr
Match: XP_022142598.1 (F-box protein CPR30 [Momordica charantia])

HSP 1 Score: 594.3 bits (1531), Expect = 7.2e-166
Identity = 294/385 (76.36%), Postives = 334/385 (86.75%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           M DVP++L+  IICRLPAK+ILRFRRVSK WKCLIDCS+FVNL +KKSI++RT   LIIR
Sbjct: 1   MEDVPMELVVDIICRLPAKSILRFRRVSKTWKCLIDCSDFVNLQLKKSIETRTHLRLIIR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           +NS LFSVDLD FD AVEL+HPLMCYGS+I IWGSCNGILCICNVA+DIALWNPSTRKYR
Sbjct: 61  RNSVLFSVDLDPFDCAVELVHPLMCYGSRIRIWGSCNGILCICNVADDIALWNPSTRKYR 120

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPPERR D V RFS+++YGFG+DSVHDDFKLLKISQ+I L +P+D +S VKVFS++
Sbjct: 121 ILPSLPPERRSDDVFRFSVDAYGFGYDSVHDDFKLLKISQFIRL-NPMDIESVVKVFSLR 180

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVS-KNLGTESAELVVAFDLGTDKFEEIPL 240
           KFCW+PI+SMTY LRY+SKMGVFVN ALHWVVS +NLG   A+LVVAF L TDKF+EIPL
Sbjct: 181 KFCWIPIQSMTYSLRYSSKMGVFVNGALHWVVSHQNLGMGVADLVVAFVLATDKFKEIPL 240

Query: 241 PELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIV-SQVDFVGSI 300
           PE TD++CEIHV VLGG LC LANY+R R EVWVMKEYGV+ESW KLL V SQVDF GSI
Sbjct: 241 PEFTDTKCEIHVHVLGGYLCLLANYERARLEVWVMKEYGVQESWTKLLTVGSQVDFDGSI 300

Query: 301 KSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDA 360
           KSVK LSYSKTGR+VLLL NR++L+WYDL  Q V DA I GLPHSF+AETLVESLI +DA
Sbjct: 301 KSVKLLSYSKTGREVLLLQNRKRLIWYDLQNQKVRDAEIGGLPHSFEAETLVESLIPIDA 360

Query: 361 YRENTVKILEEKRDDFLSEGFKLVL 384
           YRE     LE+KR+DFLSEGFKLVL
Sbjct: 361 YREKPENNLEDKREDFLSEGFKLVL 384

[Close]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot
Match: Q9SU30 (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-64
Identity = 154/419 (36.75%), Postives = 230/419 (54.89%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA +P+D++  I  RLPAK ++R R +SK    LI+  +F+  H+ + + +     +++R
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
               L+SVDLD  D   ++ HP M  G    ++GS NG++ + N   D+A++NPSTR+  
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHP-MKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIH 120

Query: 121 ILP----SLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQY-IGLEDPV--DFDSH 180
            LP     LP     DG        YG G+DSV DD+K++++ Q+ I  ED +   F   
Sbjct: 121 RLPPSSIDLP-----DGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYE 180

Query: 181 VKVFSMKKFCWMPIESMT----------YILRYTSKMGVFVNSALHWVVSKNLGTESAEL 240
           VKVFS+KK  W  IES+           Y L Y    GV   ++LHWV+ +  G  +  L
Sbjct: 181 VKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNL 240

Query: 241 VVAFDLGTDKFEEIPLPE-LTDSQCEIHVD--VLGGCLCSLANYDRVRFEVWVMKEYGVK 300
           +V FDL  ++FE +  PE + +   +I +D  VL GCLC + NYD+   +VW+MKEY V+
Sbjct: 241 IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVR 300

Query: 301 ESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGL 360
           +SW K+  V +   V S   ++PL YSK  +KVLL  N  KL+W+DL ++ +    I   
Sbjct: 301 DSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDC 360

Query: 361 PHSFDAETLVESLI--------------SVDAYRENTVKILE--EKRDDFLSEGFKLVL 384
           P S+ AE +V SL+                 A      KI++  ++RDDFLS+GFKLVL
Sbjct: 361 PSSYSAELVVSSLVLGCKGDLNNIKYRKEQQAKEAREAKIMQNTKRRDDFLSKGFKLVL 413

[Close]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot
Match: Q9SUY0 (F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 8.0e-51
Identity = 138/408 (33.82%), Postives = 214/408 (52.45%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA+ P DLI  +  RL A  +++ R +SK    LID   FV+ H+++ +++     +++R
Sbjct: 1   MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
               L +V+LD  +   ++ HPL   G    ++GS NG++ +CN   D+A++NPSTRK  
Sbjct: 61  GPRLLRTVELDSPENVSDIPHPLQA-GGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIH 120

Query: 121 ILPSLP---PERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDS--HVK 180
            LP  P   PER       F    YG G+DSV DDFK+++I Q    E    F     VK
Sbjct: 121 RLPIEPIDFPERDITREYVF----YGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVK 180

Query: 181 VFSMKKFCWMPI----------ESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVV 240
           VFS+KK  W  +           S  Y L      GV VN+ LHW++ +  G  +   ++
Sbjct: 181 VFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAII 240

Query: 241 AFDLGTDKFEEIPLPELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMK 300
            +DL +D    +  P+    +  + + VL GC+C +   +    +VWV+KEY   +SW K
Sbjct: 241 KYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTK 300

Query: 301 LLIVSQVDFVGSIKSVKPLSYSKTGRKVLL-LHNRRKLMWYDLHTQTVHDAVIDGLPHSF 360
           L  V + + V S++ ++PL  SK   K+LL ++N   LMW+DL +Q++  A I+    SF
Sbjct: 301 LYRVPKPESVESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIE-CDSSF 360

Query: 361 DAETLVESLI------SVDAYRENTVKIL---EEKRDDFLSEGFKLVL 384
            A+ LV SL+         A R    K++    ++ D FLS+GFKL L
Sbjct: 361 TADILVSSLVLGCKGDPTQAQRSKDQKMMPKSTKRWDGFLSKGFKLKL 402

[Close]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot
Match: Q8GXC7 (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 124/406 (30.54%), Postives = 195/406 (48.03%), Query Frame = 0


Query: 4   VPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHL---IIR 63
           +P ++IT I+ RLPAK+I RFR VSK++  L     F  +H+   + + + R L   +I 
Sbjct: 36  LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95

Query: 64  KNSDLFSVDLDLFD------PAVELIHPLM-----------------CYGSQ-------- 123
            + +L+S+D +          AVE  +PL                   Y  +        
Sbjct: 96  SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155

Query: 124 -------INIWGSCNGILCICNVAEDIALWNPSTRKYRILPSLPPERRCDGVLRFSLESY 183
                  + I GS NG++CI      + L+NP+T   + LP     +  +   R + ++Y
Sbjct: 156 KSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVE-YERDNFQTY 215

Query: 184 GFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMKKFCWMPIESMTYILR---YTSK 243
           GFGFD + DD+KL+K+      ED +D      V+S+K   W  I ++ Y      YTS 
Sbjct: 216 GFGFDGLTDDYKLVKL--VATSEDILD----ASVYSLKADSWRRICNLNYEHNDGSYTS- 275

Query: 244 MGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLPELTDS----QCEIHVDVLG 303
            GV  N A+HWV +++    +  +VVAFD+ T++F E+P+P+  +          V  L 
Sbjct: 276 -GVHFNGAIHWVFTES--RHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLN 335

Query: 304 GCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLL 360
           G LC + +   V  ++WVM EYG  +SW ++ I          +S+KPL  +K   +V L
Sbjct: 336 GRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIRINL------LYRSMKPLCSTKNDEEV-L 395

[Close]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot
Match: Q9LIR8 (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-24
Identity = 92/367 (25.07%), Postives = 171/367 (46.59%), Query Frame = 0


Query: 3   DVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLH------MKKSIDSRTRRH 62
           ++PL+++  I+ RLP K++ RF+ V   W+ LI  + F   H       K +  +++   
Sbjct: 13  NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYG 72

Query: 63  LIIRKNSDLFSVDL-DLFDPAVELI--HPLMCYG-SQINIWGSCNGILCI-CNVAEDIAL 122
           +I      L S  +  L++ +   +  H     G     + G+C+G++C   +  + + L
Sbjct: 73  VITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYL 132

Query: 123 WNPSTRKYRILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFD 182
           WNP+ +  + L S   E   D      + +YGFG+D   DD+K++ +     L+      
Sbjct: 133 WNPTIKLQQRLSSSDLETSDDE----CVVTYGFGYDESEDDYKVVAL-----LQQRHQVK 192

Query: 183 SHVKVFSMKKFCWMPIESMT--YILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDL 242
              K++S ++  W    S     ++   S+ G+++N  L+W  +    + S+  ++++D+
Sbjct: 193 IETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAAT---SSSSSWTIISYDM 252

Query: 243 GTDKFEEIPLPELTDSQC-EIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLI 302
             D+F+E+P P      C  + +  L GCL  +        +VWVMKE+G   SW KLL 
Sbjct: 253 SRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLS 312

Query: 303 VSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAET 356
           +      G    V+PL  S     V+LL  R  L  Y+      H  V + +    DA+ 
Sbjct: 313 IP-----GLTDFVRPLWIS--DGLVVLLEFRSGLALYNCSNGRFHYPVSNSISGCRDAKV 360

[Close]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 97/388 (25.00%), Postives = 165/388 (42.53%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           +  +P D+I  I  RLP  +I R   V + W+ ++         +  S  S T+  L++ 
Sbjct: 25  LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHG----RLSSSSSSPTKPCLLLH 84

Query: 61  KNS----DLFSVDLDLFDPAVELIHPLMCYGS---QINIWGSCNGILCICN--VAEDIAL 120
            +S     L  +DL   +  ++     + + S   + ++ GSCNG+LC+ +    + + L
Sbjct: 85  CDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYL 144

Query: 121 WNPSTRKYRILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVD-- 180
           +NP T     LP       C          +GFGF  +  ++K+LKI  + G     +  
Sbjct: 145 YNPFTTNSLELP------ECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGI 204

Query: 181 ---------FDSHVKVFSM------KKFCWMPIESMTY-ILRYTSKMGVFVNSALHWVVS 240
                      S V++ ++      +   W  +    Y  ++ +S+    VN  LH+V  
Sbjct: 205 YRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSE--ALVNGRLHFVTR 264

Query: 241 KNLGTESAELVVAFDLGTDKFEEIPLPELTDSQCEIHVDV-LGGCLCSLANYDRVRFEVW 300
                   +  V+FDL  ++F+EIP P+        H  V L GCLC++   +  + ++W
Sbjct: 265 PRRHVPDRKF-VSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIW 324

Query: 301 VMKEYGVKESWMKLLIVSQVDFVG----------------SIKSVKPLSYSKTGRKVLLL 345
           VMK YGVKESW K   +      G                + K V+ L   + G ++LL 
Sbjct: 325 VMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENG-EILLE 384

[Close]

BLAST of Clc01G10540 vs. ExPASy TrEMBL
Match: A0A5A7UE93 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001360 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.4e-199
Identity = 342/383 (89.30%), Postives = 367/383 (95.82%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI+ IICRLP KAILRFRRVSKIWKCLIDCSNFVNLH+KKSI+S+T  HLIIR
Sbjct: 48  MADVPLDLISDIICRLPTKAILRFRRVSKIWKCLIDCSNFVNLHLKKSIESQTHFHLIIR 107

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 108 KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 167

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPP+RR DGVLRFS+ESYGFGFDSVHDDFKLLKISQ+IGLEDP+DFDSHVKVFSM+
Sbjct: 168 ILPSLPPDRRRDGVLRFSIESYGFGFDSVHDDFKLLKISQFIGLEDPMDFDSHVKVFSMR 227

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIESM YILR +SKMGVFVN+ALHWVVS+NLG E A+LVVAFDLGTD+FE+IPLP
Sbjct: 228 KFCWMPIESMRYILR-SSKMGVFVNNALHWVVSENLGMELADLVVAFDLGTDRFEDIPLP 287

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC LANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 288 ELTDFKCEIHVDVLGGCLCLLANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 347

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 348 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 407

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           E  VKI+EE+RDDFLSEGFKLVL
Sbjct: 408 ETPVKIVEEERDDFLSEGFKLVL 429

[Close]

BLAST of Clc01G10540 vs. ExPASy TrEMBL
Match: A0A1S3C8K9 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103498215 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.4e-199
Identity = 342/383 (89.30%), Postives = 367/383 (95.82%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI+ IICRLP KAILRFRRVSKIWKCLIDCSNFVNLH+KKSI+S+T  HLIIR
Sbjct: 53  MADVPLDLISDIICRLPTKAILRFRRVSKIWKCLIDCSNFVNLHLKKSIESQTHFHLIIR 112

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 113 KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 172

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPP+RR DGVLRFS+ESYGFGFDSVHDDFKLLKISQ+IGLEDP+DFDSHVKVFSM+
Sbjct: 173 ILPSLPPDRRRDGVLRFSIESYGFGFDSVHDDFKLLKISQFIGLEDPMDFDSHVKVFSMR 232

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIESM YILR +SKMGVFVN+ALHWVVS+NLG E A+LVVAFDLGTD+FE+IPLP
Sbjct: 233 KFCWMPIESMRYILR-SSKMGVFVNNALHWVVSENLGMELADLVVAFDLGTDRFEDIPLP 292

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC LANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 293 ELTDFKCEIHVDVLGGCLCLLANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 352

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 353 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 412

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           E  VKI+EE+RDDFLSEGFKLVL
Sbjct: 413 ETPVKIVEEERDDFLSEGFKLVL 434

[Close]

BLAST of Clc01G10540 vs. ExPASy TrEMBL
Match: A0A0A0LW75 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G186670 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.5e-197
Identity = 337/383 (87.99%), Postives = 362/383 (94.52%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MADVPLDLI  IICRLPAKAILRFRRVSKIWK LIDCSNFVNLHMKKSI+S+T  HLIIR
Sbjct: 6   MADVPLDLIADIICRLPAKAILRFRRVSKIWKYLIDCSNFVNLHMKKSIESQTHFHLIIR 65

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           KNSDLF+V+LDLFDPAVELIHPLMCYGS+INIWGSCNGILCICNVAEDIALWNPSTRK+R
Sbjct: 66  KNSDLFTVNLDLFDPAVELIHPLMCYGSRINIWGSCNGILCICNVAEDIALWNPSTRKHR 125

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPPERR DGVLR   ESYGFGFDSVHDDFKLLKISQ+IGL+DP+DFDSHVKVFS++
Sbjct: 126 ILPSLPPERRRDGVLRIFNESYGFGFDSVHDDFKLLKISQFIGLDDPMDFDSHVKVFSLR 185

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLP 240
           KFCWMPIES +YILRY+S MGVFVN+ALHWVVS+NLG   A+LVVAFDLGT +FEEIPLP
Sbjct: 186 KFCWMPIESTSYILRYSSTMGVFVNNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLP 245

Query: 241 ELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKS 300
           ELTD +CEIHVDVLGGCLC +ANYDRVRFEVWVMKEYGV+ESWMKLL VSQVDFVGSIKS
Sbjct: 246 ELTDFKCEIHVDVLGGCLCLIANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKS 305

Query: 301 VKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 360
           VKPL+YSKTG KVLLLHNRRKL+WYDL TQTVHDAVIDGLPHSFDAETLVESLISVDAYR
Sbjct: 306 VKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTVHDAVIDGLPHSFDAETLVESLISVDAYR 365

Query: 361 ENTVKILEEKRDDFLSEGFKLVL 384
           EN +K+LEE+RDDFLSEGFKLVL
Sbjct: 366 ENPIKVLEEERDDFLSEGFKLVL 388

[Close]

BLAST of Clc01G10540 vs. ExPASy TrEMBL
Match: A0A6J1CNM9 (F-box protein CPR30 OS=Momordica charantia OX=3673 GN=LOC111012674 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.5e-166
Identity = 294/385 (76.36%), Postives = 334/385 (86.75%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           M DVP++L+  IICRLPAK+ILRFRRVSK WKCLIDCS+FVNL +KKSI++RT   LIIR
Sbjct: 1   MEDVPMELVVDIICRLPAKSILRFRRVSKTWKCLIDCSDFVNLQLKKSIETRTHLRLIIR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           +NS LFSVDLD FD AVEL+HPLMCYGS+I IWGSCNGILCICNVA+DIALWNPSTRKYR
Sbjct: 61  RNSVLFSVDLDPFDCAVELVHPLMCYGSRIRIWGSCNGILCICNVADDIALWNPSTRKYR 120

Query: 121 ILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMK 180
           ILPSLPPERR D V RFS+++YGFG+DSVHDDFKLLKISQ+I L +P+D +S VKVFS++
Sbjct: 121 ILPSLPPERRSDDVFRFSVDAYGFGYDSVHDDFKLLKISQFIRL-NPMDIESVVKVFSLR 180

Query: 181 KFCWMPIESMTYILRYTSKMGVFVNSALHWVVS-KNLGTESAELVVAFDLGTDKFEEIPL 240
           KFCW+PI+SMTY LRY+SKMGVFVN ALHWVVS +NLG   A+LVVAF L TDKF+EIPL
Sbjct: 181 KFCWIPIQSMTYSLRYSSKMGVFVNGALHWVVSHQNLGMGVADLVVAFVLATDKFKEIPL 240

Query: 241 PELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIV-SQVDFVGSI 300
           PE TD++CEIHV VLGG LC LANY+R R EVWVMKEYGV+ESW KLL V SQVDF GSI
Sbjct: 241 PEFTDTKCEIHVHVLGGYLCLLANYERARLEVWVMKEYGVQESWTKLLTVGSQVDFDGSI 300

Query: 301 KSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVDA 360
           KSVK LSYSKTGR+VLLL NR++L+WYDL  Q V DA I GLPHSF+AETLVESLI +DA
Sbjct: 301 KSVKLLSYSKTGREVLLLQNRKRLIWYDLQNQKVRDAEIGGLPHSFEAETLVESLIPIDA 360

Query: 361 YRENTVKILEEKRDDFLSEGFKLVL 384
           YRE     LE+KR+DFLSEGFKLVL
Sbjct: 361 YREKPENNLEDKREDFLSEGFKLVL 384

[Close]

BLAST of Clc01G10540 vs. ExPASy TrEMBL
Match: A0A6J5X241 (F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS24158 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.5e-105
Identity = 195/393 (49.62%), Postives = 273/393 (69.47%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA++P ++I  I+ RL    +L FR ++K W+ LID   FV+LH++KS ++++   LI+R
Sbjct: 18  MAELPPEVIINILSRLQVGRLLCFRSIAKTWRSLIDSPYFVDLHLEKSAEAKSHLSLILR 77

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
           K+SDL+ ++ D  D AVEL HPLMCY ++I + GSCNG+LCICNVAEDIALWNPST+KYR
Sbjct: 78  KDSDLYYINFDSLDDAVELNHPLMCYSNRIRVLGSCNGLLCICNVAEDIALWNPSTKKYR 137

Query: 121 ILPSLPPERRCD-GVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSM 180
           +LPSLP +R+ D G+       YG G+D+ HDD+KL++ISQ+IGL D + F+S VKV+S+
Sbjct: 138 VLPSLPSDRKRDSGMCLCGARVYGLGYDAGHDDYKLVRISQFIGL-DYLSFESEVKVYSL 197

Query: 181 KKFCWMPIESMTYILRYTSKMGVFVNSALHWVVSKNLGTE--SAELVVAFDLGTDKFEEI 240
           +   W  +E M Y+L YT KMG+ V+  +HWVV++ L  +  + ELV+AFD+  + F E+
Sbjct: 198 RNNAWKKVEDMPYVLCYTRKMGILVSGCVHWVVTRQLELDQLATELVIAFDIVKETFREV 257

Query: 241 PLPELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGS 300
           P+PE  + +C+I V  LGGCLC +A Y+    +VW +KEYGVKESW KLL ++Q      
Sbjct: 258 PMPESMNRKCQIDVGYLGGCLCIVAKYEDAGVDVWTLKEYGVKESWSKLLTLTQ---ARR 317

Query: 301 IKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAETLVESLISVD 360
           IKSV+PL YSK GR+VLL  +   L+W+DL +Q V +  + GLP  F+A   +ESL+SV 
Sbjct: 318 IKSVRPLVYSKNGREVLLEQDHENLVWFDLKSQRVKNVKVRGLPDLFEAVVCMESLVSVH 377

Query: 361 AYRENTVKILE-------EKRDDFLSEGFKLVL 384
             R +  K  E       +KRDDFL+EGFKLVL
Sbjct: 378 PSRRDDRKKQESVGGRKNKKRDDFLAEGFKLVL 406

[Close]

BLAST of Clc01G10540 vs. TAIR 10
Match: AT4G12560.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 248.4 bits (633), Expect = 9.0e-66
Identity = 154/419 (36.75%), Postives = 230/419 (54.89%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA +P+D++  I  RLPAK ++R R +SK    LI+  +F+  H+ + + +     +++R
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
               L+SVDLD  D   ++ HP M  G    ++GS NG++ + N   D+A++NPSTR+  
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHP-MKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIH 120

Query: 121 ILP----SLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQY-IGLEDPV--DFDSH 180
            LP     LP     DG        YG G+DSV DD+K++++ Q+ I  ED +   F   
Sbjct: 121 RLPPSSIDLP-----DGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYE 180

Query: 181 VKVFSMKKFCWMPIESMT----------YILRYTSKMGVFVNSALHWVVSKNLGTESAEL 240
           VKVFS+KK  W  IES+           Y L Y    GV   ++LHWV+ +  G  +  L
Sbjct: 181 VKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNL 240

Query: 241 VVAFDLGTDKFEEIPLPE-LTDSQCEIHVD--VLGGCLCSLANYDRVRFEVWVMKEYGVK 300
           +V FDL  ++FE +  PE + +   +I +D  VL GCLC + NYD+   +VW+MKEY V+
Sbjct: 241 IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVR 300

Query: 301 ESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGL 360
           +SW K+  V +   V S   ++PL YSK  +KVLL  N  KL+W+DL ++ +    I   
Sbjct: 301 DSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDC 360

Query: 361 PHSFDAETLVESLI--------------SVDAYRENTVKILE--EKRDDFLSEGFKLVL 384
           P S+ AE +V SL+                 A      KI++  ++RDDFLS+GFKLVL
Sbjct: 361 PSSYSAELVVSSLVLGCKGDLNNIKYRKEQQAKEAREAKIMQNTKRRDDFLSKGFKLVL 413

[Close]

BLAST of Clc01G10540 vs. TAIR 10
Match: AT4G12560.2 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 248.4 bits (633), Expect = 9.0e-66
Identity = 154/419 (36.75%), Postives = 230/419 (54.89%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA +P+D++  I  RLPAK ++R R +SK    LI+  +F+  H+ + + +     +++R
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
               L+SVDLD  D   ++ HP M  G    ++GS NG++ + N   D+A++NPSTR+  
Sbjct: 61  GALRLYSVDLDSLDSVSDVEHP-MKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIH 120

Query: 121 ILP----SLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQY-IGLEDPV--DFDSH 180
            LP     LP     DG        YG G+DSV DD+K++++ Q+ I  ED +   F   
Sbjct: 121 RLPPSSIDLP-----DGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYE 180

Query: 181 VKVFSMKKFCWMPIESMT----------YILRYTSKMGVFVNSALHWVVSKNLGTESAEL 240
           VKVFS+KK  W  IES+           Y L Y    GV   ++LHWV+ +  G  +  L
Sbjct: 181 VKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNL 240

Query: 241 VVAFDLGTDKFEEIPLPE-LTDSQCEIHVD--VLGGCLCSLANYDRVRFEVWVMKEYGVK 300
           +V FDL  ++FE +  PE + +   +I +D  VL GCLC + NYD+   +VW+MKEY V+
Sbjct: 241 IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVR 300

Query: 301 ESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGL 360
           +SW K+  V +   V S   ++PL YSK  +KVLL  N  KL+W+DL ++ +    I   
Sbjct: 301 DSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDC 360

Query: 361 PHSFDAETLVESLI--------------SVDAYRENTVKILE--EKRDDFLSEGFKLVL 384
           P S+ AE +V SL+                 A      KI++  ++RDDFLS+GFKLVL
Sbjct: 361 PSSYSAELVVSSLVLGCKGDLNNIKYRKEQQAKEAREAKIMQNTKRRDDFLSKGFKLVL 413

[Close]

BLAST of Clc01G10540 vs. TAIR 10
Match: AT4G22390.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 202.6 bits (514), Expect = 5.7e-52
Identity = 138/408 (33.82%), Postives = 214/408 (52.45%), Query Frame = 0


Query: 1   MADVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHLIIR 60
           MA+ P DLI  +  RL A  +++ R +SK    LID   FV+ H+++ +++     +++R
Sbjct: 1   MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLR 60

Query: 61  KNSDLFSVDLDLFDPAVELIHPLMCYGSQINIWGSCNGILCICNVAEDIALWNPSTRKYR 120
               L +V+LD  +   ++ HPL   G    ++GS NG++ +CN   D+A++NPSTRK  
Sbjct: 61  GPRLLRTVELDSPENVSDIPHPLQA-GGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIH 120

Query: 121 ILPSLP---PERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFDS--HVK 180
            LP  P   PER       F    YG G+DSV DDFK+++I Q    E    F     VK
Sbjct: 121 RLPIEPIDFPERDITREYVF----YGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVK 180

Query: 181 VFSMKKFCWMPI----------ESMTYILRYTSKMGVFVNSALHWVVSKNLGTESAELVV 240
           VFS+KK  W  +           S  Y L      GV VN+ LHW++ +  G  +   ++
Sbjct: 181 VFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAII 240

Query: 241 AFDLGTDKFEEIPLPELTDSQCEIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMK 300
            +DL +D    +  P+    +  + + VL GC+C +   +    +VWV+KEY   +SW K
Sbjct: 241 KYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTK 300

Query: 301 LLIVSQVDFVGSIKSVKPLSYSKTGRKVLL-LHNRRKLMWYDLHTQTVHDAVIDGLPHSF 360
           L  V + + V S++ ++PL  SK   K+LL ++N   LMW+DL +Q++  A I+    SF
Sbjct: 301 LYRVPKPESVESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIE-CDSSF 360

Query: 361 DAETLVESLI------SVDAYRENTVKIL---EEKRDDFLSEGFKLVL 384
            A+ LV SL+         A R    K++    ++ D FLS+GFKL L
Sbjct: 361 TADILVSSLVLGCKGDPTQAQRSKDQKMMPKSTKRWDGFLSKGFKLKL 402

[Close]

BLAST of Clc01G10540 vs. TAIR 10
Match: AT3G06240.1 (F-box family protein )

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-33
Identity = 124/406 (30.54%), Postives = 195/406 (48.03%), Query Frame = 0


Query: 4   VPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLHMKKSIDSRTRRHL---IIR 63
           +P ++IT I+ RLPAK+I RFR VSK++  L     F  +H+   + + + R L   +I 
Sbjct: 36  LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95

Query: 64  KNSDLFSVDLDLFD------PAVELIHPLM-----------------CYGSQ-------- 123
            + +L+S+D +          AVE  +PL                   Y  +        
Sbjct: 96  SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155

Query: 124 -------INIWGSCNGILCICNVAEDIALWNPSTRKYRILPSLPPERRCDGVLRFSLESY 183
                  + I GS NG++CI      + L+NP+T   + LP     +  +   R + ++Y
Sbjct: 156 KSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVE-YERDNFQTY 215

Query: 184 GFGFDSVHDDFKLLKISQYIGLEDPVDFDSHVKVFSMKKFCWMPIESMTYILR---YTSK 243
           GFGFD + DD+KL+K+      ED +D      V+S+K   W  I ++ Y      YTS 
Sbjct: 216 GFGFDGLTDDYKLVKL--VATSEDILD----ASVYSLKADSWRRICNLNYEHNDGSYTS- 275

Query: 244 MGVFVNSALHWVVSKNLGTESAELVVAFDLGTDKFEEIPLPELTDS----QCEIHVDVLG 303
            GV  N A+HWV +++    +  +VVAFD+ T++F E+P+P+  +          V  L 
Sbjct: 276 -GVHFNGAIHWVFTES--RHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLN 335

Query: 304 GCLCSLANYDRVRFEVWVMKEYGVKESWMKLLIVSQVDFVGSIKSVKPLSYSKTGRKVLL 360
           G LC + +   V  ++WVM EYG  +SW ++ I          +S+KPL  +K   +V L
Sbjct: 336 GRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIRINL------LYRSMKPLCSTKNDEEV-L 395

[Close]

BLAST of Clc01G10540 vs. TAIR 10
Match: AT3G23880.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-25
Identity = 92/367 (25.07%), Postives = 171/367 (46.59%), Query Frame = 0


Query: 3   DVPLDLITYIICRLPAKAILRFRRVSKIWKCLIDCSNFVNLH------MKKSIDSRTRRH 62
           ++PL+++  I+ RLP K++ RF+ V   W+ LI  + F   H       K +  +++   
Sbjct: 13  NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYG 72

Query: 63  LIIRKNSDLFSVDL-DLFDPAVELI--HPLMCYG-SQINIWGSCNGILCI-CNVAEDIAL 122
           +I      L S  +  L++ +   +  H     G     + G+C+G++C   +  + + L
Sbjct: 73  VITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYL 132

Query: 123 WNPSTRKYRILPSLPPERRCDGVLRFSLESYGFGFDSVHDDFKLLKISQYIGLEDPVDFD 182
           WNP+ +  + L S   E   D      + +YGFG+D   DD+K++ +     L+      
Sbjct: 133 WNPTIKLQQRLSSSDLETSDDE----CVVTYGFGYDESEDDYKVVAL-----LQQRHQVK 192

Query: 183 SHVKVFSMKKFCWMPIESMT--YILRYTSKMGVFVNSALHWVVSKNLGTESAELVVAFDL 242
              K++S ++  W    S     ++   S+ G+++N  L+W  +    + S+  ++++D+
Sbjct: 193 IETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAAT---SSSSSWTIISYDM 252

Query: 243 GTDKFEEIPLPELTDSQC-EIHVDVLGGCLCSLANYDRVRFEVWVMKEYGVKESWMKLLI 302
             D+F+E+P P      C  + +  L GCL  +        +VWVMKE+G   SW KLL 
Sbjct: 253 SRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLS 312

Query: 303 VSQVDFVGSIKSVKPLSYSKTGRKVLLLHNRRKLMWYDLHTQTVHDAVIDGLPHSFDAET 356
           +      G    V+PL  S     V+LL  R  L  Y+      H  V + +    DA+ 
Sbjct: 313 IP-----GLTDFVRPLWIS--DGLVVLLEFRSGLALYNCSNGRFHYPVSNSISGCRDAKV 360

The following BLAST results are available for this feature:

BLAST of Clc01G10540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894348.1	4.0e-201	90.36	F-box protein CPR1 [Benincasa hispida] >XP_038894349.1 F-box protein CPR1 [Benin...	[more]
XP_008458955.1	2.9e-199	89.30	PREDICTED: F-box protein CPR30-like [Cucumis melo]	[more]
KAA0054323.1	2.9e-199	89.30	F-box protein CPR30-like [Cucumis melo var. makuwa] >TYK12359.1 F-box protein CP...	[more]
XP_011655060.1	1.3e-196	87.99	F-box protein CPR1 [Cucumis sativus] >XP_011655067.1 F-box protein CPR1 [Cucumis...	[more]
XP_022142598.1	7.2e-166	76.36	F-box protein CPR30 [Momordica charantia]	[more]

BLAST of Clc01G10540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU30	1.3e-64	36.75	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	[more]
Q9SUY0	8.0e-51	33.82	F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3	[more]
Q8GXC7	2.9e-32	30.54	F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g0624...	[more]
Q9LIR8	2.9e-24	25.07	F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g2388...	[more]
Q9SFC7	1.1e-18	25.00	F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1	[more]

BLAST of Clc01G10540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UE93	1.4e-199	89.30	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C8K9	1.4e-199	89.30	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103498215 PE=4 SV=1	[more]
A0A0A0LW75	6.5e-197	87.99	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G186670 PE=4 ...	[more]
A0A6J1CNM9	3.5e-166	76.36	F-box protein CPR30 OS=Momordica charantia OX=3673 GN=LOC111012674 PE=4 SV=1	[more]
A0A6J5X241	1.5e-105	49.62	F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS2...	[more]

BLAST of Clc01G10540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12560.1	9.0e-66	36.75	F-box and associated interaction domains-containing protein	[more]
AT4G12560.2	9.0e-66	36.75	F-box and associated interaction domains-containing protein	[more]
AT4G22390.1	5.7e-52	33.82	F-box associated ubiquitination effector family protein	[more]
AT3G06240.1	2.0e-33	30.54	F-box family protein	[more]
AT3G23880.1	2.0e-25	25.07	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 e-value: 0.0011 score: 28.2
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..37 e-value: 8.8E-7 score: 28.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..43 score: 9.417986
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 95..327 e-value: 2.4E-29 score: 100.3
None	No IPR available	PANTHER	PTHR31790:SF161	F-BOX PROTEIN CPR1	coord: 1..364
None	No IPR available	PANTHER	PTHR31790	OS02G0783600 PROTEIN	coord: 1..364
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc01G10540.1	Clc01G10540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding