Clc01G09850 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGTAAGCTTGCAAAGCCCAATTTTCTCTTAATATATTCATTTTCATTTCTATGTTGTCATTTTGACTCATATCTACCCAATTACTCAATTTTTTTAGGGTTAATAGGTTAAACTATTATTTTAATATTTATTGAAACAAATTTCAAAATATAGAGACCAAATTGGTCTTTTATAACTTCTATAATATTAATAGTATCAACAACATGAAGCAATATTTCTAGAGTACTATATAATTTTCTTTCTTATTAGGCTATAATAAACTGCATAGCATCTTCTGTTATTAGGCTTAACTTAATTGTATATATATCATGATTGTTAGTAATGAATAATCATATTAAATAAGTATTTTATTAAATTAATACTTTTTGATATTTTTCAACATTTTAAAATTCCCAACTTATTTTTAATCCAAATTTAAAGTTTCCAAATGGTTCGGTTTTGTTCATAGGATCAATAATGGGCTAATAAAATTTAACAATAGACTTTGGGGTATAGTATTTTATAATTTGGTTGAAATATAGTTGCGTTTGATATACCTTTTAATATAGCATTTCATTTGATGATTCACAATCTTTCAGGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGTAAGCTTCGACTTCCTAATTTTCATCTAATCTATTATATTTTTATGGTACTTAGAAGTGAAATTCAACTTTAATTTATCAACCTAACATAATTTAAATAATTTAGGTATATACTTTCTGAAAAAAATAGTAGAAATTCTAATCATATACCATATATGCTGAACTCCAAAAAGAAAAAAAAAAATTAAGAAGAAAGGAAACATAATATATTGATTTTAATTTCATTCACTCTCACTTTAATGATATTGTTGTGAAAAAACGAAAAGAAAAATAAATCGTCTTTTTTATAAATCCTTTAGGGGTGTTTGGGAAATTGTAATAGTATAGACTTGTAATATAATATAATCTAAAATGAATGTTTGGATTGAGCATTTTAAGCTCGATTTGTAATACAAAAGTCATTCTGTTCCGACAGTTTTCAACTTGATCCTATTTCCCGCCATTTCCATGGTTCGCGATTTCATTTCGTTTATTCTTTTTAAGTGCTTTGGCATTCCAATAATCTTCTAATTACCAGTAATCCTATTACATTTCAGCTCCCCAACCAACTACTTACTATGTTTGGTCTTATTATTTCTTAGGTTAAAAATTTATATCTCACCCCACGTGTTGAAATAAAAAAATAAAAAATAAAAAAGTTTATTTATTTTATTTTTACTCACTCTCAAATAATTGAAATTTGTTGTAGAAAACACGAAAAGAAAAATAATAAATTGTCATCTTGACGAATCCCTCCTCGTGTTTTGCTGTATTAGTTTTTACGGTGTCATATACTTTCAACGAAGAGGACAAAAGTTGTAATCCTTTCAAACAAAAGAAAAAGTTTGTTTATTTTAATTTTATTCACCCTCAATATATTGAAAAAAAAAAAAAGGAAAAATAAATTGTCCTCTTGACCAATCCCTCCTTGTGTTTAACTTTGTTACTTTTCTATAGAGTGGTATATCTATATACCCACATGTCAAATTCAAATAAAAATATTTTTAACTAAAATGAATAAATTAATCCCTAAACTTTAGTGGGTGACAATTTACTTTTTGTATTTTCAAATTTTTTATAATTTAGTACTTAGAATTTACTATCTAACGATTTAGTCCCTTTTGCAACAATTTTCAACAAAATTAGGGATCAACAATTATTATGTAAAGACTTAGTTTTTATAGTTTATAACTAAGTTTGATTCACTATCAATTTATTAATCTACACGTGTAACAAATTTTATTAAACCATACTAATATCTTTCACGATAGGAACTAAATTAACAAATTTGTAAAATATAAGAACAAGTGAAATCGTTACTTATAAAGTTCATTGAGTAAATTGTTACCGATTATAAAGTACATAGACTTAACTATTATCAACTAAAGTTCAGAAACGGTTACTTCCATAAAAATTTAGGAATCAAAAGTGTTTTTTAACCAATTATTCACTCTCAACTTATTGTTTCTTCAGTAGGAAAAAAAAAAAAAAAGAAAGAAAAAGAATTAATTGTGTTATATTTATTCTTGATTCTCCAACAATTTTCTTGACTTTTTAGAGAGTCTGAACTTGTAGGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAA ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAA ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAA MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQSK Homology
BLAST of Clc01G09850 vs. NCBI nr
Match: XP_038896030.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67 Identity = 128/179 (71.51%), Postives = 149/179 (83.24%), Query Frame = 0
BLAST of Clc01G09850 vs. NCBI nr
Match: XP_008459053.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]) HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60 Identity = 122/192 (63.54%), Postives = 138/192 (71.88%), Query Frame = 0
BLAST of Clc01G09850 vs. NCBI nr
Match: XP_004151321.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66904.1 hypothetical protein Csa_007408 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 4.7e-57 Identity = 118/195 (60.51%), Postives = 142/195 (72.82%), Query Frame = 0
BLAST of Clc01G09850 vs. NCBI nr
Match: XP_022142573.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Momordica charantia]) HSP 1 Score: 202.2 bits (513), Expect = 4.0e-48 Identity = 106/183 (57.92%), Postives = 125/183 (68.31%), Query Frame = 0
BLAST of Clc01G09850 vs. NCBI nr
Match: XP_022994899.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]) HSP 1 Score: 199.5 bits (506), Expect = 2.6e-47 Identity = 104/178 (58.43%), Postives = 128/178 (71.91%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33 Identity = 79/182 (43.41%), Postives = 107/182 (58.79%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10 Identity = 44/111 (39.64%), Postives = 56/111 (50.45%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy Swiss-Prot
Match: Q9FJ80 (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.2e-04 Identity = 23/63 (36.51%), Postives = 32/63 (50.79%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy TrEMBL
Match: A0A1S3C8T6 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498275 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60 Identity = 122/192 (63.54%), Postives = 138/192 (71.88%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy TrEMBL
Match: A0A0A0M0X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G709160 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.3e-57 Identity = 118/195 (60.51%), Postives = 142/195 (72.82%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy TrEMBL
Match: A0A6J1CNK5 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012653 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.9e-48 Identity = 106/183 (57.92%), Postives = 125/183 (68.31%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy TrEMBL
Match: A0A6J1K456 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490487 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47 Identity = 104/178 (58.43%), Postives = 128/178 (71.91%), Query Frame = 0
BLAST of Clc01G09850 vs. ExPASy TrEMBL
Match: A0A6J1GSJ8 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456742 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 3.1e-46 Identity = 99/177 (55.93%), Postives = 121/177 (68.36%), Query Frame = 0
BLAST of Clc01G09850 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34 Identity = 79/182 (43.41%), Postives = 107/182 (58.79%), Query Frame = 0
BLAST of Clc01G09850 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32 Identity = 76/163 (46.63%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of Clc01G09850 vs. TAIR 10
Match: AT5G52120.1 (phloem protein 2-A14 ) HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05 Identity = 23/63 (36.51%), Postives = 32/63 (50.79%), Query Frame = 0
BLAST of Clc01G09850 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 ) HSP 1 Score: 43.1 bits (100), Expect = 2.9e-04 Identity = 24/86 (27.91%), Postives = 40/86 (46.51%), Query Frame = 0
BLAST of Clc01G09850 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 ) HSP 1 Score: 43.1 bits (100), Expect = 2.9e-04 Identity = 25/81 (30.86%), Postives = 38/81 (46.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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