Clc01G07460 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAGAATCCAACACGGGGTTTCACCGGGACGAAACGTTAAGTTCCGCTTTGAATCGGCACGCTATATCTTTTCAGTCTACTGCAACAACTAGCAGCTCAGAGATGATGACAATGGGGAACTATTTTGGGGTCAACAACGCGTCGGCCATAATGTTTTCGGGGAATTCAAGCGTCGTCAACAATAACAACAACCATCCTGTTATCAGCCAAGCTACCAATTCATCTGGTTCTCTGCTTCTTGACACGGTGCCAGGGCTCAAGCATGATGCTGGGTTGGCAGTCGAATGGTCCGTGGAAGAGCAATTCAAATTGGAGGAAGGTCTTGTCATGTAGGTTCTTTCTTTTTATGTTCCTGTCGGGATTTTTGGCTTTAGGATTGTTGAAATTTATGTGAAGAGCTGTCTTGGAGGAGAATTTTCAGTGTTATAGAACTCTCCACGTCTTTGTTTTATATCGGTTCTGTTATGTGATATATTGAAATAATCTAAATAATGATACATACATAGAGAAAGGTGCATGGATTTTATATAAGAATTGGAATCCAATTATTGTTTTATATTATCCCCTTACATGTGGTTTCTTGTCCCTTTGATGTTCTTTTTATGTTAAGTCAGCCATTCTTCCTAGACTGCTTGATAAATTAAAGTTCTTCTCATGCGTAGTCTATTTTTCTTTCTTGTTATATCAATAAAACTATGGAGATATCAAAGGTCATTCTTTCTTTCTTTCTTTCTGTCTTAATTGCAATTATCAACTTTCATTTTACAGTATTTTCTATATTGTTTGCTTGCCATTTGATAGGTTTGCTGATGAACCAAGCATTTTGAGGTATATCAAGATTGCTGCCACGTTACGTGATAAAACAGTCCGGGATGTTGCCTTAAGGTGTAGGTGGATGACTGTAAGCACCTCAATCTTATAAAATACTTCTCTGTATTATGATTGTGACTTACGTATGAGTTATATCTTAATAGAAGTTATTTGGGATTCATTATTTTGTGGACAATATGGAACTAGGATGACTTTAGGCGGCACCAAGCACAACTCCCAAAGTTTTCCTTCACTTGAATGCAAAATAGTTTCTATATATAGTTACGAGCAATGCTTTCAAAAAGCCACTTTTTATTATTATTATTTTTTAAAAGGGAATTCTGTTTGTTGCCAAATTTCATGATACCAAAAGATTTTGTGTTACTGTTGCCTTTTCTATTACATTTTGTGAAAGCTTTTTCTGTGTAAGATACCATTGGCCTGCCCTCTTCGAGTTCATATAGAAGTCTAACAAACTTCTTTACAGAGAAAACGAAGAAAGCCCGAAGAACCTATTGGAAAGAAAGTGAACAATCGAAAGGTATTTTGATGAAATTTTATGTGTGTGTGATGTTTGTTCTGCTAGTAAATTTATTTTGATGTTTTTATTTGCCATCATTTATTTTTCTATTTTGGAGAAAATCAAAATGGCTAGCACAGATGAAATTGTTGAAAATCTTATAAAATCCTGTGTTTTAACACTCAAATGTTGAAAATGACAACATATAAGGTTACTTGGGTTCCATAAATTTTTTAAATCATTGGTTAATCTATTTAATAATTCCCTGACAGTTTCCGGCTTTTGGTTTATGCCGATGCCTGGAGCTTAAAACTTTTCAGAACAAGACGTATAGCTTCTGTTAGCTTTTTGGGATACATTGCCACTCTGGTCAGACAATATTATTAGTTGTTAAGTTGCACAACCTGTTCAAGAGAATTTTATTCTTTCAATTAATTTCTACATTCACTGGTTAATGTATCTACTTCAGTAGTTTAATGTTTAAACTACTTATAGGACACTAAGTTGAAGTATGGGTTCAAATAAACAATTTTTTGAAGTTTCCAACGGTAGTGGTAGTTTTTGTTAGAGTTTCCTCTAAATCTCTACGATCCATTTGAAGATCCAATTTCCTAATGATTGTGAATGTTCAGGATAAACTGGTGGAGCCATCTTTAAAAATAAACACACCTTCAGCCCCTGGACCCAGCATGGCTGCATATTCTCATATGATGCATCATATGAACAGAAAAGAACGTACGCCTTCTGAAGGTTAGCATTTTTTGAAATTTTCTTCCTCTATACTTCTTTATAGTAGCTCTTAGCAACCAAAAATTATTCAAGCTTCTATTGAGACGTTTCTTTTCATCAAAGTCTCAGAGATTAGCAGTGCAGCAGCGCATCTTCTGGAACAGAATGCTCAAGCTTTTAGTCAAATTACTTCCAACCTTTCCATGTACAAGGTGAATATCTGTTAGCTTTTGATGGGGACTGTTTGCTACATGAACCATTTGCAGTTCATATTAGTAGTTAGCCTTGAATGGGAATCATTTTGTTTTAATATTGGACTACACCATCACGTTTCACCTACCTAGAATAAGTTTACTCATTATTCTGAGCTTTACTTTTTAAGTTAAACTTCATATAATCTGAAAACAGATGAAGGCCCGTCTGTTTTTTTTTTTCCTTAATTTCCCTTTTGATGAAATCACATGGAAGAATCTTTGTCTGTTAGCTTATCATGTAGCCCTTCTGTGGATGCAATTATACAATTGTTGCTTGGCTAATAAAGGCATGAGAATGAAGTGATGGAGAGGACTTGGATAATTTTGCAGGGTTTCAAAAATTTCATGAATGCAAAATGTCAACACTACACTCCTGAAGGAATGCACTTTTCTGTCACTTTCTGAGACACATAAATGATACCTCGGTATAAACCGAATATGAAGCTTAGAAACATCCAAACCATTTTCACAATTCTGGTAGTTCATTGATGTTGATTGTATCCTATCGAAGGGAGGGGGAGGGGTGCATTTTAATGTTTTATTGCTAAATGGTCTATAATGTCTTCTGTTGATTGTTTATTCTTGTTCTTCAAAAAACTGCTAGCTGATGTAAATGTAAAACAAATATGTGCCATGAAATTATAGATTCTCAAGCTTTTTATTGGGTTATGATGTATGTATTATCTTTTCAAGCAGTTGCAAGATAACATTGATCTTTTCTGCCGGACGAGGAATAATATTATTGCTATCCTAAATGAGTACGTAGATATTCATTTTATTTACTTGAAAGTAATTCCTTACAGATCCATCACCTATTAATGGAGATCTTGAATTCTAACTTTTGCAGCATGAGGGAAACTCCAGGCATAATGAGCAAAATGCTACCACTTCCTGTATCTATAAATGAAGATCTTGCAAATAGAATCTTACCTAGCACAACCTGGTAAGATCTCTAACAAATATGTTGGCCAGATGGGTGCAAGGGACACAGAAAGTTTCTGACTTTTGGATTGTATTTTTGAGAACCGATTAAAATCACTCTAAAATATGTTTTTAATCATTCAAAACCAATTTTGATGACTTTAAAATTGCATTTTGTGTGATTAAAGGCGTGTTTTGGAGTGATTTTGAAAATGAAAAAAGTGTTTTTAACAATTTCAAAATCACTCCCAAACATCCTTAATCTACATCTTTTGAGTCTGAAGTTGTTTTAGTTTAGGATTCGGAACGTAGATGTCTATGTAACACTTCTATTTACCTGTTTAAGATAAAAGATAACCCTTAGTCAAAGTAAATGAAGTTAGGAGGAGAGAGAAGTTTTGGCCCAAAAAAATGGATCAGAGTGATTTCTGATGTATTCTTCTGTTTTTGAATTGGTTGGTCAGATTTGGATTGGCTCCATTCTTTTGGCCCATGGTTGTGTTTTATGCCTACACCAGGGCCACTACAAAGAAATACAAACAAGAAGATAACGATGATGACGATGACGACAATGATGATGTACGGCTGATTGGTCGGTTAGCCCCTGCTGCCCCCCGGCTGCCCAATCAGACAAAATTATGATGGCTGAGAAAAAAAGAGTGTTTGATCTTGATGTCATGTCTGTGAGCTCCCCCAGCACACACAAACTATTAACAGGGAAGTTAAGTGTCAGCTGCAGATATGTTGGTTGGGAGATTTGAGTCAAAAGGGAGAAGAAGAGAGAGAGAGGGGAAAATATTGAATCTGCTGCTTCCAATTTGTACTATTTTAGGCCTTACCTAAAAAAATAAAAATTGTTGTGCAAAAGTATTTGATATCAAAGTATAGTTGGATTGGAGGAGCTGAAATCATTCTGTTACCATTAATTGCATTTCTGTAGTTATCTGTTTGTTGGAGGCTAATTTGGTCAATTGGGTGACATGACAATGGAAAAGTAGACCTAATTATTCAAAGTATTCTCTCTCTCTCTCTCTCAATCATCCCCATACATTTTATACATACAAGTCTTCTAATATTTCCTGACTTGACTTTATGAAACTTTTAGAGTTGCGTATTTGTAATGTTCTTGAACTTTTAAAGTTGTG ATGGCAGCAGAATCCAACACGGGGTTTCACCGGGACGAAACGTTAAGTTCCGCTTTGAATCGGCACGCTATATCTTTTCAGTCTACTGCAACAACTAGCAGCTCAGAGATGATGACAATGGGGAACTATTTTGGGGTCAACAACGCGTCGGCCATAATGTTTTCGGGGAATTCAAGCGTCGTCAACAATAACAACAACCATCCTGTTATCAGCCAAGCTACCAATTCATCTGGTTCTCTGCTTCTTGACACGGTGCCAGGGCTCAAGCATGATGCTGGGTTGGCAGTCGAATGGTCCGTGGAAGAGCAATTCAAATTGGAGGAAGGTCTTGTCATGTTTGCTGATGAACCAAGCATTTTGAGGTATATCAAGATTGCTGCCACGTTACGTGATAAAACAGTCCGGGATGTTGCCTTAAGGTGTAGGTGGATGACTAGAAAACGAAGAAAGCCCGAAGAACCTATTGGAAAGAAAGTGAACAATCGAAAGGATAAACTGGTGGAGCCATCTTTAAAAATAAACACACCTTCAGCCCCTGGACCCAGCATGGCTGCATATTCTCATATGATGCATCATATGAACAGAAAAGAACGTACGCCTTCTGAAGAGATTAGCAGTGCAGCAGCGCATCTTCTGGAACAGAATGCTCAAGCTTTTAGTCAAATTACTTCCAACCTTTCCATGTACAAGTTGCAAGATAACATTGATCTTTTCTGCCGGACGAGGAATAATATTATTGCTATCCTAAATGACATGAGGGAAACTCCAGGCATAATGAGCAAAATGCTACCACTTCCTGTATCTATAAATGAAGATCTTGCAAATAGAATCTTACCTAGCACAACCTGGCGTGTTTTGGAATTTGGATTGGCTCCATTCTTTTGGCCCATGGTTGTGTTTTATGCCTACACCAGGGCCACTACAAAGAAATACAAACAAGAAGATAACGATGATGACGATGACGACAATGATGATGTACGGCTGATTGGTCGGTTAGCCCCTGCTGCCCCCCGGCTGCCCAATCAGACAAAATTATGATGGCTGAGAAAAAAAGAGTGTTTGATCTTGATGTCATGTCTGTGAGCTCCCCCAGCACACACAAACTATTAACAGGGAAGTTAAGTGTCAGCTGCAGATATGTTGGTTGGGAGATTTGAGTCAAAAGGGAGAAGAAGAGAGAGAGAGGGGAAAATATTGAATCTGCTGCTTCCAATTTGTACTATTTTAGGCCTTACCTAAAAAAATAAAAATTGTTGTGCAAAAGTATTTGATATCAAAGTATAGTTGGATTGGAGGAGCTGAAATCATTCTGTTACCATTAATTGCATTTCTGTAGTTATCTGTTTGTTGGAGGCTAATTTGGTCAATTGGGTGACATGACAATGGAAAAGTAGACCTAATTATTCAAAGTATTCTCTCTCTCTCTCTCTCAATCATCCCCATACATTTTATACATACAAGTCTTCTAATATTTCCTGACTTGACTTTATGAAACTTTTAGAGTTGCGTATTTGTAATGTTCTTGAACTTTTAAAGTTGTG ATGGCAGCAGAATCCAACACGGGGTTTCACCGGGACGAAACGTTAAGTTCCGCTTTGAATCGGCACGCTATATCTTTTCAGTCTACTGCAACAACTAGCAGCTCAGAGATGATGACAATGGGGAACTATTTTGGGGTCAACAACGCGTCGGCCATAATGTTTTCGGGGAATTCAAGCGTCGTCAACAATAACAACAACCATCCTGTTATCAGCCAAGCTACCAATTCATCTGGTTCTCTGCTTCTTGACACGGTGCCAGGGCTCAAGCATGATGCTGGGTTGGCAGTCGAATGGTCCGTGGAAGAGCAATTCAAATTGGAGGAAGGTCTTGTCATGTTTGCTGATGAACCAAGCATTTTGAGGTATATCAAGATTGCTGCCACGTTACGTGATAAAACAGTCCGGGATGTTGCCTTAAGGTGTAGGTGGATGACTAGAAAACGAAGAAAGCCCGAAGAACCTATTGGAAAGAAAGTGAACAATCGAAAGGATAAACTGGTGGAGCCATCTTTAAAAATAAACACACCTTCAGCCCCTGGACCCAGCATGGCTGCATATTCTCATATGATGCATCATATGAACAGAAAAGAACGTACGCCTTCTGAAGAGATTAGCAGTGCAGCAGCGCATCTTCTGGAACAGAATGCTCAAGCTTTTAGTCAAATTACTTCCAACCTTTCCATGTACAAGTTGCAAGATAACATTGATCTTTTCTGCCGGACGAGGAATAATATTATTGCTATCCTAAATGACATGAGGGAAACTCCAGGCATAATGAGCAAAATGCTACCACTTCCTGTATCTATAAATGAAGATCTTGCAAATAGAATCTTACCTAGCACAACCTGGCGTGTTTTGGAATTTGGATTGGCTCCATTCTTTTGGCCCATGGTTGTGTTTTATGCCTACACCAGGGCCACTACAAAGAAATACAAACAAGAAGATAACGATGATGACGATGACGACAATGATGATGTACGGCTGATTGGTCGGTTAGCCCCTGCTGCCCCCCGGCTGCCCAATCAGACAAAATTATGA MAAESNTGFHRDETLSSALNRHAISFQSTATTSSSEMMTMGNYFGVNNASAIMFSGNSSVVNNNNNHPVISQATNSSGSLLLDTVPGLKHDAGLAVEWSVEEQFKLEEGLVMFADEPSILRYIKIAATLRDKTVRDVALRCRWMTRKRRKPEEPIGKKVNNRKDKLVEPSLKINTPSAPGPSMAAYSHMMHHMNRKERTPSEEISSAAAHLLEQNAQAFSQITSNLSMYKLQDNIDLFCRTRNNIIAILNDMRETPGIMSKMLPLPVSINEDLANRILPSTTWRVLEFGLAPFFWPMVVFYAYTRATTKKYKQEDNDDDDDDNDDVRLIGRLAPAAPRLPNQTKL Homology
BLAST of Clc01G07460 vs. NCBI nr
Match: XP_038875605.1 (uncharacterized protein LOC120068015 isoform X2 [Benincasa hispida]) HSP 1 Score: 527.3 bits (1357), Expect = 9.8e-146 Identity = 275/282 (97.52%), Postives = 278/282 (98.58%), Query Frame = 0
BLAST of Clc01G07460 vs. NCBI nr
Match: XP_031741920.1 (uncharacterized protein LOC101213463 isoform X2 [Cucumis sativus] >KAE8648302.1 hypothetical protein Csa_017833 [Cucumis sativus]) HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-144 Identity = 273/282 (96.81%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Clc01G07460 vs. NCBI nr
Match: XP_038875604.1 (uncharacterized protein LOC120068015 isoform X1 [Benincasa hispida]) HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-144 Identity = 275/284 (96.83%), Postives = 278/284 (97.89%), Query Frame = 0
BLAST of Clc01G07460 vs. NCBI nr
Match: XP_008466582.1 (PREDICTED: uncharacterized protein LOC103503945 isoform X3 [Cucumis melo]) HSP 1 Score: 518.1 bits (1333), Expect = 5.9e-143 Identity = 272/284 (95.77%), Postives = 276/284 (97.18%), Query Frame = 0
BLAST of Clc01G07460 vs. NCBI nr
Match: XP_016898846.1 (PREDICTED: uncharacterized protein LOC103503945 isoform X2 [Cucumis melo] >TYJ97197.1 uncharacterized protein E5676_scaffold174G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 517.7 bits (1332), Expect = 7.7e-143 Identity = 272/285 (95.44%), Postives = 276/285 (96.84%), Query Frame = 0
BLAST of Clc01G07460 vs. ExPASy TrEMBL
Match: A0A1S3CSX1 (uncharacterized protein LOC103503945 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503945 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 2.9e-143 Identity = 272/284 (95.77%), Postives = 276/284 (97.18%), Query Frame = 0
BLAST of Clc01G07460 vs. ExPASy TrEMBL
Match: A0A5D3BDJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00800 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.7e-143 Identity = 272/285 (95.44%), Postives = 276/285 (96.84%), Query Frame = 0
BLAST of Clc01G07460 vs. ExPASy TrEMBL
Match: A0A1S4DS82 (uncharacterized protein LOC103503945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503945 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.7e-143 Identity = 272/285 (95.44%), Postives = 276/285 (96.84%), Query Frame = 0
BLAST of Clc01G07460 vs. ExPASy TrEMBL
Match: A0A1S4DT12 (uncharacterized protein LOC103503945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503945 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 9.2e-142 Identity = 272/286 (95.10%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Clc01G07460 vs. ExPASy TrEMBL
Match: A0A5A7VIK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00190 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 9.2e-142 Identity = 272/286 (95.10%), Postives = 276/286 (96.50%), Query Frame = 0
BLAST of Clc01G07460 vs. TAIR 10
Match: AT1G60670.2 (Protein of unknown function (DUF3755) ) HSP 1 Score: 203.8 bits (517), Expect = 2.3e-52 Identity = 125/248 (50.40%), Postives = 164/248 (66.13%), Query Frame = 0
BLAST of Clc01G07460 vs. TAIR 10
Match: AT1G68160.1 (Protein of unknown function (DUF3755) ) HSP 1 Score: 196.4 bits (498), Expect = 3.7e-50 Identity = 125/275 (45.45%), Postives = 174/275 (63.27%), Query Frame = 0
BLAST of Clc01G07460 vs. TAIR 10
Match: AT1G10820.1 (Protein of unknown function (DUF3755) ) HSP 1 Score: 195.7 bits (496), Expect = 6.3e-50 Identity = 116/208 (55.77%), Postives = 144/208 (69.23%), Query Frame = 0
BLAST of Clc01G07460 vs. TAIR 10
Match: AT1G10820.2 (Protein of unknown function (DUF3755) ) HSP 1 Score: 193.0 bits (489), Expect = 4.1e-49 Identity = 123/246 (50.00%), Postives = 158/246 (64.23%), Query Frame = 0
BLAST of Clc01G07460 vs. TAIR 10
Match: AT3G07565.1 (Protein of unknown function (DUF3755) ) HSP 1 Score: 169.9 bits (429), Expect = 3.7e-42 Identity = 92/234 (39.32%), Postives = 151/234 (64.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|