Cla97C10G188900 (gene) Watermelon (97103) v2.5

Overview
NameCla97C10G188900
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptionnuclear transcription factor Y subunit B-9-like
LocationCla97Chr10: 4992449 .. 4995382 (+)
RNA-Seq ExpressionCla97C10G188900
SyntenyCla97C10G188900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGGGCAATTATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGGTATTTTTCACTCTATATTCCCCTTTTTACTCCTCTTCTCTTTTTCTTTTGCATGCAAATATTCTATATTTATAAATGCCTCTTTTGTTTTATTTTTTTGTTGCATGTATCAAAACATATATAGATCTCTTCACTTGGATCATCATTAGTGTAAATCTTGAGAATTTTAAAGGGTTTTTTTATCCATTAAAATGGTTTATTTTTTCTTTATGTATTTTGTTAATTTTGGTATTTTTTGGTGTTTTAGATGTGTATGTGTGCATGTATAAGTAAAAGCTTGAGTATTTGGTTGAGAGACAGAGAGAGAGAGAGAGAGAGTATGAAAATGGGATTCTATTCTTCTTCTCTCTCTCATTAGGCCATACCCATAGTTTTAGTTCTAAGAGGTTTTTGTTTGTTGATTATAGAGAGAGAGAGGAGAACGGGGTTGGTGGGTTTTGTGGAAGAGAGAGAGGAAGATGAAGGGTTACTTGTGTTTTTCTCCTTAAGGGTGTGGTAGTGGGATGAAACTATCACAATAGATGAAATTGCATAGAAAAAATATTAAAAGAGGCCATTACAATGGATGTGATCGACAATTATCTCAATTTATACATAATAACTTTGTTCAATGCATGTGTGGAGTGTGAAGCTAGAATTTGTCATAGATCTATAGAGATTTTAGCTTTTTTTTTTTTTTTTCTAAAGGTCTTGTTTGATGAGGATTTGCTTTTGAAAATTCCTTAAATCATGAAACTATCTTTCAGAATTTTGAAAACCATTCATAAACTAAAGTCATTTGTATAAATATTTGTATTCTTAGTCAAATTTGAATTTAATTTTAGTTTTTGCATTTGTAGGGGTGATAGTTTTATTATTTTATTATTATTATTATTATTATTATTATTTATTATTATTTTTTTTAAGATGAGTGAGTTGGCAGTGTTGGTGACGTGGCTAATCCAATAGTAAAAGGAAAAAAAAAAAACAAAAAAAAAAGGTGTCGTATTGTATTGCATATGACATGTTGTCTTTGTGCCAATACAAACAGTCCAAAACCTCTTGCCCTAATTCAGCCTTTTTGATTCTCCAGAACCGAACTAACTACCTGCTTTTGTTCCCTTTCCTCACTCGCCCTATGCGGCGCGTGTGCGCGTCACTCACTTTATCATCGTCATCTTCTCTAAATCCCGCCCACCAACTAGCCACCTTTCCTATCCGCTGTCTGTTTTTAGCCTCTTCCCTATTTTTTTTTTTAAATTTATTTTCCCCCATTAATATATATATTTTCATTTGGTCCCTATTATATTCTTTACTTTGTATTTTATATTGTGTGTTAAAGTTTATAAATTAATCCAAAAGAATTAAATTAATTTTAAAAATTCATATCATAATCATTTAAATTAAATAATTGAAAGTTGATGCCAAATATCAAAGGCTTTAGTACAAAAATTAAGGACCAAATAAAAACTAAAATCTAAAATCAAAATTTAAGGGTAATTGAAATATAATGTTTTGAAATTTAGGGACCAAATAGAATTAGATTATGAAAAACTTAGGAATTAAGATACTTTTTTTAGTTTTATTTAAAGTTTTTTTTTAAAAAAAAGAATTATTTTTTACAATTACAGGCCCTGTGATTTAAATTTTTTTTAACTTAACCATTCCTTATACGTTGAAGTATTTTTTTCATTTCCAATAACAAAAAAACATTTTTCTAATCCTACTTTTATGTCTTATTGTTAAGAAATTAATTCATAATAAGTTCCCATGGTACTGAGAGAGTTGAATAAAAATTTATTAGAAAAATAATGCTATTTTAAAGAAGGGAAAATTAAAATGTTGACCAAGTTTTTAGAAATTTGGAGGATGAATTAGAAACTCTCTTCTATCCACTCACAAAGTATCATACTATGTAAATAAATTAATCATCGGTCAATTTTGATATTCAACAATAAAAAGGAATAAATATAAAATGTTAAAACTTAAGAGATTAAATTGAAACATTTTTAAAATATGACTAAATAAATGTTTATTTTATACCAAATATAAAGATCAAGAGATATTAATGTTAGGGATAAATTTTTAAAAATTGCTCTAATTTGTAAACAACTAATTTTAGCCTTAGTTATATTTAAGTTTAAAGGTATATTAATGAATTGAATAAATAAATAAGGATATATATTCGTCTGATGAAACTGAATTTTTAAGCATTTGGTTTATTTAGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

mRNA sequence

GAAGAAGGGCAATTATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

Coding sequence (CDS)

ATGGAATGTGGAGGAACTGCTCAAGGAGGAGGAGATGGCTTCCATAGCTATAAAAGGCAACACCCTAAACCAACTTCTGCACTGAATATGTTGCTGACCCCAAACAAGCCAACCTCCGCCAACAACACTCCGAACAGCAACCACCACCTCTCCAACGGTGGAGCCGCCACTGGCAACTCCCCAGCAACCAGCCCCGTCCCAGTGGCGACTGCAAACAATGAGCAAAGCCAACAATGTGTGGTGCGAGAGCAAGACCAATACATGCCGATTGCTAATGTGATACGCATCATGCGGCGGATCTTGCCCTCCCATGCAAAGATATCAGACGACGCCAAAGAGACTATCCAAGAATGTGTGTCGGAGTACATCAGCTTCATAACTGGCGAGGCGAACGAGCGTTGCCAACGAGAGCAGCGCAAGACGGTAACAGCAGAGGATGTCCTTTGGGCTATGGGGAAGCTAGGTTTTGACGACTACATCGAACCGCTAACTGTTTTCCTCAACCGCTATCGTGAGTCGGAGAGTGACCGAATTCGCACTGAGCCGATTTTGAGGCGCAATGTGGATTACGGGCCACAAGTGGGGATGATGCCACCGTACGGGCAGGCATTTCAAATAGGGCACGTCCCAGCGGGGATGTTCGATGCAATGGGCGGATACTATGGCGGAGGCGGGAGCGGGGGGCCGAGCGCGGGGAATGGTAGCCAGCTTTGA

Protein sequence

MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL
Homology
BLAST of Cla97C10G188900 vs. NCBI nr
Match: XP_038905819.1 (nuclear transcription factor Y subunit B-9-like [Benincasa hispida])

HSP 1 Score: 461.8 bits (1187), Expect = 3.5e-126
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 0

Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGGTAQGGGDGFHSYKRQHPK TSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS
Sbjct: 1   MECGGTAQGGGDGFHSYKRQHPKQTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60

Query: 61  PATSPVPVATA-NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV 120
           PATSP+PVATA NNEQ+QQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV
Sbjct: 61  PATSPIPVATATNNEQNQQCMVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECV 120

Query: 121 SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR 180
           SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR
Sbjct: 121 SEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIR 180

Query: 181 TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYY GGGSGGPSAGNGSQL
Sbjct: 181 TEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYNGGGSGGPSAGNGSQL 238

BLAST of Cla97C10G188900 vs. NCBI nr
Match: KAE8650106.1 (hypothetical protein Csa_009480 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-120
Identity = 224/240 (93.33%), Postives = 229/240 (95.42%), Query Frame = 0

Query: 1   MECGGTAQ-GGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGN 60
           MECGGTAQ GGGDGFHSYKRQHPKPTS LNM+LTPNKPTS NNTPN+NHHLSNGG ATGN
Sbjct: 1   MECGGTAQGGGGDGFHSYKRQHPKPTSGLNMMLTPNKPTSINNTPNTNHHLSNGGTATGN 60

Query: 61  SPATSPVPVATA--NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE 120
           S ATSP+ VA    NNEQ+QQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE
Sbjct: 61  SSATSPLSVAATANNNEQNQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQE 120

Query: 121 CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 180
           CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR
Sbjct: 121 CVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 180

Query: 181 IRTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           IRTEPILRRNVDYGPQVGM+ PYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL
Sbjct: 181 IRTEPILRRNVDYGPQVGMISPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 240

BLAST of Cla97C10G188900 vs. NCBI nr
Match: XP_023540511.1 (nuclear transcription factor Y subunit B-9-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 5.2e-106
Identity = 200/239 (83.68%), Postives = 213/239 (89.12%), Query Frame = 0

Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG+A GGGDGFHSY RQ PKPTSALN+LLT NK +SANNT N+NH   NG     NS
Sbjct: 1   MECGGSATGGGDGFHSYIRQQPKPTSALNVLLTANKSSSANNTHNTNHQQVNGRNLATNS 60

Query: 61  PAT--SPVPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANV RIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSTPASIAATNNEQSQQCIVREQDQYMPIANVRRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVT EDVLWA+GKLGFDDYIEPLTVFLNRYRESESDRI
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTVEDVLWAIGKLGFDDYIEPLTVFLNRYRESESDRI 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+PPYGQ FQIGHVP+GMFDAMGGYY GGG+GG S+GNG+QL
Sbjct: 181 RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPSGMFDAMGGYYDGGGNGGASSGNGNQL 239

BLAST of Cla97C10G188900 vs. NCBI nr
Match: XP_022944445.1 (nuclear transcription factor Y subunit B-9-like [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 8.9e-106
Identity = 202/239 (84.52%), Postives = 212/239 (88.70%), Query Frame = 0

Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG A GG DGFHSY+RQ PKPTSALN+LLT NK +SANNT NSNH  SN      NS
Sbjct: 1   MECGGAA-GGRDGFHSYRRQQPKPTSALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANS 60

Query: 61  PATSPVP--VATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSIPASIAATNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR+
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+ PYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVTPYGQTFQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

BLAST of Cla97C10G188900 vs. NCBI nr
Match: XP_031738736.1 (nuclear transcription factor Y subunit B-9-like [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 196/210 (93.33%), Postives = 201/210 (95.71%), Query Frame = 0

Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M+LTPNKPTS NNTPN+NHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMLTPNKPTSINNTPNTNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 210

BLAST of Cla97C10G188900 vs. ExPASy Swiss-Prot
Match: Q9SFD8 (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NFYB9 PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-47
Identity = 122/218 (55.96%), Postives = 140/218 (64.22%), Query Frame = 0

Query: 37  PTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA---NN----EQSQQCVVREQDQYMP 96
           P S    P S   L+    +   +P TS V VA A   NN    +Q   CV REQDQYMP
Sbjct: 6   PFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 65

Query: 97  IANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLW 156
           IANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LW
Sbjct: 66  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 125

Query: 157 AMGKLGFDDYIEPLTVFLNRYRESESDR---IRTEPILRRNV-------DYGPQVGMMPP 216
           AM KLGFD+Y++PLTVF+NRYRE E+DR   +R EP   R          +GP  G+ PP
Sbjct: 126 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 185

Query: 217 YGQAFQIGHVPAGMFDAMGGYYGGGGSG--GPSAGNGS 236
               +  G +   M    G YY  G SG    S G GS
Sbjct: 186 --GPYGYGMLDQSMVMGGGRYYQNGSSGQDESSVGGGS 221

BLAST of Cla97C10G188900 vs. ExPASy Swiss-Prot
Match: Q84W66 (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45
Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 0

Query: 13  GFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATAN 72
           GFH Y++     T       TP+ P  A     +N  ++ G       P     P  T+N
Sbjct: 5   GFHGYRKLSVNNT-------TPSPPGLA-----ANFLMAEGSM----RPPEFNQPNKTSN 64

Query: 73  NEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANE 132
             + ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANE
Sbjct: 65  GGE-EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANE 124

Query: 133 RCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           RCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 125 RCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

BLAST of Cla97C10G188900 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 81/158 (51.27%), Postives = 108/158 (68.35%), Query Frame = 0

Query: 72  NNEQSQQCV-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 131
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 132 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDY 191
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R      L R    
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG----LGR---- 134

Query: 192 GPQVGMMPPYGQAFQIGHVPAGMFDAM---GGYYGGGG 226
            PQ G           G V     DA+   GG+YGGGG
Sbjct: 135 -PQTG-----------GEVGEHQRDAVGDGGGFYGGGG 152

BLAST of Cla97C10G188900 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 61/96 (63.54%), Postives = 83/96 (86.46%), Query Frame = 0

Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+++PIAN+ RIM++ +P++ KI+ DAKET+QECVSE+ISFIT EA+++CQRE+RK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           T+  +D+LWAM  LGF+DYIEPL V+L +YRE E D
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 131

BLAST of Cla97C10G188900 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-33
Identity = 61/96 (63.54%), Postives = 83/96 (86.46%), Query Frame = 0

Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+++PIAN+ RIM++ +P++ KI+ DAKET+QECVSE+ISFIT EA+++CQRE+RK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           T+  +D+LWAM  LGF+DYIEPL V+L +YRE E D
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD 124

BLAST of Cla97C10G188900 vs. ExPASy TrEMBL
Match: A0A6J1FYN7 (nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN=LOC111448893 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.3e-106
Identity = 202/239 (84.52%), Postives = 212/239 (88.70%), Query Frame = 0

Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG A GG DGFHSY+RQ PKPTSALN+LLT NK +SANNT NSNH  SN      NS
Sbjct: 1   MECGGAA-GGRDGFHSYRRQQPKPTSALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANS 60

Query: 61  PATSPVP--VATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
           P T  +P  +A  NNEQSQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  PVTGSIPASIAATNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR+
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+ PYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVTPYGQTFQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

BLAST of Cla97C10G188900 vs. ExPASy TrEMBL
Match: A0A1S3BKV5 (nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC103491142 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 194/210 (92.38%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS NNTPNSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINNTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

BLAST of Cla97C10G188900 vs. ExPASy TrEMBL
Match: A0A5D3CPF3 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00390 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 193/210 (91.90%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS N+TPNSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINSTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

BLAST of Cla97C10G188900 vs. ExPASy TrEMBL
Match: A0A6J1KTC3 (nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 198/239 (82.85%), Postives = 207/239 (86.61%), Query Frame = 0

Query: 1   MECGGTAQGGGDGFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNS 60
           MECGG+A GGGDGFHSYKRQ PKPTSALN+LLT NK + ANN    NH  SNG     NS
Sbjct: 1   MECGGSA-GGGDGFHSYKRQQPKPTSALNVLLTTNKSSFANN----NHQQSNGRNIAANS 60

Query: 61  PATSP--VPVATANNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120
             T      +A  NN +SQQC+VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC
Sbjct: 61  LMTGSTCASIAATNNGKSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQEC 120

Query: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRI 180
           VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE ESDRI
Sbjct: 121 VSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRELESDRI 180

Query: 181 RTEPILRRNVDYGPQVGMMPPYGQAFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           RTEPILRRNVDYGPQVGM+PPYGQ FQIGHVP GMFDAMGGYY GGG+GG S+GNGSQL
Sbjct: 181 RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 234

BLAST of Cla97C10G188900 vs. ExPASy TrEMBL
Match: A0A5A7VC19 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00440 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.1e-100
Identity = 192/210 (91.43%), Postives = 198/210 (94.29%), Query Frame = 0

Query: 30  MLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA--NNEQSQQCVVREQDQY 89
           M++TPNK TS N+T NSNHHLSNGG ATGNS ATSP+ VA    NNEQ+QQCVVREQDQY
Sbjct: 1   MMVTPNKATSINSTLNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQY 60

Query: 90  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 149
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 61  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 120

Query: 150 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMMPPYGQAFQIG 209
           LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGM+ PYGQAFQIG
Sbjct: 121 LWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIG 180

Query: 210 HVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 238
           HVPAGMFDAMGGYYGGGG GGPSAGNGSQL
Sbjct: 181 HVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

BLAST of Cla97C10G188900 vs. TAIR 10
Match: AT1G21970.1 (Histone superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48
Identity = 122/218 (55.96%), Postives = 140/218 (64.22%), Query Frame = 0

Query: 37  PTSANNTPNSNHHLSNGGAATGNSPATSPVPVATA---NN----EQSQQCVVREQDQYMP 96
           P S    P S   L+    +   +P TS V VA A   NN    +Q   CV REQDQYMP
Sbjct: 6   PFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 65

Query: 97  IANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLW 156
           IANVIRIMR+ LPSHAKISDDAKETIQECVSEYISF+TGEANERCQREQRKT+TAED+LW
Sbjct: 66  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 125

Query: 157 AMGKLGFDDYIEPLTVFLNRYRESESDR---IRTEPILRRNV-------DYGPQVGMMPP 216
           AM KLGFD+Y++PLTVF+NRYRE E+DR   +R EP   R          +GP  G+ PP
Sbjct: 126 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 185

Query: 217 YGQAFQIGHVPAGMFDAMGGYYGGGGSG--GPSAGNGS 236
               +  G +   M    G YY  G SG    S G GS
Sbjct: 186 --GPYGYGMLDQSMVMGGGRYYQNGSSGQDESSVGGGS 221

BLAST of Cla97C10G188900 vs. TAIR 10
Match: AT5G47670.2 (nuclear factor Y, subunit B6 )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 72  NNEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEAN 131
           +N   ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEAN
Sbjct: 18  SNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEAN 77

Query: 132 ERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           ERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 78  ERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 123

BLAST of Cla97C10G188900 vs. TAIR 10
Match: AT5G47670.1 (nuclear factor Y, subunit B6 )

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 0

Query: 13  GFHSYKRQHPKPTSALNMLLTPNKPTSANNTPNSNHHLSNGGAATGNSPATSPVPVATAN 72
           GFH Y++     T       TP+ P  A     +N  ++ G       P     P  T+N
Sbjct: 5   GFHGYRKLSVNNT-------TPSPPGLA-----ANFLMAEGSM----RPPEFNQPNKTSN 64

Query: 73  NEQSQQCVVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANE 132
             + ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEANE
Sbjct: 65  GGE-EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANE 124

Query: 133 RCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 178
           RCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 125 RCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

BLAST of Cla97C10G188900 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 81/158 (51.27%), Postives = 108/158 (68.35%), Query Frame = 0

Query: 72  NNEQSQQCV-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 131
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 132 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDY 191
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R      L R    
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTG----LGR---- 134

Query: 192 GPQVGMMPPYGQAFQIGHVPAGMFDAM---GGYYGGGG 226
            PQ G           G V     DA+   GG+YGGGG
Sbjct: 135 -PQTG-----------GEVGEHQRDAVGDGGGFYGGGG 152

BLAST of Cla97C10G188900 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 61/96 (63.54%), Postives = 81/96 (84.38%), Query Frame = 0

Query: 81  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 140
           VREQD+Y+PIAN+ RIM++ LP + KI  DAK+T+QECVSE+ISFIT EA+++CQ+E+RK
Sbjct: 19  VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRK 78

Query: 141 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESD 177
           TV  +D+LWAM  LGF+DY+EPL ++L RYRE E D
Sbjct: 79  TVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905819.13.5e-12697.48nuclear transcription factor Y subunit B-9-like [Benincasa hispida][more]
KAE8650106.14.8e-12093.33hypothetical protein Csa_009480 [Cucumis sativus][more]
XP_023540511.15.2e-10683.68nuclear transcription factor Y subunit B-9-like isoform X2 [Cucurbita pepo subsp... [more]
XP_022944445.18.9e-10684.52nuclear transcription factor Y subunit B-9-like [Cucurbita moschata][more]
XP_031738736.13.1e-10393.33nuclear transcription factor Y subunit B-9-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q9SFD81.5e-4755.96Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q84W661.8e-4561.21Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q9FGJ32.7e-3351.27Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF... [more]
Q60EQ47.9e-3363.54Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39... [more]
P252097.9e-3363.54Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FYN74.3e-10684.52nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3BKV53.8e-10292.38nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC1034911... [more]
A0A5D3CPF31.4e-10191.90Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1KTC32.4e-10182.85nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima O... [more]
A0A5A7VC192.1e-10091.43Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469... [more]
Match NameE-valueIdentityDescription
AT1G21970.11.1e-4855.96Histone superfamily protein [more]
AT5G47670.24.5e-4782.08nuclear factor Y, subunit B6 [more]
AT5G47670.11.3e-4661.21nuclear factor Y, subunit B6 [more]
AT5G47640.11.9e-3451.27nuclear factor Y, subunit B2 [more]
AT2G38880.22.1e-3363.54nuclear factor Y, subunit B1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 134..152
score: 32.06
coord: 115..133
score: 43.9
coord: 153..171
score: 31.46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..77
NoneNo IPR availablePANTHERPTHR11064:SF115NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9coord: 58..203
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 74..188
e-value: 1.1E-40
score: 140.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 84..177
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 88..151
e-value: 3.0E-25
score: 88.3
IPR027113Transcription factor NFYB/HAP3PANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 58..203
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 118..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G188900.2Cla97C10G188900.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding