Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA
mRNA sequence
ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA
Coding sequence (CDS)
ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA
Protein sequence
MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGKEKEVVEENGLPLDLNIAVAVPVIDI
Homology
BLAST of Cla97C06G124380 vs. NCBI nr
Match:
KAE8652459.1 (hypothetical protein Csa_013196 [Cucumis sativus])
HSP 1 Score: 154.1 bits (388), Expect = 8.3e-34
Identity = 90/130 (69.23%), Postives = 100/130 (76.92%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEK 60
MG+EKRK + EN I+EKK K D+T AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+
Sbjct: 1 MGKEKRKRQMENRAEIHEKKTKNDDTPTPAAEEPTDEEVEEFYMILRRMKQMAEYFGVER 60
Query: 61 GMLAKSLSVVVAGAADRGEK----EEEEKGPDTVAPAPAEVKPRGKEKEVVEENGLPLDL 120
GMLAKSLS VVA AAD+ EK EEE+KG AP+PAEV RGK KEVVEENGL LDL
Sbjct: 61 GMLAKSLSAVVAAAADQQEKKEEEEEEKKGLSMAAPSPAEVSRRGKGKEVVEENGLRLDL 120
Query: 121 NIAVAVPVID 127
NIA+AV D
Sbjct: 121 NIALAVQQSD 130
BLAST of Cla97C06G124380 vs. NCBI nr
Match:
KAA0058070.1 (hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa])
HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
MG+EKRK + E+ I+EKK + D+ TA+ AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1 MGKEKRKRQLESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60
Query: 61 KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
+GML KSLS VVA AA++ EK+EEEKG T APAPAE RGK +KEVVEENGL LDLN
Sbjct: 61 RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120
Query: 121 IAVAV 123
IAVAV
Sbjct: 121 IAVAV 125
BLAST of Cla97C06G124380 vs. NCBI nr
Match:
TYK28420.1 (hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa])
HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
MG+EKRK + E+ I+EKK + D+ TA+ AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1 MGKEKRKRQLESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60
Query: 61 KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
+GML KSLS VVA AA++ EK+EEEKG T APAPAE RGK +KEVVEENGL LDLN
Sbjct: 61 RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120
Query: 121 IAVAV 123
IAVAV
Sbjct: 121 IAVAV 125
BLAST of Cla97C06G124380 vs. NCBI nr
Match:
KAG6589551.1 (hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 83/124 (66.94%), Postives = 88/124 (70.97%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEK 60
M R KRK + EN G EKK K DET AA +EPTDEEVEEFY ILRRMK+AAEYFGVEK
Sbjct: 1 MVRGKRKCQSENDGKFCEKKTKNDETTAAAEKEPTDEEVEEFYSILRRMKRAAEYFGVEK 60
Query: 61 GMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAP--AEVKPRGKEKEVVEENGLPLDLNI 120
GML KSL V A AADR EKEEE+KG A +K GK KEVV ENGL LDLNI
Sbjct: 61 GMLTKSLRDVAAAAADREEKEEEKKGVKRAEAETDVARMKQGGKGKEVVAENGLRLDLNI 120
Query: 121 AVAV 123
AVAV
Sbjct: 121 AVAV 124
BLAST of Cla97C06G124380 vs. ExPASy TrEMBL
Match:
A0A5D3DYW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00500 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
MG+EKRK + E+ I+EKK + D+ TA+ AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1 MGKEKRKRQLESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60
Query: 61 KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
+GML KSLS VVA AA++ EK+EEEKG T APAPAE RGK +KEVVEENGL LDLN
Sbjct: 61 RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120
Query: 121 IAVAV 123
IAVAV
Sbjct: 121 IAVAV 125
BLAST of Cla97C06G124380 vs. ExPASy TrEMBL
Match:
A0A5A7USD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003770 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0
Query: 1 MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
MG+EKRK + E+ I+EKK + D+ TA+ AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1 MGKEKRKRQLESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60
Query: 61 KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
+GML KSLS VVA AA++ EK+EEEKG T APAPAE RGK +KEVVEENGL LDLN
Sbjct: 61 RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120
Query: 121 IAVAV 123
IAVAV
Sbjct: 121 IAVAV 125
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8652459.1 | 8.3e-34 | 69.23 | hypothetical protein Csa_013196 [Cucumis sativus] | [more] |
| KAA0058070.1 | 3.8e-31 | 70.40 | hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa] | [more] |
| TYK28420.1 | 3.8e-31 | 70.40 | hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa] | [more] |
| KAG6589551.1 | 1.5e-27 | 66.94 | hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DYW7 | 1.9e-31 | 70.40 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7USD1 | 1.9e-31 | 70.40 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
