Cla97C06G120320 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G120320
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr06: 22253825 .. 22254274 (-)
RNA-Seq Expression	Cla97C06G120320
Synteny	Cla97C06G120320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAACAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGTGATTATTTTATCTTATATTTTTAAATTTTAACTTCAATTTTAAGTTAGAAATATATATTTTAACTAATTGAACTATATTCACGTGGACAATAAAAAGGAATAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTAAAATAA

mRNA sequence

ATGGAAGAACAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGAATAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTAAAATAA

Coding sequence (CDS)

ATGGAAGAACAACAATCAAGAGCGGCAAAAGATGGTCATAGCAATCTATATGACTCTCAAGAATTTAAGGCTATGATTGGTCACCTCAACAAAGCCATTCATTCCAATCACAATGTTTTATCTAACCATTTGATCAATTCACCATTTTATCGTCAGCGTTTGAATGAAATTTATAAAGATAGTATTGGCTCGACTAAGAGGATCATGTGGTATCAAACAGGAATAATTGACACGACCAAAAGAACCACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGTTGGGAAGCTATGGAAACAAATTAAGGTAGGGCTAATGGGCATTCTTCCAAAGAAAGATGTAAAATAA

Protein sequence

MEEQQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMWYQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKDVK

Homology

[Close]

BLAST of Cla97C06G120320 vs. NCBI nr
Match: KGN53885.1 (hypothetical protein Csa_011823 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43
Identity = 96/120 (80.00%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 1   MEEQQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKD 60
           MEEQQS A KD HSNLYD QEFKAMIGHLNKA H + +VLSNHLINSPFYRQRLNEIYK+
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 61  SIGSTKRIMWYQT----GIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKDVK 117
           SIGSTK+IMWY+T    G I+T+KR TKQRGMISN SL G+LWKQIKVGLMGILPKKD+K
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKDLK 120

[Close]

BLAST of Cla97C06G120320 vs. NCBI nr
Match: EEF47791.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-05
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHL--INSPFYRQRLNEIYKDSIGSTKRIMWY 73
           S LYDS EF+A+   LNKA+ S ++     +  + SPFY  RL+ IYK++  + KRIM  
Sbjct: 44  STLYDSYEFRAVTEQLNKAMQSLNSSSPTFMSYLKSPFYSHRLDSIYKENSETQKRIMCS 103

Query: 74  QTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 108
           +     + K+ +++   + +     +LWK+IK GL+
Sbjct: 104 RINQRYSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

[Close]

BLAST of Cla97C06G120320 vs. NCBI nr
Match: KAF3968219.1 (hypothetical protein CMV_007858 [Castanea mollissima])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSN----HLINSPFYRQRLNEIYKDSIGSTKRIM 73
           S LYDS E +A+   LNKAI ++ NV S     HL NSPFYRQ+L  IYK++  +++R  
Sbjct: 38  STLYDSFELRAITHQLNKAIQAS-NVSSPPYLCHLKNSPFYRQQLGHIYKENAQTSRRAS 97

Query: 74  WYQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 115
                     KR +       +   V +LWK++K GL+    KKD
Sbjct: 98  SSLPAHAVLDKRMSMAETNKGSGGFVTQLWKKVKQGLLRNKQKKD 141

[Close]

BLAST of Cla97C06G120320 vs. NCBI nr
Match: KDP31321.1 (hypothetical protein JCGZ_11697 [Jatropha curcas])

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-05
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHS---NHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMW 73
           S LYDS E +A+   LNKAI S   +   L ++L  SPFY QRL+ IYK++  + K+IM 
Sbjct: 44  STLYDSFELRAVTNQLNKAIQSLNCSSPTLMSYL-KSPFYGQRLDSIYKENAKTPKKIMG 103

Query: 74  YQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 115
            Q       KR ++  G      L+ +LWK++K GL+    + D
Sbjct: 104 SQLARRSIDKRASRTAG----GGLMSRLWKKVKQGLLWSKQRND 142

[Close]

BLAST of Cla97C06G120320 vs. NCBI nr
Match: KAF4392625.1 (hypothetical protein F8388_003045 [Cannabis sativa])

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-05
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLI--NSPFYRQRLNEIYKDSIGSTKRIM-- 73
           S LYDS E  A++  LNKAI  +      ++   NSPFYR+R N+IYK++  S+K++   
Sbjct: 47  STLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNPNSPFYRKRQNQIYKENKESSKKLTLS 106

Query: 74  -WYQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 108
                 I+D +K    +   +    +V +LWK++K GL+
Sbjct: 107 NLSSASILDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

[Close]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL
Match: A0A0A0KW83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 96/120 (80.00%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 1   MEEQQSRAAKDGHSNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLINSPFYRQRLNEIYKD 60
           MEEQQS A KD HSNLYD QEFKAMIGHLNKA H + +VLSNHLINSPFYRQRLNEIYK+
Sbjct: 1   MEEQQSGAPKDCHSNLYDYQEFKAMIGHLNKATHFSPSVLSNHLINSPFYRQRLNEIYKN 60

Query: 61  SIGSTKRIMWYQT----GIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKDVK 117
           SIGSTK+IMWY+T    G I+T+KR TKQRGMISN SL G+LWKQIKVGLMGILPKKD+K
Sbjct: 61  SIGSTKKIMWYETGRQKGNIETSKRRTKQRGMISNASLAGRLWKQIKVGLMGILPKKDLK 120

[Close]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL
Match: B9RLR6 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHL--INSPFYRQRLNEIYKDSIGSTKRIMWY 73
           S LYDS EF+A+   LNKA+ S ++     +  + SPFY  RL+ IYK++  + KRIM  
Sbjct: 44  STLYDSYEFRAVTEQLNKAMQSLNSSSPTFMSYLKSPFYSHRLDSIYKENSETQKRIMCS 103

Query: 74  QTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 108
           +     + K+ +++   + +     +LWK+IK GL+
Sbjct: 104 RINQRYSDKKASRKGSRVMSGGFASRLWKKIKEGLL 139

[Close]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL
Match: A0A067K525 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHS---NHNVLSNHLINSPFYRQRLNEIYKDSIGSTKRIMW 73
           S LYDS E +A+   LNKAI S   +   L ++L  SPFY QRL+ IYK++  + K+IM 
Sbjct: 44  STLYDSFELRAVTNQLNKAIQSLNCSSPTLMSYL-KSPFYGQRLDSIYKENAKTPKKIMG 103

Query: 74  YQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLMGILPKKD 115
            Q       KR ++  G      L+ +LWK++K GL+    + D
Sbjct: 104 SQLARRSIDKRASRTAG----GGLMSRLWKKVKQGLLWSKQRND 142

[Close]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL
Match: A0A7J6HC11 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003045 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLI--NSPFYRQRLNEIYKDSIGSTKRIM-- 73
           S LYDS E  A++  LNKAI  +      ++   NSPFYR+R N+IYK++  S+K++   
Sbjct: 47  STLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNPNSPFYRKRQNQIYKENKESSKKLTLS 106

Query: 74  -WYQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 108
                 I+D +K    +   +    +V +LWK++K GL+
Sbjct: 107 NLSSASILDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

[Close]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL
Match: A0A803P9L1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 14  SNLYDSQEFKAMIGHLNKAIHSNHNVLSNHLI--NSPFYRQRLNEIYKDSIGSTKRIM-- 73
           S LYDS E  A++  LNKAI  +      ++   NSPFYR+R N+IYK++  S+K++   
Sbjct: 47  STLYDSYELHAVVHQLNKAIQGSKAFSPPYIYNPNSPFYRKRQNQIYKENKESSKKLTLS 106

Query: 74  -WYQTGIIDTTKRTTKQRGMISNVSLVGKLWKQIKVGLM 108
                 I+D +K    +   +    +V +LWK++K GL+
Sbjct: 107 NLSSASILDGSKSRYSRGAWVVTREVVTRLWKKVKQGLL 145

The following BLAST results are available for this feature:

BLAST of Cla97C06G120320 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53885.1	2.3e-43	80.00	hypothetical protein Csa_011823 [Cucumis sativus]	[more]
EEF47791.1	2.5e-05	35.42	conserved hypothetical protein [Ricinus communis]	[more]
KAF3968219.1	3.3e-05	39.05	hypothetical protein CMV_007858 [Castanea mollissima]	[more]
KDP31321.1	4.3e-05	38.46	hypothetical protein JCGZ_11697 [Jatropha curcas]	[more]
KAF4392625.1	7.4e-05	35.35	hypothetical protein F8388_003045 [Cannabis sativa]	[more]

BLAST of Cla97C06G120320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW83	1.1e-43	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179690 PE=4 SV=1	[more]
B9RLR6	1.2e-05	35.42	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1470430 PE=4 SV=1	[more]
A0A067K525	2.1e-05	38.46	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11697 PE=4 SV=1	[more]
A0A7J6HC11	3.6e-05	35.35	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003045 PE=4 SV=1	[more]
A0A803P9L1	3.6e-05	35.35	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Cla97C06G120320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G120320.2	Cla97C06G120320.2	mRNA