Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATGATGAAGAGGGTTCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGCACGACGTCGTCGACAAGAAGCATACACGTAAGCTAGCTCAAGGCTTCGGTGGCGGGAGAACCCCCGAAACGCGAGTGTTCTACGTTGAAAATAAGCCTCACCCTGATCATATTGCTGATGTTGCAAATGAGCCTGACCCTGATCATGCTGATGTTGCTAATGACGTTGGAGCTAACAAAAACAACACTGACGACGACGATGAAAATCTTGGTTATAAAAATTACGGCAAGGGTTCCGACACTGAAACTCACCGTTACTTCTCGAGCGATAAGCCATACAGACCCTAG
mRNA sequence
ATGATTATGATGAAGAGGGTTCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGCACGACGTCGTCGACAAGAAGCATACACGTAAGCTAGCTCAAGGCTTCGGTGGCGGGAGAACCCCCGAAACGCGAGTGTTCTACGTTGAAAATAAGCCTCACCCTGATCATATTGCTGATGTTGCAAATGAGCCTGACCCTGATCATGCTGATGTTGCTAATGACGTTGGAGCTAACAAAAACAACACTGACGACGACGATGAAAATCTTGGTTATAAAAATTACGGCAAGGGTTCCGACACTGAAACTCACCGTTACTTCTCGAGCGATAAGCCATACAGACCCTAG
Coding sequence (CDS)
ATGATTATGATGAAGAGGGTTCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGCACGACGTCGTCGACAAGAAGCATACACGTAAGCTAGCTCAAGGCTTCGGTGGCGGGAGAACCCCCGAAACGCGAGTGTTCTACGTTGAAAATAAGCCTCACCCTGATCATATTGCTGATGTTGCAAATGAGCCTGACCCTGATCATGCTGATGTTGCTAATGACGTTGGAGCTAACAAAAACAACACTGACGACGACGATGAAAATCTTGGTTATAAAAATTACGGCAAGGGTTCCGACACTGAAACTCACCGTTACTTCTCGAGCGATAAGCCATACAGACCCTAG
Protein sequence
MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYRP
Homology
BLAST of Cla97C06G113940 vs. NCBI nr
Match:
KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 122.5 bits (306), Expect = 2.5e-24
Identity = 71/117 (60.68%), Postives = 81/117 (69.23%), Query Frame = 0
Query: 3 MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHI 62
MMK+VL+L LLL+M DAAMH VV+KKH RKLA+ GG TPET VF + P+ +
Sbjct: 1 MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDV 60
Query: 63 ADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYRP 120
V ADV ++ N NN DDDDENLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 61 EVVV------VADVVTNID-NNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 110
BLAST of Cla97C06G113940 vs. NCBI nr
Match:
KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 122.5 bits (306), Expect = 2.5e-24
Identity = 71/117 (60.68%), Postives = 81/117 (69.23%), Query Frame = 0
Query: 3 MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHI 62
MMK+VL+L LLL+M DAAMH VV+KKH RKLA+ GG TPET VF + P+ +
Sbjct: 21 MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDV 80
Query: 63 ADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYRP 120
V ADV ++ N NN DDDDENLGYKNYGKGSDTETHRYFSSDKPY P
Sbjct: 81 EVVV------VADVVTNID-NNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP 130
BLAST of Cla97C06G113940 vs. NCBI nr
Match:
TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 77/121 (63.64%), Postives = 86/121 (71.07%), Query Frame = 0
Query: 3 MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHI 62
MMKRVLLLFA LLLLLMADAAM +VV+KK RKLAQG G R P+ VF
Sbjct: 1 MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVF----------- 60
Query: 63 ADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYR 120
+ ANEP+ DVA +DV AN ++ +DDD NLGYKNYGKGSDTETHRYFSSDKPYR
Sbjct: 61 -NDANEPELKKTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYR 109
BLAST of Cla97C06G113940 vs. NCBI nr
Match:
XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus])
HSP 1 Score: 119.0 bits (297), Expect = 2.8e-23
Identity = 79/123 (64.23%), Postives = 88/123 (71.54%), Query Frame = 0
Query: 1 MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPD 60
MIMMKRVLLLFAALLLLLMADA +V+KK RKLAQGF RTP+ VF
Sbjct: 1 MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVF--------- 60
Query: 61 HIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGYKNYGKGSDTETHRYFSSDKP 120
+ ANE D ++ DVA +DV AN N + +DDD NLGYKNYGKGSDTETHRYFSSDKP
Sbjct: 61 ---NDANESDLENTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKP 108
BLAST of Cla97C06G113940 vs. NCBI nr
Match:
KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 109.4 bits (272), Expect = 2.2e-20
Identity = 71/119 (59.66%), Postives = 77/119 (64.71%), Query Frame = 0
Query: 1 MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPD 60
M MMKR LLLFA LLL+ DA MH V+ KK RKLAQ F G+ P+T VF
Sbjct: 1 MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSF-SGQIPKTGVF--------- 60
Query: 61 HIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYRP 120
V D D A DVG N NN D+DDENLGYKNYGKGSDTETHRYFSS+KPYRP
Sbjct: 61 --GGVKYSEDADVAQA--DVGMN-NNEDEDDENLGYKNYGKGSDTETHRYFSSEKPYRP 104
BLAST of Cla97C06G113940 vs. ExPASy TrEMBL
Match:
A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 6.0e-24
Identity = 77/121 (63.64%), Postives = 86/121 (71.07%), Query Frame = 0
Query: 3 MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHI 62
MMKRVLLLFA LLLLLMADAAM +VV+KK RKLAQG G R P+ VF
Sbjct: 1 MMKRVLLLFAVLLLLLMADAAMSNVVEKKGARKLAQGSGDRRIPKAEVF----------- 60
Query: 63 ADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKNYGKGSDTETHRYFSSDKPYR 120
+ ANEP+ DVA +DV AN ++ +DDD NLGYKNYGKGSDTETHRYFSSDKPYR
Sbjct: 61 -NDANEPELKKTDVAPDDVVANNIDNDDNEDDDVNLGYKNYGKGSDTETHRYFSSDKPYR 109
BLAST of Cla97C06G113940 vs. ExPASy TrEMBL
Match:
A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.3e-23
Identity = 79/123 (64.23%), Postives = 88/123 (71.54%), Query Frame = 0
Query: 1 MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPD 60
MIMMKRVLLLFAALLLLLMADA +V+KK RKLAQGF RTP+ VF
Sbjct: 1 MIMMKRVLLLFAALLLLLMADAV---IVEKKGARKLAQGFSERRTPKAGVF--------- 60
Query: 61 HIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGYKNYGKGSDTETHRYFSSDKP 120
+ ANE D ++ DVA +DV AN N + +DDD NLGYKNYGKGSDTETHRYFSSDKP
Sbjct: 61 ---NDANESDLENTDVAPDDVVANNNVNDDNEDDDANLGYKNYGKGSDTETHRYFSSDKP 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6575119.1 | 2.5e-24 | 60.68 | hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7013689.1 | 2.5e-24 | 60.68 | hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
TYK02960.1 | 1.2e-23 | 63.64 | uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa] | [more] |
XP_004150985.1 | 2.8e-23 | 64.23 | uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical ... | [more] |
KAG6594018.1 | 2.2e-20 | 59.66 | hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BV16 | 6.0e-24 | 63.64 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KGD6 | 1.3e-23 | 64.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |