Cla97C06G111590 (gene) Watermelon (97103) v2.5

InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Position :
0
Zoom :
x 1
ATGGCCAACCTTGCGACCTGCTTAACCTTCTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCTTTCTCTATGGATCCTCAAACATAAATCTCCAAATTACTCTACATTTAAACAACTGCATTCTTTCCCTTCATACATCCACTTTGACCACACGAAGCTCGTTTCTCTAAGGCATAACCATGGGGCTAGGTTTCCAGTGATTTTCACTGTTCTCGACAATGAATCTGCGCTTACAGAGGAGGTCATCATGGAAAGCGATGTTAAGAGCGAAGGCAGCGTTTCAAATCAGGAAGTGAAAAAGCAAGCACGTCCTTGTGAACTCTACGTTTGTAATTTGCCGAGGAGTTGCGACATTGCAGAGCTGGTCGAGATGTTTAAACCTTATGGCACAGTGTTGGCTGCTGAGGTTTCTCGGAATCCAGAGACAGGCATAAGCAAGGGATGTGGATATGTCACAATGGGTTCAATAAACTCCGCTAAAGTTTCAATTGCAGCATTAGATGGTTCTGATGTTGGTGGACGTGAAATGCGCGTTAGATTTGCTGTTGATATGAATCCCAAAAAGAGGAACCTTAATAACTTGCATTCATCACCCAAGAAGAATATAATATATGAAAGTCCTTACAAAGTATATATTGGAAATCTTGCTTGGGATGTCAAACCTGGAGATCTGAGGAACCTTTTTAGCAGATTTGGAACTGTGGTCAGTGCAAAAGTTTTGAATGATCGTAGAGCTGGAAAAAGCCGTGTTTACGGGTTTCTATCATTTTCTTCAGCGGCAGAGCGTGATGCAGCACTTTCTTTGGATGGAACCGAGTTCAACAACAGAAAACTTGTTGTTAGAGAAGGTATGGAAAGGAACGAGTCTTAG100200300400500600700800Expect = 3.5E-19 / Score = 79.7Expect = 1.1E-21 / Score = 88.0Expect = 3.6E-14 / Score = 52.3Expect = 1.2E-16 / Score = 60.3Score = 17.097071Score = 15.238032Expect = 1.6E-22 / Score = 81.9Expect = 1.5E-23 / Score = 85.5Score = Score = Score = Score = Score = Score = SequenceSM00360PF00076PS50102PS50102G3DSA:3.30.70.330G3DSA:3.30.70.330mobidb-litemobidb-litePTHR48025:SF7PTHR48025SSF54928SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 111..184
e-value: 3.5E-19
score: 79.7
coord: 214..286
e-value: 1.1E-21
score: 88.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 215..283
e-value: 1.2E-16
score: 60.3
coord: 112..182
e-value: 3.6E-14
score: 52.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 213..290
score: 17.097071
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 110..188
score: 15.238032
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 194..294
e-value: 1.6E-22
score: 81.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 77..193
e-value: 1.5E-23
score: 85.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR48025:SF7RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 25..293
NoneNo IPR availablePANTHERPTHR48025OS02G0815200 PROTEINcoord: 25..293
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 109..198
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 207..291