Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTTAAGAAGGCATCAGCAGTTTCATGCAATAACATCCTTCAGCTATTGGCCTTCATCTTTCTGTTTTTTCTCCTCATCACAACCACAGGTAACTTTTAAGCTTTTGAAATCAAATTATTTATTTTGTTTATTATTATTTATTATTTGGAGAAATAATTGAGTATTAACTTCTTGTTATTGCATGTTGTTAATTAGGTTCTTCGGCGAGAAAGAGTTTGGTAGAAGGGAGGAGCCGAAATGAGGACGATCCATACGCCAAAAACCATGGCGGAGTGCTTGGAAACGACTTGGTGACGATGGATTATACTCCGGCGAGGAAGAACCATCCGATCCATAACTAA
mRNA sequence
ATGGTTCTTAAGAAGGCATCAGCAGTTTCATGCAATAACATCCTTCAGCTATTGGCCTTCATCTTTCTGTTTTTTCTCCTCATCACAACCACAGGTTCTTCGGCGAGAAAGAGTTTGGTAGAAGGGAGGAGCCGAAATGAGGACGATCCATACGCCAAAAACCATGGCGGAGTGCTTGGAAACGACTTGGTGACGATGGATTATACTCCGGCGAGGAAGAACCATCCGATCCATAACTAA
Coding sequence (CDS)
ATGGTTCTTAAGAAGGCATCAGCAGTTTCATGCAATAACATCCTTCAGCTATTGGCCTTCATCTTTCTGTTTTTTCTCCTCATCACAACCACAGGTTCTTCGGCGAGAAAGAGTTTGGTAGAAGGGAGGAGCCGAAATGAGGACGATCCATACGCCAAAAACCATGGCGGAGTGCTTGGAAACGACTTGGTGACGATGGATTATACTCCGGCGAGGAAGAACCATCCGATCCATAACTAA
Protein sequence
MVLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVLGNDLVTMDYTPARKNHPIHN
Homology
BLAST of Cla97C02G027310 vs. NCBI nr
Match:
KGN62099.1 (hypothetical protein Csa_006414 [Cucumis sativus])
HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 0
Query: 1 MVLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVLG 60
MVLKK A SCNN+LQLLAFIFLFFLLITTTGSSAR SLVEGRSRN+DDPY KNH GV+G
Sbjct: 1 MVLKKTLAFSCNNLLQLLAFIFLFFLLITTTGSSAR-SLVEGRSRNDDDPYVKNHSGVIG 60
Query: 61 NDLVTMDYTPARKNHPIHN 80
NDLVTMDYTPARKNHPIHN
Sbjct: 61 NDLVTMDYTPARKNHPIHN 78
BLAST of Cla97C02G027310 vs. NCBI nr
Match:
KAG6571378.1 (hypothetical protein SDJN03_30293, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 106.7 bits (265), Expect = 9.4e-20
Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 0
Query: 2 VLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVLGN 61
+++K SAVSCN LQLL FIFLFFLL+T TGSS + L+EG SR E++P +NH GVLGN
Sbjct: 1 MVEKVSAVSCNGFLQLLLFIFLFFLLVTATGSSGGRRLIEGTSRTEENPLVENHDGVLGN 60
Query: 62 DLVTMDYTPARKNHPIHN 80
DLVTM YT A+ N P+HN
Sbjct: 61 DLVTMHYTSAKSNRPVHN 78
BLAST of Cla97C02G027310 vs. NCBI nr
Match:
KAG6605285.1 (hypothetical protein SDJN03_02602, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 2 VLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVL-- 61
++ KAS +S +L+LL+ +FLF LLITTTGS ++L+E +E+DP GG L
Sbjct: 1 MVMKASKLSFYRLLRLLSLLFLFILLITTTGSLGGRTLLEKTGHSEEDPLDIVRGGGLEN 60
Query: 62 GNDLVTMDYTPARKNHPIHN 80
NDLVTMDYTPA KN PIHN
Sbjct: 61 ANDLVTMDYTPATKNRPIHN 80
BLAST of Cla97C02G027310 vs. NCBI nr
Match:
KAG6605284.1 (hypothetical protein SDJN03_02601, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 68.9 bits (167), Expect = 2.2e-08
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0
Query: 2 VLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAK-NHGGVLG 61
++ KAS +SC +L+LL +FLF LL+TT GS SL+E +E+D A +HGG L
Sbjct: 1 MVPKASTLSCVRLLRLLPLLFLFILLVTTPGSFGAPSLLEKTRHSEEDQLATISHGGALE 60
Query: 62 N--DLVTMDYTPARKNHPIHN 80
N DL MDYTPA + P+HN
Sbjct: 61 NAYDLGAMDYTPAGPSPPVHN 81
BLAST of Cla97C02G027310 vs. NCBI nr
Match:
KAG6605283.1 (hypothetical protein SDJN03_02600, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 55.1 bits (131), Expect = 3.2e-04
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
Query: 12 NNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVLGN--DLVTMDYT 71
+ +L LA +FLF LL+T S + L+E E+D +HGG L N + MDYT
Sbjct: 6 STLLLQLALLFLFILLVTIPRSLGARGLLEKTGHGEEDQLVISHGGALENADGFLAMDYT 65
Query: 72 PARKNHPIHN 80
P++ N P+HN
Sbjct: 66 PSKANRPVHN 75
BLAST of Cla97C02G027310 vs. ExPASy TrEMBL
Match:
A0A0A0LM46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297230 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 4.9e-30
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 0
Query: 1 MVLKKASAVSCNNILQLLAFIFLFFLLITTTGSSARKSLVEGRSRNEDDPYAKNHGGVLG 60
MVLKK A SCNN+LQLLAFIFLFFLLITTTGSSAR SLVEGRSRN+DDPY KNH GV+G
Sbjct: 1 MVLKKTLAFSCNNLLQLLAFIFLFFLLITTTGSSAR-SLVEGRSRNDDDPYVKNHSGVIG 60
Query: 61 NDLVTMDYTPARKNHPIHN 80
NDLVTMDYTPARKNHPIHN
Sbjct: 61 NDLVTMDYTPARKNHPIHN 78
BLAST of Cla97C02G027310 vs. ExPASy TrEMBL
Match:
A0A444ZXP2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g063575 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04
Identity = 28/77 (36.36%), Postives = 46/77 (59.74%), Query Frame = 0
Query: 12 NNILQLLAFIFLFFLLITTTGSSARK------SLVEGRSRNEDDPYAKNHGG---VLGND 71
N +L ++AF+ L F+ +T G S R+ + +G ++ + + +NH G ++ D
Sbjct: 9 NRLLLVVAFLLLCFMSMTARGRSLREIATNKNGVDDGEKGHQSNVFKRNHEGTQEIISGD 68
Query: 72 LVTMDYTPARKNHPIHN 80
+ TMDYTPA+KN PIHN
Sbjct: 69 IDTMDYTPAKKNPPIHN 85
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN62099.1 | 1.0e-29 | 88.61 | hypothetical protein Csa_006414 [Cucumis sativus] | [more] |
| KAG6571378.1 | 9.4e-20 | 64.10 | hypothetical protein SDJN03_30293, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6605285.1 | 3.6e-11 | 53.75 | hypothetical protein SDJN03_02602, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6605284.1 | 2.2e-08 | 48.15 | hypothetical protein SDJN03_02601, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6605283.1 | 3.2e-04 | 40.00 | hypothetical protein SDJN03_02600, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LM46 | 4.9e-30 | 88.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297230 PE=4 SV=1 | [more] |
| A0A444ZXP2 | 4.6e-04 | 36.36 | Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g063575 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
