Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAATCGACCTTTGGGAATCCACGATCTTCGTCTTCGACTCGATGCCAGACTACATCCGTGCGGTCATTGTGAACCCAAAACTTCAGCTGCTCAGCGGGGCCATACCATCAATTTTGATAGCCGGTGGATTCCACACGAACCTTCCAAATTTCAAGTACCGGCCGTGGGAAGTGAAGCGATCCAGGGCTACACTTCAGTGGGGAAAATCCCTCGACCATGAGATTTTTTCTTGTAAATTTTTAGAGTATCTTGTAACGAATACTAATAAAGATAGTTTAATTTTGAACAATATACTTGTATTTAGGAAATAATATGTAGCTAAATTATGGGCAGACAAATTTTTATAGTAATCAATAATATCAGTATTCGTGTACATCTATTGTTATTATACTTAATTTAATCCAATTGTTTTATCAATTGCAAGTATTCGTGTCCATTTCTCGTATTACAATAGATGTACTAAGCAAACATTTAATATATACAAAACAATCGTTTAATATTGTGACACCCCAATTTTCAGGTATTATATATCCTTTTGGCCTTTATTTTGATTTGGAATAATATTTATTAAAGAAAAAGGGAAATTAATTTTGGAAGGAAAGAGAAAAGGGAATTTAATTTGGTATAAAAGGGGGAAATTAATTTTGGAAGGAAAGAGAAGAGGGAATTTAATTTAGAATAAAAGGGGTAACTAATTTTGGAAGGGAAGAGAAGAGGGAAATTAATTTTGAAATTAATTAGGGTTTTCTTTTTAGGTTAATTAAGGGTGCCTGGTTTTGTGTGCAGCCCACTCTCTCTCTCTCCTGTCGTCGCATGCATACACACACACCCTCTCTCTCTCGCAGATCTCTCTCCCGTCCGGCTCCCTCTCTCTCAGTTTCTCTCCACGCCAGCTCACTCTCTTTCGCGCACCGCTCTCTTTCCCTATCACGGTGTCAAACTCTCTCCCGCGCACCGTCTCGCTCTCTTTCCCTATCGCAGCATCAAACTCTCTCTTGGGTCTCGCTGTCTTGCTCATCGTCACGCTCTCTTTCCTTGTCGCGGCGTCAGTCTCTCTCGAGTCTCGCTGTCTCGCTCACTGTCTCACTCTCGCTAGACTCTCGCTCTCCCTCACAGTAGTACATTTCTCCGTCTCCCTTTATCTCTCAGTTTTACTCAGCCGACAGCACCTCTCTAACATGTTTCTCTCTCAGCTACTCCTCCTCACGTCGCCGCTGTGCCGCCGCCATCGAATCTTCCTCTCGAACGCTGCTGCTGCTGCCGCTGCCGTCGTTAGACTTCTCTCTTCACCGCCGCCGCTGTCTTTTACCGCAATTCAATCGAGGTTAGGCAGTATGCCATTGCTTGGTTTTTTCTGGGTTGAATACGTGACTGGTTTAATTGTGGGTTATTGCTATTGTGGGTATGTCAGGATTTTCAACCCAAGTTTCTGGACGAGATTTGAGTTGCGTAGTCAAGTGACTAAACCAAATCTCACTGTAAGTAATTGCCCTACCGACGGCTTACTGACGGTATCGCTAGACTCGATACCTCGAATTTCTAGACTGTTTCTCTAATAATTGGAATGGTTGTATAGCTTGTCCATGTTGTTACCTAATTTGGATGTTTGGACTGTCGCTTCCGATCAATAGAACCTTGGGTAGGTTTAGCACATGTACATTTTGTCAGTGTAACATCCTCTGTAGGTGCATACACAACGCGTTAGATACCAGGCTCAGGTGACCACAGGGTAGATACCATGATAGTATGCTATAGACTCCATTTACCCCTTAATGCATATTATTGTTCCCTACGTTGGCAGCATGCTCATCAGTTCGTGTCTCTTCGGGGCACCAGTATGTGTTCCTTCGGGATCACCAGTTTGTGATCCTTCAGATCACCAGTATGTGTTCCTTCAGGACACCAGTTTGTGATCCTTCGGGATCACCAATATGTGTTTCTTGGGAATCACCAGTTTGTGAACGCGTTTCGCCAACGATAGGGGTTATCTATGCTAACTTCATGTTGTATGCATACAGATTCAATGTTTAGTTGAGCCCGGTAGCAGGATTACTTACTGAGTATCTTCATACTCATCCTTTTCTTTTATACCTCCAGGTAAGGGAAAGAACGTGTCGGTGAATGACAAGAAGAATCCTTGA
mRNA sequence
ATGGCTGCAATCGACCTTTGGGAATCCACGATCTTCGTCTTCGACTCGATGCCAGACTACATCCGTGCGGTCATTGTGAACCCAAAACTTCAGCTGCTCAGCGGGGCCATACCATCAATTTTGATAGCCGGTGGATTCCACACGAACCTTCCAAATTTCAAGTACCGGCCGTGGGAAGTGAAGCGATCCAGGGCTACACTTCAGTGGGGAAAATCCCTCGACCATGAGATTTTTTCTTGTAAATTTTTAGAGTATCTTATCTCTCTCCCGTCCGGCTCCCTCTCTCTCAGTTTCTCTCCACGCCAGCTCACTCTCTTTCGCGCACCGCTCTCTTTCCCTATCACGGTGTCAAACTCTCTCCCGCGCACCGTCTCGCTCTCTTTCCCTATCGCAGCATCAAACTCTCTCTTGGGTCTCGCTGTCTTGCTCATCGTCACGCTCTCTTTCCTTGTCGCGGCGTCAGTCTCTCTCGAGTCTCGCTGTCTCGCTCACTGTCTCACTCTCGCTAGACTCTCGCTCTCCCTCACAGTAGTACATTTCTCCGTCTCCCTTTATCTCTCAGTTTTACTCAGCCGACAGCACCTCTCTAACATGTTTCTCTCTCAGCTACTCCTCCTCACGTCGCCGCTGTGCCGCCGCCATCGAATCTTCCTCTCGAACGCTGCTGCTGCTGCCGCTGCCGTCGTTAGACTTCTCTCTTCACCGCCGCCGCTGTCTTTTACCGCAATTCAATCGAGGTTAGGCAGTATGCCATTGCTTGGTTTTTTCTGGGTTGAATACGTGACTGGTTTAATTGTGGGTTATTGCTATTGTGGGTATGTCAGGATTTTCAACCCAAGTTTCTGGACGAGATTTGAGTTGCGTAGTCAAGTGACTAAACCAAATCTCACTGTAAGTAATTGCCCTACCGACGGCTTACTGACGTGTAACATCCTCTGTAGGTGCATACACAACGCGTTAGATACCAGGCTCAGCATGCTCATCAGTTCGTGTCTCTTCGGGGCACCAGTATGTGTTCCTTCGGGATCACCAGTTTGTGATCCTTCAGATCACCAGTATGTGTTCCTTCAGGACACCAGTAAGGGAAAGAACGTGTCGGTGAATGACAAGAAGAATCCTTGA
Coding sequence (CDS)
ATGGCTGCAATCGACCTTTGGGAATCCACGATCTTCGTCTTCGACTCGATGCCAGACTACATCCGTGCGGTCATTGTGAACCCAAAACTTCAGCTGCTCAGCGGGGCCATACCATCAATTTTGATAGCCGGTGGATTCCACACGAACCTTCCAAATTTCAAGTACCGGCCGTGGGAAGTGAAGCGATCCAGGGCTACACTTCAGTGGGGAAAATCCCTCGACCATGAGATTTTTTCTTGTAAATTTTTAGAGTATCTTATCTCTCTCCCGTCCGGCTCCCTCTCTCTCAGTTTCTCTCCACGCCAGCTCACTCTCTTTCGCGCACCGCTCTCTTTCCCTATCACGGTGTCAAACTCTCTCCCGCGCACCGTCTCGCTCTCTTTCCCTATCGCAGCATCAAACTCTCTCTTGGGTCTCGCTGTCTTGCTCATCGTCACGCTCTCTTTCCTTGTCGCGGCGTCAGTCTCTCTCGAGTCTCGCTGTCTCGCTCACTGTCTCACTCTCGCTAGACTCTCGCTCTCCCTCACAGTAGTACATTTCTCCGTCTCCCTTTATCTCTCAGTTTTACTCAGCCGACAGCACCTCTCTAACATGTTTCTCTCTCAGCTACTCCTCCTCACGTCGCCGCTGTGCCGCCGCCATCGAATCTTCCTCTCGAACGCTGCTGCTGCTGCCGCTGCCGTCGTTAGACTTCTCTCTTCACCGCCGCCGCTGTCTTTTACCGCAATTCAATCGAGGTTAGGCAGTATGCCATTGCTTGGTTTTTTCTGGGTTGAATACGTGACTGGTTTAATTGTGGGTTATTGCTATTGTGGGTATGTCAGGATTTTCAACCCAAGTTTCTGGACGAGATTTGAGTTGCGTAGTCAAGTGACTAAACCAAATCTCACTGTAAGTAATTGCCCTACCGACGGCTTACTGACGTGTAACATCCTCTGTAGGTGCATACACAACGCGTTAGATACCAGGCTCAGCATGCTCATCAGTTCGTGTCTCTTCGGGGCACCAGTATGTGTTCCTTCGGGATCACCAGTTTGTGATCCTTCAGATCACCAGTATGTGTTCCTTCAGGACACCAGTAAGGGAAAGAACGTGTCGGTGAATGACAAGAAGAATCCTTGA
Protein sequence
MAAIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKRSRATLQWGKSLDHEIFSCKFLEYLISLPSGSLSLSFSPRQLTLFRAPLSFPITVSNSLPRTVSLSFPIAASNSLLGLAVLLIVTLSFLVAASVSLESRCLAHCLTLARLSLSLTVVHFSVSLYLSVLLSRQHLSNMFLSQLLLLTSPLCRRHRIFLSNAAAAAAAVVRLLSSPPPLSFTAIQSRLGSMPLLGFFWVEYVTGLIVGYCYCGYVRIFNPSFWTRFELRSQVTKPNLTVSNCPTDGLLTCNILCRCIHNALDTRLSMLISSCLFGAPVCVPSGSPVCDPSDHQYVFLQDTSKGKNVSVNDKKNP
Homology
BLAST of Cla97C01G012680 vs. NCBI nr
Match:
XP_038874932.1 (uncharacterized protein LOC120067442 [Benincasa hispida])
HSP 1 Score: 90.1 bits (222), Expect = 4.3e-14
Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 0
Query: 1 MAAIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEV 60
M AIDL TIFVFDSMP+YI + IV+ LQL+ AIPS+LI F KY WEV
Sbjct: 259 MLAIDLERCTIFVFDSMPNYIGSDIVDSYLQLVVRAIPSMLIPIQFDIQHKRLKYGQWEV 318
Query: 61 KRSRATLQWGKSLDHEIFSCKFLEYLI-SLPSGSLS 96
KRS+ TLQ G SLD +F KF+EY + S+ SL+
Sbjct: 319 KRSKVTLQEGMSLDCGVFCAKFMEYCVTSIDKASLT 354
BLAST of Cla97C01G012680 vs. NCBI nr
Match:
XP_038902369.1 (uncharacterized protein LOC120089004 [Benincasa hispida])
HSP 1 Score: 86.3 bits (212), Expect = 6.2e-13
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 0
Query: 1 MAAIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEV 60
M AIDL TIFVFDSMP+YI + I++ L+L++ AIP +LI+ GF KY WEV
Sbjct: 114 MLAIDLERCTIFVFDSMPNYIGSDILDGYLKLVARAIPLMLISVGFDKQHKTVKYGQWEV 173
Query: 61 KRSRATLQWGKSLDHEIFSCKFLEYLIS 89
KRS+ TLQ GKSLD F KF+E ++
Sbjct: 174 KRSKVTLQEGKSLDCGTFCAKFVENCVT 201
BLAST of Cla97C01G012680 vs. NCBI nr
Match:
KAA0054420.1 (MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 84.7 bits (208), Expect = 1.8e-12
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + +L +F Y PW ++R
Sbjct: 1175 AADMRKCRIYVFDSMPNYVEQKLVDEALQMPARCIPSLAIAIGVNLHLDHFTYGPWPIRR 1234
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 1235 SKATLQKGRSLDCGIFCAKFVECLVT 1260
BLAST of Cla97C01G012680 vs. NCBI nr
Match:
KAA0047742.1 (MuDRA-like transposase [Cucumis melo var. makuwa])
HSP 1 Score: 84.7 bits (208), Expect = 1.8e-12
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A DL + I+VFDSMP+Y+ +VN LQ+ + IPS+ IA G + + +F Y PW ++R
Sbjct: 1022 AADLRKCKIYVFDSMPNYVEQKLVNETLQMPARCIPSLAIAIGVNLHSDHFTYDPWPIRR 1081
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 1082 SKATLQKGRSLDCGIFCSKFVECLVT 1107
BLAST of Cla97C01G012680 vs. NCBI nr
Match:
KAA0033924.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])
HSP 1 Score: 84.7 bits (208), Expect = 1.8e-12
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + +L +F Y PW ++R
Sbjct: 682 AADMRKCRIYVFDSMPNYVEQKLVDEALQMHARCIPSLAIAIGVNLHLDHFTYGPWPIRR 741
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 742 SKATLQKGRSLDCGIFCAKFVECLVT 767
BLAST of Cla97C01G012680 vs. ExPASy TrEMBL
Match:
A0A5A7UGN1 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001710 PE=3 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 8.8e-13
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + +L +F Y PW ++R
Sbjct: 1175 AADMRKCRIYVFDSMPNYVEQKLVDEALQMPARCIPSLAIAIGVNLHLDHFTYGPWPIRR 1234
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 1235 SKATLQKGRSLDCGIFCAKFVECLVT 1260
BLAST of Cla97C01G012680 vs. ExPASy TrEMBL
Match:
A0A5A7SRW2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G001150 PE=3 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 8.8e-13
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + +L +F Y PW ++R
Sbjct: 682 AADMRKCRIYVFDSMPNYVEQKLVDEALQMHARCIPSLAIAIGVNLHLDHFTYGPWPIRR 741
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 742 SKATLQKGRSLDCGIFCAKFVECLVT 767
BLAST of Cla97C01G012680 vs. ExPASy TrEMBL
Match:
A0A5A7TW86 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1059G00010 PE=3 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 8.8e-13
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A DL + I+VFDSMP+Y+ +VN LQ+ + IPS+ IA G + + +F Y PW ++R
Sbjct: 1022 AADLRKCKIYVFDSMPNYVEQKLVNETLQMPARCIPSLAIAIGVNLHSDHFTYDPWPIRR 1081
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 1082 SKATLQKGRSLDCGIFCSKFVECLVT 1107
BLAST of Cla97C01G012680 vs. ExPASy TrEMBL
Match:
A0A5A7TAS2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00820 PE=3 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + + NF Y PW ++R
Sbjct: 760 AADMRKCRIYVFDSMPNYVEQKLVDEALQMPARCIPSLAIAIGVNLHSDNFTYGPWPIRR 819
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 820 SKATLQKGRSLDCGIFCAKFVECLVT 845
BLAST of Cla97C01G012680 vs. ExPASy TrEMBL
Match:
A0A5A7SWX1 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G001350 PE=3 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 0
Query: 3 AIDLWESTIFVFDSMPDYIRAVIVNPKLQLLSGAIPSILIAGGFHTNLPNFKYRPWEVKR 62
A D+ + I+VFDSMP+Y+ +V+ LQ+ + IPS+ IA G + + NF Y PW ++R
Sbjct: 506 AADMRKCRIYVFDSMPNYVEQKLVDEALQMPARCIPSLAIAIGVNLHSDNFTYGPWPIRR 565
Query: 63 SRATLQWGKSLDHEIFSCKFLEYLIS 89
S+ATLQ G+SLD IF KF+E L++
Sbjct: 566 SKATLQKGRSLDCGIFCAKFVECLVT 591
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UGN1 | 8.8e-13 | 46.51 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2... | [more] |
| A0A5A7SRW2 | 8.8e-13 | 46.51 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4305... | [more] |
| A0A5A7TW86 | 8.8e-13 | 47.67 | MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1... | [more] |
| A0A5A7TAS2 | 1.1e-12 | 46.51 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G... | [more] |
| A0A5A7SWX1 | 1.1e-12 | 46.51 | Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
