ClCG11G008950 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G008950
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Enzymatic polyprotein
Location	CG_Chr11: 13335920 .. 13337097 (-)
RNA-Seq Expression	ClCG11G008950
Synteny	ClCG11G008950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTAATTGAAACCAACCTAAATAAATCCCCAGTTAGTATCCCAAAACTGCTATCTTGGGATATGTTGACTAAAAATCCTAAATGGATTTTAGATAATACTTTTGTCCCTTCGAAAAGAGAGAAAGAACTCTCTCACGTCATTGAACATCTCAATGGAAGAGTAGAAATCAAATTTAAGGAAGAACTACCCAGGTTCCCAGTCATCAAAGAAAATATGAGCACTAAGGAATTCATAAGCTCAAGGCCAAGCACGTCTAGTATAAAGACAAAATCTCATCTAAACCTTAATAGAACAAATTCTGTTAAGATAAGTTCTATTAGATTAGAACATGATATTCCAGATCTTCATTATGAAGAAGAAAGACCATCCTCTCCTTCTCAAACAGAGATGGAAGTAGCATATATTTTCAAAAGCCAATTAAATGTTATTATTTCTAAGTTTAAATTAGATAAAATAGTCCTACAAAAAGAATTTATGTTAAAAGAAAACAAAAGGGATAGATTAGCGGTTTTCAAAACCTATTCAAAAGAAGAAAGAAATGCTTTCAAGGAAGAATATTTTGAGACTCTTGAAACACTAGGAGAGAATATTTCTTTCTTCGAATGGTTCAACCAAAGAAAAGAATTTAAAGATCTTTGCGTCCTTGAAGGAAAAGAAGTTTGGAAAATAATTTAGAGAGGCGAAATTCGATCTGAATTTCCTCCAATGGAAGATGTTGAATTAAGAGTTTCTATAATGAAACCATTCTAGCAAAGTCATTTCAATTAATAAAAGAATCAGAAGAAAACAAGCCTCCAACCAACAAAGAAATTAAAAGCATACAACTTCAAGATAACTATTCAAATAGAACTCTTTCTTCAATAGCTGGGCAAGTTTTTAAATTTGAAGAATTGCTCTACCCACCTATAGAGAGATACGAAGATCCTCTTTTTAGGCCTCATGCAAAAATTAAATTAAATTCCAAGAAGAATCAAATGCTTAAAGAAATCGATAAAAAATTAATAGCTTTAAAGATTGATGAAGGAACATCAAAGCAATTGAATGTCATAAATGAAACTGAGGCTGAAAACCTCATTAAAGAACTTGAGAATTTTCATATAGAAAATTTTCAAACACTAGATGCTAATAGAATAAAATACCGTACGTCGATAAATGAGTCTGATAAATTCAAT

mRNA sequence

ATGATGCTAATTGAAACCAACCTAAATAAATCCCCAGTTAGTATCCCAAAACTGCTATCTTGGGATATGTTGACTAAAAATCCTAAATGGATTTTAGATAATACTTTTGTCCCTTCGAAAAGAGAGAAAGAACTCTCTCACGTCATTGAACATCTCAATGGAAGAGTAGAAATCAAATTTAAGGAAGAACTACCCAGGTTCCCAGTCATCAAAGAAAATATGAGCACTAAGGAATTCATAAGCTCAAGGCCAAGCACGTCTAGTATAAAGACAAAATCTCATCTAAACCTTAATAGAACAAATTCTGTTAAGATAAGTTCTATTAGATTAGAACATGATATTCCAGATCTTCATTATGAAGAAGAAAGACCATCCTCTCCTTCTCAAACAGAGATGGAAGTAGCATATATTTTCAAAAGCCAATTAAATAGTTTCTATAATGAAACCATTCTAGCAAAGTCATTTCAATTAATAAAAGAATCAGAAGAAAACAAGCCTCCAACCAACAAAGAAATTAAAAGCATACAACTTCAAGATAACTATTCAAATAGAACTCTTTCTTCAATAGCTGGGCAAGTTTTTAAATTTGAAGAATTGCTCTACCCACCTATAGAGAGATACGAAGATCCTCTTTTTAGGCCTCATGCAAAAATTAAATTAAATTCCAAGAAGAATCAAATGCTTAAAGAAATCGATAAAAAATTAATAGCTTTAAAGATTGATGAAGGAACATCAAAGCAATTGAATGTCATAAATGAAACTGAGGCTGAAAACCTCATTAAAGAACTTGAGAATTTTCATATAGAAAATTTTCAAACACTAGATGCTAATAGAATAAAATACCGTACGTCGATAAATGAGTCTGATAAATTCAAT

Coding sequence (CDS)

ATGATGCTAATTGAAACCAACCTAAATAAATCCCCAGTTAGTATCCCAAAACTGCTATCTTGGGATATGTTGACTAAAAATCCTAAATGGATTTTAGATAATACTTTTGTCCCTTCGAAAAGAGAGAAAGAACTCTCTCACGTCATTGAACATCTCAATGGAAGAGTAGAAATCAAATTTAAGGAAGAACTACCCAGGTTCCCAGTCATCAAAGAAAATATGAGCACTAAGGAATTCATAAGCTCAAGGCCAAGCACGTCTAGTATAAAGACAAAATCTCATCTAAACCTTAATAGAACAAATTCTGTTAAGATAAGTTCTATTAGATTAGAACATGATATTCCAGATCTTCATTATGAAGAAGAAAGACCATCCTCTCCTTCTCAAACAGAGATGGAAGTAGCATATATTTTCAAAAGCCAATTAAATAGTTTCTATAATGAAACCATTCTAGCAAAGTCATTTCAATTAATAAAAGAATCAGAAGAAAACAAGCCTCCAACCAACAAAGAAATTAAAAGCATACAACTTCAAGATAACTATTCAAATAGAACTCTTTCTTCAATAGCTGGGCAAGTTTTTAAATTTGAAGAATTGCTCTACCCACCTATAGAGAGATACGAAGATCCTCTTTTTAGGCCTCATGCAAAAATTAAATTAAATTCCAAGAAGAATCAAATGCTTAAAGAAATCGATAAAAAATTAATAGCTTTAAAGATTGATGAAGGAACATCAAAGCAATTGAATGTCATAAATGAAACTGAGGCTGAAAACCTCATTAAAGAACTTGAGAATTTTCATATAGAAAATTTTCAAACACTAGATGCTAATAGAATAAAATACCGTACGTCGATAAATGAGTCTGATAAATTCAAT

Protein sequence

MMLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFKEELPRFPVIKENMSTKEFISSRPSTSSIKTKSHLNLNRTNSVKISSIRLEHDIPDLHYEEERPSSPSQTEMEVAYIFKSQLNSFYNETILAKSFQLIKESEENKPPTNKEIKSIQLQDNYSNRTLSSIAGQVFKFEELLYPPIERYEDPLFRPHAKIKLNSKKNQMLKEIDKKLIALKIDEGTSKQLNVINETEAENLIKELENFHIENFQTLDANRIKYRTSINESDKFN

Homology

[Close]

BLAST of ClCG11G008950 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 8.9e-15
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + +IE  +G VE++F 
Sbjct: 144 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASIIEFPDGNVEVQFN 203

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSRPSTSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 204 TGI-SYPRISEIM------SSRPSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 263

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q+ ME
Sbjct: 264 EKEDESLSPTQSNME 270

[Close]

BLAST of ClCG11G008950 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGEIAPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSR STSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRQSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 E-EERPSSPSQTEME 134
           E E+R  SP+Q++ME
Sbjct: 358 EKEDRSLSPTQSDME 364

[Close]

BLAST of ClCG11G008950 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGEIAPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSR STSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRQSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 E-EERPSSPSQTEME 134
           E E+R  SP+Q++ME
Sbjct: 358 EKEDRSLSPTQSDME 364

[Close]

BLAST of ClCG11G008950 vs. NCBI nr
Match: KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 9.8e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P  R    + + E  +G VE++F 
Sbjct: 239 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETAPVTRSSTEASITEFPDGNVEVQFN 298

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             L  +P I E M      SSRPSTSSIK+++     L R+ S++ +S+   H IPD+HY
Sbjct: 299 SGL-SYPKISEIM------SSRPSTSSIKSEASYRETLRRSESIR-ASVDFSHTIPDIHY 358

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q++ME
Sbjct: 359 EKEDGSLSPTQSDME 365

[Close]

BLAST of ClCG11G008950 vs. NCBI nr
Match: TYK28080.1 (movement protein [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-13
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSRPSTSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRPSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q++ E
Sbjct: 358 EKEDGSLSPTQSDTE 364

[Close]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-15
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + +IE  +G VE++F 
Sbjct: 144 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASIIEFPDGNVEVQFN 203

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSRPSTSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 204 TGI-SYPRISEIM------SSRPSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 263

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q+ ME
Sbjct: 264 EKEDESLSPTQSNME 270

[Close]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGEIAPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSR STSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRQSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 E-EERPSSPSQTEME 134
           E E+R  SP+Q++ME
Sbjct: 358 EKEDRSLSPTQSDME 364

[Close]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGEIAPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSR STSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRQSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 E-EERPSSPSQTEME 134
           E E+R  SP+Q++ME
Sbjct: 358 EKEDRSLSPTQSDME 364

[Close]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL
Match: A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.7e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P  R    + + E  +G VE++F 
Sbjct: 239 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETAPVTRSSTEASITEFPDGNVEVQFN 298

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             L  +P I E M      SSRPSTSSIK+++     L R+ S++ +S+   H IPD+HY
Sbjct: 299 SGL-SYPKISEIM------SSRPSTSSIKSEASYRETLRRSESIR-ASVDFSHTIPDIHY 358

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q++ME
Sbjct: 359 EKEDGSLSPTQSDME 365

[Close]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL
Match: A0A5D3DXV6 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003440 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.2e-14
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 2   MLIETNLNKSPVSIPKLLSWDMLTKNPKWILDNTFVPSKREKELSHVIEHLNGRVEIKFK 61
           ML+E N+ KS ++IP+ L WD LTKNP W L     P KR    + + E  +G VE++F 
Sbjct: 238 MLMEVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASITEFPDGNVEVQFN 297

Query: 62  EELPRFPVIKENMSTKEFISSRPSTSSIKTKSHL--NLNRTNSVKISSIRLEHDIPDLHY 121
             +  +P I E M      SSRPSTSSIKT++     L R+ S++ +S+   H IPD+HY
Sbjct: 298 TGI-SYPRISEIM------SSRPSTSSIKTETSYRDTLRRSESIR-ASVDFSHTIPDVHY 357

Query: 122 EEERPS-SPSQTEME 134
           E+E  S SP+Q++ E
Sbjct: 358 EKEDGSLSPTQSDTE 364

The following BLAST results are available for this feature:

BLAST of ClCG11G008950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057417.1	8.9e-15	44.44	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]
TYJ98087.1	5.7e-14	42.96	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	5.7e-14	42.96	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0056776.1	9.8e-14	42.96	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYK28080.1	1.3e-13	42.96	movement protein [Cucumis melo var. makuwa]	[more]

BLAST of ClCG11G008950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G008950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URX9	4.3e-15	44.44	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]
A0A5D3BG41	2.8e-14	42.96	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	2.8e-14	42.96	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7UR29	4.7e-14	42.96	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48...	[more]
A0A5D3DXV6	6.2e-14	42.96	Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003...	[more]

BLAST of ClCG11G008950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G008950.1	ClCG11G008950.1	mRNA