
ClCG11G008540 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGATCCCCTACCTCTCCTTCTTCCCCACAGATCCGCCGCTCATCATGTTAGCCGCCGCCTCTTCCTGGCTTCATTCCAGCCGGAGCCGGAGCCGTAGCCGCTTTCTCTTTCTCTTGGTTTGTTCCCCTCTCTTCATTCCCATTTTCTGCGCTACTTTCCCCTTCATCTTTGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGATATATCTTCACGATTCACCAGAAATCGAACGCTTGCAGGAATGTGAGGAAGGCGGCTGCAGACCACCGCTTCCGGAGCAGATTGGCGGTGACAGTGGGGAGGAGATCGGCTTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGTTCTGTTTATGAATGTGCTGATTGTAGCGACCACTTAAATGGGGATCCTCCATTTTGTAACATTAAAAATAGTAATTTGACTCCACTATTAGGTTGA ATGTCTTCGATCCCCTACCTCTCCTTCTTCCCCACAGATCCGCCGCTCATCATGTTAGCCGCCGCCTCTTCCTGGCTTCATTCCAGCCGGAGCCGGAGCCGTAGCCGCTTTCTCTTTCTCTTGGTTTGTTCCCCTCTCTTCATTCCCATTTTCTGCGCTACTTTCCCCTTCATCTTTGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGATATATCTTCACGATTCACCAGAAATCGAACGCTTGCAGGAATGTGAGGAAGGCGGCTGCAGACCACCGCTTCCGGAGCAGATTGGCGGTGACAGTGGGGAGGAGATCGGCTTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGTTCTGTTTATGAATGTGCTGATTGTAGCGACCACTTAAATGGGGATCCTCCATTTTGTAACATTAAAAATAGTAATTTGACTCCACTATTAGGTTGA ATGTCTTCGATCCCCTACCTCTCCTTCTTCCCCACAGATCCGCCGCTCATCATGTTAGCCGCCGCCTCTTCCTGGCTTCATTCCAGCCGGAGCCGGAGCCGTAGCCGCTTTCTCTTTCTCTTGGTTTGTTCCCCTCTCTTCATTCCCATTTTCTGCGCTACTTTCCCCTTCATCTTTGCCATAGATCTCTGCATCCGCCTTGCTCGTCACAGGAGAAGGATATATCTTCACGATTCACCAGAAATCGAACGCTTGCAGGAATGTGAGGAAGGCGGCTGCAGACCACCGCTTCCGGAGCAGATTGGCGGTGACAGTGGGGAGGAGATCGGCTTATTACAGAGGTACTTGGATGATCAGCTACTGCTCGTTCGTTCTGTTTATGAATGTGCTGATTGTAGCGACCACTTAAATGGGGATCCTCCATTTTGTAACATTAAAAATAGTAATTTGACTCCACTATTAGGTTGA MSSIPYLSFFPTDPPLIMLAAASSWLHSSRSRSRSRFLFLLVCSPLFIPIFCATFPFIFAIDLCIRLARHRRRIYLHDSPEIERLQECEEGGCRPPLPEQIGGDSGEEIGLLQRYLDDQLLLVRSVYECADCSDHLNGDPPFCNIKNSNLTPLLG Homology
BLAST of ClCG11G008540 vs. NCBI nr
Match: XP_022962190.1 (uncharacterized protein LOC111462719 [Cucurbita moschata] >KAG7033430.1 hypothetical protein SDJN02_07486, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.1 bits (531), Expect = 2.6e-50 Identity = 109/159 (68.55%), Postives = 122/159 (76.73%), Query Frame = 0
BLAST of ClCG11G008540 vs. NCBI nr
Match: XP_023550754.1 (uncharacterized protein LOC111808798 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49 Identity = 108/159 (67.92%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of ClCG11G008540 vs. NCBI nr
Match: XP_022990172.1 (uncharacterized protein LOC111487144 [Cucurbita maxima]) HSP 1 Score: 202.2 bits (513), Expect = 3.2e-48 Identity = 106/159 (66.67%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of ClCG11G008540 vs. NCBI nr
Match: XP_022152501.1 (uncharacterized protein LOC111020213 [Momordica charantia]) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47 Identity = 108/159 (67.92%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of ClCG11G008540 vs. NCBI nr
Match: KAG6602743.1 (hypothetical protein SDJN03_07976, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.1 bits (505), Expect = 2.7e-47 Identity = 98/136 (72.06%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of ClCG11G008540 vs. ExPASy TrEMBL
Match: A0A6J1HEC7 (uncharacterized protein LOC111462719 OS=Cucurbita moschata OX=3662 GN=LOC111462719 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50 Identity = 109/159 (68.55%), Postives = 122/159 (76.73%), Query Frame = 0
BLAST of ClCG11G008540 vs. ExPASy TrEMBL
Match: A0A6J1JHX7 (uncharacterized protein LOC111487144 OS=Cucurbita maxima OX=3661 GN=LOC111487144 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48 Identity = 106/159 (66.67%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of ClCG11G008540 vs. ExPASy TrEMBL
Match: A0A6J1DHX6 (uncharacterized protein LOC111020213 OS=Momordica charantia OX=3673 GN=LOC111020213 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.0e-47 Identity = 108/159 (67.92%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of ClCG11G008540 vs. ExPASy TrEMBL
Match: M5XT02 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G555000 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22 Identity = 68/119 (57.14%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of ClCG11G008540 vs. ExPASy TrEMBL
Match: A0A6J5WCG8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS10400 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22 Identity = 68/119 (57.14%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of ClCG11G008540 vs. TAIR 10
Match: AT1G35430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09170.1); Has 23 Blast hits to 23 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of ClCG11G008540 vs. TAIR 10
Match: AT4G09170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35430.1); Has 23 Blast hits to 23 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08 Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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