ClCG11G005640 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGTTGATATGGTGGCTGGAACCGAATCCATTGTATAAAAACTTCCTAATTTTTGTATTAGGTTTGTCATTGGATTTGGAAGACGAATTGAGAGAAAAAAAATGGCAGGTGAATCGACTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAAGCCGCTGCCGGCTGGGGTATCGCCGCCGCCACTACTGCTCTGTGGGTCGTTCAGGTTTTCTCCTTTCCTAAACTCATCGATCTATACTATTATTTATGGTTTTCGGAGATTTATACAGTGAATCTTTTGACTCTCTATGTTAGATTAAAGGATGCATCGATCTTCTTGAAACTTGATTCCTGATTCTGCTGTCTTACGTATACCGTCTTTATGATTTCTGTTTCTTGTCTTGGACGATTTACCTTGGCGTATTCGGATTTCTATTTTTACTCCAGCGTTAATATAGTGATTACGGGATTAGCTTTCATTTTCAGTTTGTCATTCGCAATAGAGATCTGAAAGAAATAAATTCCTATGGATTATGGTGTCTATGGATATACGTATTCCTCGTTGATTAGGAGCAGAGAGATTTATTTTTATCTGTTTTCTTCTTTTTGGTATGTCATCGAGCACAAGATGATACTCTTGCCCAGTTTTGTATGATAACTAGTAGAATTGTAGAAATATTAAGAGATGTAGTGCACTAAGATTTTTTACACTCTACATATTTCTAGAACTCAAGGATACAACCTTTTGAACAAAGGTAAGGCTATTTAGACATTGAATCTCACAAGTTTCTAAAAATTTGTAGTAGTTCATTATATATGGCTCCACTTCCTGCCGTCCTCATGATCACACTCTGGTTCCACATTGTAAGTTTGTTTTACTTCCAATTCCAATCCAAGTTCAGTTTCAGTATGGAGCTTTTAGCCCCTCACAGAGACCTAAGGCCTTACCTGAGCGAAAGTTTTGATCCTCTACCCTTTCTGTTTATACAGTCTTTTCCAAATTCCATAATTGTATCACTATAGTTGGCTTCATTTGTTAGTTTTAAACCATTAGTTAACTTTCTACCGGTACCTGCTGCAAAATTTCCATCGACGCCACCAACCAAAAGCCTAATCCTAACTGCCATCAATACTCTCAAACAGTCCTGAGATAATGTCAAAAACTTTGTTGTTTGCACTTTTTACCTGAGGTTCCGTCCATCAGGCTTTCCATCAAAACTCACAACTGATATCTTGGAACTCCTAGGATCTGGCATTCATTTTGCAGTGAAGTATTGTTATGCTCAAAACATATCCTCCTCTCATTGCAACTATTTATGGAAAGACCTCTCACAATAGTCAATGTTTCTTTCTAGTACAAGCCACTCCATAGAGTTACGACCACATTGCAATTCTACTATTACCAAATTCGGATTTGATCTCCGTTCTATCAAACACGTTCTTTGCACTTCCTTCAAGGAATCCCCAAAATTGGAGTGCTCTAATGCACAAGCTAATGGATCCCATGTAATTTTATTTAACAAATTTGATTGATGGTATGGGGTTTTATTAGCTCTATTCCTCTTTCTCTGCTCCTCATGTTCTTTTTCTATATGCTTAGTAAACGTTCTCAACTCCCCCTCCTTAACTAACAATAACTACATCGTTGCCTCTCCTTTTCTACTGATTAGGTTCACTGCTGTTTTTTGTTCCTTTCCCAACTAAACCATAATGGACTTGTTTTCTTTGCTGTGTGTTTTTTCCGATTTATTGCTTGAGAAAAACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATCTACAAATTTTTGGGTTCCAGATGGGCTCCATCACCTTTGATAGGGAGAATGCATTATCCTATCTTGGTTGGGTTTTTATTAATTCTTATTTTGTGAAGTTTTCTGTATTGCATTGCAAATAAAGGGATATAGATTTGATTATGTTCATTTTCCCTGATTGTTTCGCGAGGCTGCAAACCAACGTAAATTGGTTTGAGTTTTCAAATATTCATTTCTTTGCCTAAACAGTTTGTTCCAATTAATTTTGTACTATATGTTATTTTCTTGGTTAACTAAACGGTGGCCTTTTGTGTTATACTTGTAGAAAATTAACTCTATACAATCTTTCCTCTTTTTGAGGCTCCTCTGTGGTTCACATTAATTATAATGTTTAAACGAATCTAACCATTCCTTTTTCTCTTGTGAACTCTGTGCAGCCATTTGACTGGATCAAGAAGACGTTCTTCGAGAAGCCAGAAGAGGCATGAATTGTTATTTGTGAAGGCTCACCCCAGTTTTTGTTAATAAGTATCAGTTGATTGCCGCAAATGGGTAAACTGCAGAGTTCATTGGAATAACATGTTTTGTAATAGACTCTGTTTTGATTAAATTGAGTTCTTCAACTCTCTCTAACTTTGGAAATTTTATTGTCGAAATTTAAGGTACGTTTGATAAACATTTGATTTTGTATTTTTGGTTTTTGAAAACTAAACTTATAC CGGTTGATATGGTGGCTGGAACCGAATCCATTGTATAAAAACTTCCTAATTTTTGTATTAGGTTTGTCATTGGATTTGGAAGACGAATTGAGAGAAAAAAAATGGCAGGTGAATCGACTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAAGCCGCTGCCGGCTGGGGTATCGCCGCCGCCACTACTGCTCTGTGGGTCGTTCAGTTCATTATATATGGCTCCACTTCCTGCCGTCCTCATGATCACACTCTGGTTCCACATTGCTTTCCATCAAAACTCACAACTGATATCTTGGAACTCCTAGGATCTGGCATTCATTTTGCAGTGAACCATTTGACTGGATCAAGAAGACGTTCTTCGAGAAGCCAGAAGAGGCATGAATTGTTATTTGTGAAGGCTCACCCCAGTTTTTGTTAATAAGTATCAGTTGATTGCCGCAAATGGGTAAACTGCAGAGTTCATTGGAATAACATGTTTTGTAATAGACTCTGTTTTGATTAAATTGAGTTCTTCAACTCTCTCTAACTTTGGAAATTTTATTGTCGAAATTTAAGGTACGTTTGATAAACATTTGATTTTGTATTTTTGGTTTTTGAAAACTAAACTTATAC ATGGCAGGTGAATCGACTTTGTTCAAGTTCTTGAGCCCAGGACGCCGTTTCCAATCTACGGACATCCAAGCCGCTGCCGGCTGGGGTATCGCCGCCGCCACTACTGCTCTGTGGGTCGTTCAGTTCATTATATATGGCTCCACTTCCTGCCGTCCTCATGATCACACTCTGGTTCCACATTGCTTTCCATCAAAACTCACAACTGATATCTTGGAACTCCTAGGATCTGGCATTCATTTTGCAGTGAACCATTTGACTGGATCAAGAAGACGTTCTTCGAGAAGCCAGAAGAGGCATGAATTGTTATTTGTGAAGGCTCACCCCAGTTTTTGTTAA MAGESTLFKFLSPGRRFQSTDIQAAAGWGIAAATTALWVVQFIIYGSTSCRPHDHTLVPHCFPSKLTTDILELLGSGIHFAVNHLTGSRRRSSRSQKRHELLFVKAHPSFC Homology
BLAST of ClCG11G005640 vs. NCBI nr
Match: KAG7016049.1 (hypothetical protein SDJN02_21153 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 84.7 bits (208), Expect = 5.4e-13 Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of ClCG11G005640 vs. NCBI nr
Match: KAG6578485.1 (hypothetical protein SDJN03_22933, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.7 bits (208), Expect = 5.4e-13 Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of ClCG11G005640 vs. NCBI nr
Match: KGN45840.1 (hypothetical protein Csa_005761 [Cucumis sativus]) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12 Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of ClCG11G005640 vs. NCBI nr
Match: KAA0051979.1 (Ubiquinol-cytochrome c reductase complex 6.7 kDa [Cucumis melo var. makuwa] >TYK04578.1 Ubiquinol-cytochrome c reductase complex 6.7 kDa [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12 Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of ClCG11G005640 vs. NCBI nr
Match: KAF3433259.1 (hypothetical protein FNV43_RR24361 [Rhamnella rubrinervis]) HSP 1 Score: 65.9 bits (159), Expect = 2.6e-07 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy Swiss-Prot
Match: P48505 (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-08 Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy Swiss-Prot
Match: Q94K78 (Cytochrome b-c1 complex subunit 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRY PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy TrEMBL
Match: A0A0A0K7V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014600 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.8e-13 Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy TrEMBL
Match: A0A5D3BZX3 (Ubiquinol-cytochrome c reductase complex 6.7 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002150 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.9e-13 Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy TrEMBL
Match: A9PAG4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G059500 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy TrEMBL
Match: A0A3Q7FPE4 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of ClCG11G005640 vs. ExPASy TrEMBL
Match: A0A2P2J2E2 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of ClCG11G005640 vs. TAIR 10
Match: AT2G40765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 4.0e-06 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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