ClCG11G004760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G004760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr11: 5097076 .. 5097450 (+)
RNA-Seq Expression	ClCG11G004760
Synteny	ClCG11G004760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATACCACTTATTTCTCACTGGTTTTGGGCACTCACCTTCCTATGTTATGATTAGAGATGAGGTGTTTGGTGCTGAAGCGGAACGTTCCTTTCTAACGTTTTTATAATGATAACTATACATGTTATTTATGGTTAATATTTTGTTGTAGGCAATTATCATGTCGGACCTTGTGGCAACTGAGCAAGAGATTGTGTTCCTAGATCGCAGTGTGGAGCCACCTCAAGCACCACTATTACCATTGGCACCCCTTTTACCACCTACCGATGGTGCGAGCCTTCGGCAAATCACTCCTATGCGAGGATGGACAAAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAATATGAAGAAGAAGTTCATAAAGCCAATTAA

mRNA sequence

ATGTCATACCACTTATTTCTCACTGGTTTTGGGCACTCACCTTCCTATGTTATGATTAGAGATGAGGCAATTATCATGTCGGACCTTGTGGCAACTGAGCAAGAGATTGTGTTCCTAGATCGCAGTGTGGAGCCACCTCAAGCACCACTATTACCATTGGCACCCCTTTTACCACCTACCGATGGTGCGAGCCTTCGGCAAATCACTCCTATGCGAGGATGGACAAAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAATATGAAGAAGAAGTTCATAAAGCCAATTAA

Coding sequence (CDS)

ATGTCATACCACTTATTTCTCACTGGTTTTGGGCACTCACCTTCCTATGTTATGATTAGAGATGAGGCAATTATCATGTCGGACCTTGTGGCAACTGAGCAAGAGATTGTGTTCCTAGATCGCAGTGTGGAGCCACCTCAAGCACCACTATTACCATTGGCACCCCTTTTACCACCTACCGATGGTGCGAGCCTTCGGCAAATCACTCCTATGCGAGGATGGACAAAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAATATGAAGAAGAAGTTCATAAAGCCAATTAA

Protein sequence

MSYHLFLTGFGHSPSYVMIRDEAIIMSDLVATEQEIVFLDRSVEPPQAPLLPLAPLLPPTDGASLRQITPMRGWTKEEEEEEEEEEYEEEVHKAN

Homology

The following BLAST results are available for this feature:

BLAST of ClCG11G004760 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G004760 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G004760 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG11G004760 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G004760.1	ClCG11G004760.1	mRNA