ClCG11G002860 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G002860
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	zinc finger CCCH domain-containing protein 39-like
Location	CG_Chr11: 3027443 .. 3029275 (-)
RNA-Seq Expression	ClCG11G002860
Synteny	ClCG11G002860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAGGGTTTTGATTCTTCATTCAGTTTGTTTTTTCTTTTTAACCTCTTACTATAAATATGACTATAAGTCTTTCGTTTTCGCCATTGTTTTCATTCCTTCTTCCATTGATATCTATTCCGCTGTTTTGATTATTATTTCAAACACACCCTTTTGTTTCTTTGGCGAATTTGACTTCAATTTGTTGCGGTTTTCGATATTGATTGATTCCTCTACTTTTCTTCTTCTTCTGCCGTTTGATCACAACGATTGATCGAAATTTCTTTTGGGTGGCTTCATTATACGTTGTTCATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTATTTTAGAAGATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGACCCACAATCACAATTTGAGGTACAACAATCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATCCATCCTTGAATTCCAGGGTGCACCCGCCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCAAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCCCCACCAAATTGGCAAGAAATTGTTGGTATAAGGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGATGTAATTTTCTTCATGAAGATCCGGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATAAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCGAATGGAAATGCTAGGCCTTCATACTGGAAGACGAAGTTATGCACTAAGTGGGAGATTACAGGTCATTGCCCCTTTGGTGAAAAGTGCCATTTTGCTCATGGTCAATCTGGTATTGATAATTCTCTTATATAATTCTTTTATCTGAATGGAACCCAATATTTGGTTATAACATGTGAAATAGAATTCTGAATAGCCATTTGATGAAGTGGAAATCATGATATGCCTTGAATGATCTTCACTGTTAGTTAACACAACAATGTTCAGTTTGAATCATTTGTTACTTCATTTGTTTAGTATTTATGTTATGTACTCTATGAAGCTATTAACATTTGTGATTAATGATTATGCATACTACTTTGAGAGATGCTGACTGTTATTAATGAATTAGAGTTACAACTATCAATTGGACGGGAGGGGGAAGCATGTAGTTCTGCCCTGCCTTTAATTGTGGCCATGGAAGCAACTACAAGTTTGACAACCAGTGTTCCGTCCTCCGCCCTACTGGAGGGCCAGGCAAACCAGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGAGTTTTTCTTTTTGAGGTGAAGTCGTTTATTCTAGTTAGTTTTTGAAGTTGGTTTGCTGAGATGAGATTCAATTGATTAGTTTCAATATGGGAGTTGGGTTGGTGCTGGTTTTCTGAATTAGATGAAAGGAGTGTAAGAAAAGATTTTTGCTGAGAATTCATTGGGAATATGGATAGAAGAGAGAGTGA

mRNA sequence

GCTAGGGTTTTGATTCTTCATTCAGTTTGTTTTTTCTTTTTAACCTCTTACTATAAATATGACTATAAGTCTTTCGTTTTCGCCATTGTTTTCATTCCTTCTTCCATTGATATCTATTCCGCTGTTTTGATTATTATTTCAAACACACCCTTTTGTTTCTTTGGCGAATTTGACTTCAATTTGTTGCGGTTTTCGATATTGATTGATTCCTCTACTTTTCTTCTTCTTCTGCCGTTTGATCACAACGATTGATCGAAATTTCTTTTGGGTGGCTTCATTATACGTTGTTCATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTATTTTAGAAGATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGACCCACAATCACAATTTGAGGTACAACAATCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATCCATCCTTGAATTCCAGGGTGCACCCGCCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCAAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCCCCACCAAATTGGCAAGAAATTGTTGGTATAAGGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGATGTAATTTTCTTCATGAAGATCCGGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATAAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCGAATGGAAATGCTAGGCCTTCATACTGGAAGACGAAGTTATGCACTAAGTGGGAGATTACAGGTCATTGCCCCTTTGGTGAAAAGTGCCATTTTGCTCATGGTCAATCTGAGTTACAACTATCAATTGGACGGGAGGGGGAAGCATGTAGTTCTGCCCTGCCTTTAATTGTGGCCATGGAAGCAACTACAAGTTTGACAACCAGTGTTCCGTCCTCCGCCCTACTGGAGGGCCAGGCAAACCAGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGAGTTTTTCTTTTTGAGGTGAAGTCGTTTATTCTAGTTAGTTTTTGAAGTTGGTTTGCTGAGATGAGATTCAATTGATTAGTTTCAATATGGGAGTTGGGTTGGTGCTGGTTTTCTGAATTAGATGAAAGGAGTGTAAGAAAAGATTTTTGCTGAGAATTCATTGGGAATATGGATAGAAGAGAGAGTGA

Coding sequence (CDS)

ATGAGTTTCAATGATATTAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTGCTAATGGCGATGCGTCTGGTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGACCCACAATCACAATTTGAGGTACAACAATCTCCATTTAAAAGAGCTAGAAATTCTGAAGAAAACCAATCTAGCCCTATCCCTTATTCAAATCCATCCTTGAATTCCAGGGTGCACCCGCCAAATGCTCCAGTGAATAAAGGAATAAGCAATATCTTTTTTAAGACAAGGATGTGTGCAAAATTTAAGCTTGGTTTGTGTAGGAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGACATGAGACAACCCCCACCAAATTGGCAAGAAATTGTTGGTATAAGGGAGGATGATCAATCAGTAAGCAATTGGAATGATGATCAGAAGATAATCCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGGGAGGAATGCCCTTATGGAGATAGATGTAATTTTCTTCATGAAGATCCGGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAGAGTTCAGCTATAAGTATTGGAACCACAGGAACTCCATTGATAAATGGAAGTGATTCTAGTTATCCTGAACCTAGCAGGGCAACTTCTTGTTCTGTTTCTGATGCTCTTCGAGCGAATGGAAATGCTAGGCCTTCATACTGGAAGACGAAGTTATGCACTAAGTGGGAGATTACAGGTCATTGCCCCTTTGGTGAAAAGTGCCATTTTGCTCATGGTCAATCTGAGTTACAACTATCAATTGGACGGGAGGGGGAAGCATGTAGTTCTGCCCTGCCTTTAATTGTGGCCATGGAAGCAACTACAAGTTTGACAACCAGTGTTCCGTCCTCCGCCCTACTGGAGGGCCAGGCAAACCAGTGCTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGA

Protein sequence

MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKLCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSALPLIVAMEATTSLTTSVPSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG

Homology

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BLAST of ClCG11G002860 vs. NCBI nr
Match: XP_038890424.1 (zinc finger CCCH domain-containing protein 39 [Benincasa hispida])

HSP 1 Score: 661.8 bits (1706), Expect = 3.3e-186
Identity = 317/346 (91.62%), Postives = 329/346 (95.09%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYG-ANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEEN 60
           MSFND+RASV+ PPLHSYG ANGD SGCWSQFPRNDPFDP SQFEVQQ PFKRARNSEEN
Sbjct: 1   MSFNDMRASVLSPPLHSYGAANGDVSGCWSQFPRNDPFDPHSQFEVQQPPFKRARNSEEN 60

Query: 61  QSSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120
           QSSPIPYS+PSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM
Sbjct: 61  QSSPIPYSSPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120

Query: 121 RQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAK 180
           RQPPPNWQEIVGIREDDQSVSNWNDDQKIIQK+KLCRKFYNGEECPYGDRCNFLHEDPAK
Sbjct: 121 RQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKLKLCRKFYNGEECPYGDRCNFLHEDPAK 180

Query: 181 FRDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           FRDD GRFRESSAISIGTTGTPL+NGSDSSYPEPSRATS SVSDALRANGNARPS+WKTK
Sbjct: 181 FRDDLGRFRESSAISIGTTGTPLMNGSDSSYPEPSRATSSSVSDALRANGNARPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQLS+GREGEA S+AL   PLIV MEA++SL TSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLSLGREGEASSAALNVKPLIVTMEASSSLATSV 300

Query: 301 PSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           PSSALL+GQ   CLLKWKGPKKINRIYADWLDDLPLSPS TSKMEG
Sbjct: 301 PSSALLDGQVKPCLLKWKGPKKINRIYADWLDDLPLSPSPTSKMEG 346

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BLAST of ClCG11G002860 vs. NCBI nr
Match: XP_008457806.1 (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KAA0061589.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa] >TYJ97798.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 651.4 bits (1679), Expect = 4.4e-183
Identity = 316/347 (91.07%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSNPSLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EPSRATSCSVSDALRANGN RPS+WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGE  ++AL   PLIVAMEA++SLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 -PSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
            PSSAL EGQA   LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

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BLAST of ClCG11G002860 vs. NCBI nr
Match: XP_022946029.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata])

HSP 1 Score: 647.5 bits (1669), Expect = 6.4e-182
Identity = 309/345 (89.57%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY NP  NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKL 240
           RDDSGRFRESSAISIGTTGTPLINGSDSSYPEP +A S SV DALRANGN+RPS+WKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSVP 300
           CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGE  ++AL   PL+VAMEA +SL TSVP
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEAPSSLATSVP 300

Query: 301 SSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           SSAL EGQA Q LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 SSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 345

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BLAST of ClCG11G002860 vs. NCBI nr
Match: KAG6599412.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 644.0 bits (1660), Expect = 7.1e-181
Identity = 307/345 (88.99%), Postives = 322/345 (93.33%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 233 MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 292

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY NP  NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 293 SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 352

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 353 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 412

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKL 240
           RDDSGRFRESSAISIGTTGTPLINGSDSSYPEP +A S SV DALRANGN+RPS+WKTKL
Sbjct: 413 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 472

Query: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSVP 300
           CTKWEITGHCPFGEKCHFAHGQSELQL IGREGE  ++AL   PL+VAMEA +SL TSVP
Sbjct: 473 CTKWEITGHCPFGEKCHFAHGQSELQLFIGREGEVSNTALNVKPLVVAMEAPSSLATSVP 532

Query: 301 SSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           SSAL EGQA Q LLKWKGPKKINRIYADWLDDLPLSP+STS++EG
Sbjct: 533 SSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPNSTSQLEG 577

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BLAST of ClCG11G002860 vs. NCBI nr
Match: XP_004139420.1 (zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypothetical protein Csa_019214 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 7.1e-181
Identity = 312/347 (89.91%), Postives = 326/347 (93.95%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+RASVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSNPSLNSR  PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NG+D SSY EPSR TSCSVSDALRANGN RPS+WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTS- 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGE  ++AL   PLIVAMEA++SLTT+ 
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 VPSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           VPSSAL EGQ    LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

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BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-79
Identity = 166/340 (48.82%), Postives = 208/340 (61.18%), Query Frame = 0


Query: 40  QSQFEVQQSP-FKRARNSEENQSSPI------PYSNPSLNSRVHPPNAPVNKGISNIFFK 99
           QSQ   Q  P  KR R  ++N  +P         SNP +   ++PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVG------------IREDDQS-- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG             RE ++   
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKLCTKWEITGHCPF 279
           IS+G T     + + S+  E +R  S  V   +   G  +  YWKT+LC K++ITG CPF
Sbjct: 229 ISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPF 288

Query: 280 GEKCHFAHGQSELQLSIGR-EGEACSSALPL----------IVAMEATTSLTTSVPSSAL 339
           G+KCHFAHGQ+EL  S+GR EGEA ++   +            AM+  T +T    S   
Sbjct: 289 GDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTAD-SSGLN 348

Query: 340 LEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 342
            EG+  +CLLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

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BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.9e-46
Identity = 106/304 (34.87%), Postives = 151/304 (49.67%), Query Frame = 0


Query: 79  NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQS 138
           N   ++ I  +FFKT++C KF+ G C    +CNFAHG+E++R+PPPNWQEIV   E+   
Sbjct: 76  NTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEE--- 135

Query: 139 VSNWNDDQKI--------------------------IQKMKLCRKFYNGEECPYGDRCNF 198
            +   ++ +I                            K + C+KFY  E CPYGD C F
Sbjct: 136 ATEAREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTF 195

Query: 199 LHEDPAKFRDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANG-NA 258
           LH       D+  + RES AIS+    +P + G        S A + + + A   NG   
Sbjct: 196 LH-------DEQSKARESVAISL----SPSVGGGGGGGSYNSAAAAAASASAAAGNGPMQ 255

Query: 259 RPSYWKTKLCTKWEITGHCPFGEKCHFAHGQSELQLSIG-------REGEACSSALPLIV 318
           +PS WKT++C KWE+TG+CPFG KCHFAHG +EL    G       R+  A   +   +V
Sbjct: 256 KPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAVV 315

Query: 319 A----MEATTSLTTSVPSSALL---------------EGQANQCLLKWKGPKKINRIYAD 330
           +     E   + TT +P + +                 GQ  + + KWKGP KI+RIY D
Sbjct: 316 SAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYGD 365

[Close]

BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.5e-44
Identity = 121/372 (32.53%), Postives = 169/372 (45.43%), Query Frame = 0


Query: 18  YGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNPSLNSRVHP 77
           +    D +  W+  P N   D          P K+ R S  + S+    +  + ++R   
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSAT---TTSAASNR--- 95

Query: 78  PNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQ 137
                 K I  +FFKT++C KF+ G C    +CNFAH VE++R+PPPNWQEIV   E+++
Sbjct: 96  -----TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEER 155

Query: 138 SVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHE 197
           S         +++                      K + C+KFY  E CPYG+ C FLH 
Sbjct: 156 SGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH- 215

Query: 198 DPAKFRDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNA---- 257
                 D++ R RES AIS+G  G     G  S         S S    L   G +    
Sbjct: 216 ------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGS 275

Query: 258 -----RPSYWKTKLCTKWEITGHCPFGEKCHFAHGQSELQL-------SIGREGEACSSA 317
                +PS WKT++C KWEITG+CPFG KCHFAHG +EL           G++G + +  
Sbjct: 276 GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPD 335

Query: 318 LPLIV-----AMEATTSLTTSVP----------------SSALLEGQANQCLLKWKGPKK 331
               V       + TT L+  VP                SSA+ +    +   KWKGP K
Sbjct: 336 TKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAK 383

[Close]

BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-23
Identity = 90/342 (26.32%), Postives = 137/342 (40.06%), Query Frame = 0


Query: 6   IRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIP 65
           +R +  PPP + +  +GD+S   ++   +  +   S  +  +SP K+ R+S  ++     
Sbjct: 14  VRITHDPPPENCFPNSGDSSVWATEDDYSRVWAINS--DGAESPSKKTRSSSSSE----- 73

Query: 66  YSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLC-RNGASCNFAHGVEDMR---Q 125
                               I   FFKT++C KF+ G C  + +SC+FAH  E++R    
Sbjct: 74  --------------------IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPP 133

Query: 126 PPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFR 185
           PPPNWQE V                                                   
Sbjct: 134 PPPNWQETV--------------------------------------------------- 193

Query: 186 DDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKLC 245
            ++ R RES A+S+G  G                    +V+  L++        WKT++C
Sbjct: 194 TEASRNRESFAVSLGPRG--------------------NVAQTLKSPN------WKTRIC 251

Query: 246 TKWEITGHCPFGEKCHFAHGQSELQLSIGR--EGEA-CSSALPLIVAMEATTSLTTSVPS 305
            KW+ TG+CPFG  CHFAHG SEL    G   EGE    ++  L           TS+ S
Sbjct: 254 NKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVS 251

Query: 306 SALLEGQANQCLL----------KWKGPKKINRIYADWLDDL 331
             +   + +  +           KWKGP KI+R+Y DW+DD+
Sbjct: 314 PGVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.5e-11
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLINGSDSSY 210
           K+K C KF++   CP+G+ C+F H  P  ++            ++  T    +N  + + 
Sbjct: 39  KLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQ------------AVAKT----LNLGNPAV 98

Query: 211 PEPSRATSCSVSDALRANGNARP-SYWKTKLCTKWEITGHCPFGEKCHFAHGQSEL 266
           P P+RA          A GN+ P S  KT++CTK+     C FG+KCHFAHG+ EL
Sbjct: 99  PAPARAPMDHA-----AGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGEREL 133

[Close]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL
Match: A0A5A7V7E5 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00080 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.1e-183
Identity = 316/347 (91.07%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSNPSLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EPSRATSCSVSDALRANGN RPS+WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGE  ++AL   PLIVAMEA++SLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 -PSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
            PSSAL EGQA   LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL
Match: A0A1S3C7N3 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103497405 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.1e-183
Identity = 316/347 (91.07%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSNPSLNSR HPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EPSRATSCSVSDALRANGN RPS+WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGE  ++AL   PLIVAMEA++SLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 -PSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
            PSSAL EGQA   LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL
Match: A0A6J1G2M8 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111450240 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.1e-182
Identity = 309/345 (89.57%), Postives = 323/345 (93.62%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFEVQQ PFKRARN EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY NP  NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKL 240
           RDDSGRFRESSAISIGTTGTPLINGSDSSYPEP +A S SV DALRANGN+RPS+WKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSVP 300
           CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGE  ++AL   PL+VAMEA +SL TSVP
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEAPSSLATSVP 300

Query: 301 SSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           SSAL EGQA Q LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 SSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 345

[Close]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL
Match: A0A0A0LKX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.4e-181
Identity = 312/347 (89.91%), Postives = 326/347 (93.95%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+RASVIPPPLHSYG+NGDASGCWSQFPRNDPFDPQSQFEVQQ P+KRARNSEEN 
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPI YSNPSLNSR  PPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPSRATSCSVSDALRANGNARPSYWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NG+D SSY EPSR TSCSVSDALRANGN RPS+WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTS- 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGE  ++AL   PLIVAMEA++SLTT+ 
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 VPSSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           VPSSAL EGQ    LLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL
Match: A0A6J1KJ53 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111493694 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177
Identity = 303/345 (87.83%), Postives = 318/345 (92.17%), Query Frame = 0


Query: 1   MSFNDIRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQ 60
           MSFND+R SVIPPPLHSYGANGDASGCWSQ+PRND FDPQSQFE QQ PFKRAR  EENQ
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEAQQPPFKRARTFEENQ 60

Query: 61  SSPIPYSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+PY NP  NSRV PPNAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKL 240
           RDDSGRFRESSAISIGTTGTPL+NGSDSSYPEP +A S SV DALRANGN+RPS+WKTKL
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSYPEPIKAASSSVPDALRANGNSRPSFWKTKL 240

Query: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEACSSAL---PLIVAMEATTSLTTSVP 300
           CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGE  ++AL   PL+VAMEA     +SVP
Sbjct: 241 CTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEA----PSSVP 300

Query: 301 SSALLEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 343
           SSAL EGQA Q LLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 SSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 341

[Close]

BLAST of ClCG11G002860 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 298.1 bits (762), Expect = 8.9e-81
Identity = 166/340 (48.82%), Postives = 208/340 (61.18%), Query Frame = 0


Query: 40  QSQFEVQQSP-FKRARNSEENQSSPI------PYSNPSLNSRVHPPNAPVNKGISNIFFK 99
           QSQ   Q  P  KR R  ++N  +P         SNP +   ++PP  PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPP--PVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVG------------IREDDQS-- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG             RE ++   
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  +NW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKLCTKWEITGHCPF 279
           IS+G T     + + S+  E +R  S  V   +   G  +  YWKT+LC K++ITG CPF
Sbjct: 229 ISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPF 288

Query: 280 GEKCHFAHGQSELQLSIGR-EGEACSSALPL----------IVAMEATTSLTTSVPSSAL 339
           G+KCHFAHGQ+EL  S+GR EGEA ++   +            AM+  T +T    S   
Sbjct: 289 GDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTAD-SSGLN 348

Query: 340 LEGQANQCLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 342
            EG+  +CLLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of ClCG11G002860 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 179.1 bits (453), Expect = 6.0e-45
Identity = 121/372 (32.53%), Postives = 169/372 (45.43%), Query Frame = 0


Query: 18  YGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIPYSNPSLNSRVHP 77
           +    D +  W+  P N   D          P K+ R S  + S+    +  + ++R   
Sbjct: 36  WATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGSPSSSSAT---TTSAASNR--- 95

Query: 78  PNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQ 137
                 K I  +FFKT++C KF+ G C    +CNFAH VE++R+PPPNWQEIV   E+++
Sbjct: 96  -----TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNWQEIVAAHEEER 155

Query: 138 SVSNWNDDQKIIQ----------------------KMKLCRKFYNGEECPYGDRCNFLHE 197
           S         +++                      K + C+KFY  E CPYG+ C FLH 
Sbjct: 156 SGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLH- 215

Query: 198 DPAKFRDDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNA---- 257
                 D++ R RES AIS+G  G     G  S         S S    L   G +    
Sbjct: 216 ------DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGS 275

Query: 258 -----RPSYWKTKLCTKWEITGHCPFGEKCHFAHGQSELQL-------SIGREGEACSSA 317
                +PS WKT++C KWEITG+CPFG KCHFAHG +EL           G++G + +  
Sbjct: 276 GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPD 335

Query: 318 LPLIV-----AMEATTSLTTSVP----------------SSALLEGQANQCLLKWKGPKK 331
               V       + TT L+  VP                SSA+ +    +   KWKGP K
Sbjct: 336 TKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAK 383

[Close]

BLAST of ClCG11G002860 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 90/342 (26.32%), Postives = 137/342 (40.06%), Query Frame = 0


Query: 6   IRASVIPPPLHSYGANGDASGCWSQFPRNDPFDPQSQFEVQQSPFKRARNSEENQSSPIP 65
           +R +  PPP + +  +GD+S   ++   +  +   S  +  +SP K+ R+S  ++     
Sbjct: 14  VRITHDPPPENCFPNSGDSSVWATEDDYSRVWAINS--DGAESPSKKTRSSSSSE----- 73

Query: 66  YSNPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLC-RNGASCNFAHGVEDMR---Q 125
                               I   FFKT++C KF+ G C  + +SC+FAH  E++R    
Sbjct: 74  --------------------IGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPP 133

Query: 126 PPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFR 185
           PPPNWQE V                                                   
Sbjct: 134 PPPNWQETV--------------------------------------------------- 193

Query: 186 DDSGRFRESSAISIGTTGTPLINGSDSSYPEPSRATSCSVSDALRANGNARPSYWKTKLC 245
            ++ R RES A+S+G  G                    +V+  L++        WKT++C
Sbjct: 194 TEASRNRESFAVSLGPRG--------------------NVAQTLKSPN------WKTRIC 251

Query: 246 TKWEITGHCPFGEKCHFAHGQSELQLSIGR--EGEA-CSSALPLIVAMEATTSLTTSVPS 305
            KW+ TG+CPFG  CHFAHG SEL    G   EGE    ++  L           TS+ S
Sbjct: 254 NKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVS 251

Query: 306 SALLEGQANQCLL----------KWKGPKKINRIYADWLDDL 331
             +   + +  +           KWKGP KI+R+Y DW+DD+
Sbjct: 314 PGVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of ClCG11G002860 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05
Identity = 30/107 (28.04%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 92  KTRMCAKF-KLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQ 151
           KT +C K+ + G C  G  C FAHG++++R           IR                 
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV---------IRHPR-------------Y 283

Query: 152 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 198
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 284 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 308

[Close]

BLAST of ClCG11G002860 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05
Identity = 30/107 (28.04%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 92  KTRMCAKF-KLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIREDDQSVSNWNDDQKIIQ 151
           KT +C K+ + G C  G  C FAHG++++R           IR                 
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRPV---------IRHPR-------------Y 282

Query: 152 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 198
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 283 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 307

The following BLAST results are available for this feature:

BLAST of ClCG11G002860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890424.1	3.3e-186	91.62	zinc finger CCCH domain-containing protein 39 [Benincasa hispida]	[more]
XP_008457806.1	4.4e-183	91.07	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KA...	[more]
XP_022946029.1	6.4e-182	89.57	zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata]	[more]
KAG6599412.1	7.1e-181	88.99	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]
XP_004139420.1	7.1e-181	89.91	zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypo...	[more]

BLAST of ClCG11G002860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT81	1.3e-79	48.82	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	6.9e-46	34.87	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q9LQM3	8.5e-44	32.53	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5PP65	1.7e-23	26.32	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q7XPK1	5.5e-11	34.48	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of ClCG11G002860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7E5	2.1e-183	91.07	Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3C7N3	2.1e-183	91.07	zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1G2M8	3.1e-182	89.57	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662...	[more]
A0A0A0LKX6	3.4e-181	89.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1	[more]
A0A6J1KJ53	1.0e-177	87.83	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of ClCG11G002860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19360.1	8.9e-81	48.82	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	6.0e-45	32.53	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	1.2e-24	26.32	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	1.2e-05	28.04	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	1.2e-05	28.04	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 149..176 e-value: 4.1E-5 score: 33.0 coord: 90..116 e-value: 0.0021 score: 27.3 coord: 235..262 e-value: 1.1E-6 score: 38.2
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 236..262 e-value: 1.6E-10 score: 40.6 coord: 91..115 e-value: 3.5E-5 score: 23.6 coord: 150..174 e-value: 1.4E-7 score: 31.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 90..117 score: 13.797847
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 235..263 score: 15.807115
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 149..177 score: 15.403383
None	No IPR available	GENE3D	4.10.1000.10		coord: 85..121 e-value: 9.1E-10 score: 39.8 coord: 230..267 e-value: 5.8E-15 score: 56.4 coord: 149..178 e-value: 2.6E-7 score: 31.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..77
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 1..331
None	No IPR available	PANTHER	PTHR12547:SF121	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 1..331
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 149..176
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 89..121
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 234..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G002860.1	ClCG11G002860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding