Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAGTAAAGTGTGACACCATTTTTGTTTAATATAAATAATGTGTCTCACATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGTCTCTTTCTCTATTTTTCTCAAGATTTTTTTTTTTCTTTTTTTCCTTTTTTTGTGAAAGTTTCTTAGGAACCAAACATGTGTGATGTGGAAATTGAAGTGTGTTTTCATATATAATTCTTTTTTTTTTTTTTTTTTTTTTGTAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAATTTAGCAAGCCCAGATTACCATTCGATTATTAACGATTTTATTTTTACTTCTTTGTGTTTAAATGTTATATATATGTGTGTGTATGTATTTTTGAATCTTAACCAAATTTTAGAAATAAAGGGGTTAGTTTTCAAAATTTATTCTTTTTATTTCTATAAACTTTGGTTAAGATTTCAAACAAAGAATTGTTATGGGATGCCTTTGTAGAGATAAAAATAGGTAAGAAGTTTATTAGAAAATTGAAGGAATGGAAAAGAAAAGAAAAGGGAAAGGGCAATTCTGTCTTTTTACTTACTTTGTTTTAGTCTCCTAATAAATGAGTGGAATGGTTTACTTTTGTGCAGAAAAAAATAGTATTTGTTTGGACTCTTTTCCTTTGTAATTTATATACAACTTTATTGGCTTAATTAATATTGTTTATCTTATTCAATTCA
mRNA sequence
GAAAAAAGTAAAGTGTGACACCATTTTTGTTTAATATAAATAATGTGTCTCACATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAATTTAGCAAGCCCAGATTACCATTCGATTATTAACGATTTTATTTTTACTTCTTTGTGTTTAAATGTTATATATATGTGTGTGTATGTATTTTTGAATCTTAACCAAATTTTAGAAATAAAGGGGTTAGTTTTCAAAATTTATTCTTTTTATTTCTATAAACTTTGGTTAAGATTTCAAACAAAGAATTGTTATGGGATGCCTTTGTAGAGATAAAAATAGGTAAGAAGTTTATTAGAAAATTGAAGGAATGGAAAAGAAAAGAAAAGGGAAAGGGCAATTCTGTCTTTTTACTTACTTTGTTTTAGTCTCCTAATAAATGAGTGGAATGGTTTACTTTTGTGCAGAAAAAAATAGTATTTGTTTGGACTCTTTTCCTTTGTAATTTATATACAACTTTATTGGCTTAATTAATATTGTTTATCTTATTCAATTCA
Coding sequence (CDS)
ATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAA
Protein sequence
MDICCQSLSTIFPFPFPFPLCGDLLCLFPKKTWVSKFCSPSSCCFSFWLSPFSFLLLLLFPPQVTPFISLFHNYFNLFLLIFSNQFSCPPGILKSTAQDLVFQDVRDLEINDVDSLERLFEGRLILENNDYPGTGANNHHDPKSPARP
Homology
BLAST of ClCG10G015920 vs. NCBI nr
Match:
KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa])
HSP 1 Score: 100.1 bits (248), Expect = 1.6e-17
Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 0
Query: 78 FLLIFSNQFSCP-PGILKST------AQDLVFQDVRDLEINDVDSLERLFEGRLILENND 137
FLL S+ F+ P ILKST Q LV +DVRDLEI D DS ERLFEGRLILENND
Sbjct: 17 FLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGDSFERLFEGRLILENND 76
Query: 138 YPGTGANNHHDPKSPARP 149
YPGTGANNHHDPKSPARP
Sbjct: 77 YPGTGANNHHDPKSPARP 94
BLAST of ClCG10G015920 vs. NCBI nr
Match:
KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus])
HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16
Identity = 57/86 (66.28%), Postives = 61/86 (70.93%), Query Frame = 0
Query: 74 YFNLFL----LIFSNQFSCPP--GILKST-----AQDLVFQDVRDLEINDVDSLERLFEG 133
+F LFL L+ SN P ILKST Q LV QDVRD+EI D DS ERLFEG
Sbjct: 8 FFLLFLAFSFLLSSNSSLAVPTTRILKSTFDHPSYQALVHQDVRDMEIIDGDSFERLFEG 67
Query: 134 RLILENNDYPGTGANNHHDPKSPARP 149
RLILENNDYPGTGANNHHDPKSPA+P
Sbjct: 68 RLILENNDYPGTGANNHHDPKSPAKP 93
BLAST of ClCG10G015920 vs. NCBI nr
Match:
KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 79.0 bits (193), Expect = 3.9e-11
Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 0
Query: 81 IFSNQFSCPPGILKSTAQDLVFQDVRDLEINDVDSLERLFEGRLILENNDYPGTGANNHH 140
IF + F P +AQD VFQDVRDLE N D LF GRL+LENNDYPGTGANNHH
Sbjct: 33 IFKSTFDQP------SAQDFVFQDVRDLEFNGGD----LF-GRLVLENNDYPGTGANNHH 89
Query: 141 DPKSPARP 149
DP +PA+P
Sbjct: 93 DPNTPAKP 89
BLAST of ClCG10G015920 vs. NCBI nr
Match:
KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 77.8 bits (190), Expect = 8.8e-11
Identity = 52/102 (50.98%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 49 LSPFSFLLLLLFPPQVTPFISLFHNYFNLFLLIFSNQFSCPPGILKSTAQDLVFQDVRDL 108
L P +FLLL L F L + + + F P +AQ VFQD RDL
Sbjct: 6 LLPLTFLLLFL------AFAFLISSTAVPTTRVLQSNFDDP------SAQPSVFQDWRDL 65
Query: 109 EINDVDSL----ERLFEGRLILENNDYPGTGANNHHDPKSPA 147
EI+ DSL ERL EGR++LENNDYPGTGANNHHDPKSPA
Sbjct: 66 EISGEDSLEFVDERLSEGRVVLENNDYPGTGANNHHDPKSPA 95
BLAST of ClCG10G015920 vs. NCBI nr
Match:
KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 77.4 bits (189), Expect = 1.1e-10
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 81 IFSNQFSCPPGILKSTAQDLVFQDVRDLEINDVDSLERLFEGRLILENNDYPGTGANNHH 140
IF + F P +AQD VFQDVRDLE N D LF GR +LENNDYPGTGANNHH
Sbjct: 33 IFKSTFDQP------SAQDFVFQDVRDLEFNGGD----LF-GRFVLENNDYPGTGANNHH 89
Query: 141 DPKSPARP 149
DP +PA+P
Sbjct: 93 DPNTPAKP 89
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match:
A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 8.0e-18
Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 0
Query: 78 FLLIFSNQFSCP-PGILKST------AQDLVFQDVRDLEINDVDSLERLFEGRLILENND 137
FLL S+ F+ P ILKST Q LV +DVRDLEI D DS ERLFEGRLILENND
Sbjct: 17 FLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGDSFERLFEGRLILENND 76
Query: 138 YPGTGANNHHDPKSPARP 149
YPGTGANNHHDPKSPARP
Sbjct: 77 YPGTGANNHHDPKSPARP 94
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match:
A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 57/86 (66.28%), Postives = 61/86 (70.93%), Query Frame = 0
Query: 74 YFNLFL----LIFSNQFSCPP--GILKST-----AQDLVFQDVRDLEINDVDSLERLFEG 133
+F LFL L+ SN P ILKST Q LV QDVRD+EI D DS ERLFEG
Sbjct: 8 FFLLFLAFSFLLSSNSSLAVPTTRILKSTFDHPSYQALVHQDVRDMEIIDGDSFERLFEG 67
Query: 134 RLILENNDYPGTGANNHHDPKSPARP 149
RLILENNDYPGTGANNHHDPKSPA+P
Sbjct: 68 RLILENNDYPGTGANNHHDPKSPAKP 93
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match:
A0A5B6ZB32 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781 PE=4 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 9.8e-08
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 96 TAQDLVFQDVRDLEINDVDSLERLFEGRLILENNDYPGTGANNHHDPKSPAR 148
TAQDL Q V D+ + ER EGR+ +E+NDYPGTGANNHHDPK+P R
Sbjct: 76 TAQDLFAQSVMDMRTDGELLEERFIEGRMDIESNDYPGTGANNHHDPKTPGR 127
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match:
A0A5J4ZL62 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015769 PE=4 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 9.8e-08
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0
Query: 96 TAQDLVFQDVRDLEINDVDSLERLF-EGRLILENNDYPGTGANNHHDPKSPAR 148
TAQD + Q V D++ D + LER F EGR+ LE+NDYPGTGANNHHDPK+P R
Sbjct: 39 TAQDFLAQGVMDMK-TDGELLERQFIEGRMDLESNDYPGTGANNHHDPKTPGR 90
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match:
A0A2P2KYL1 (Uncharacterized protein MANES_09G136400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 95 STAQDLVFQDVRDLEINDVDSL----ERLFEGRLILENNDYPGTGANNHHDPKSPAR 148
S+AQD + QD DL ND D L E + EGR+ +E+ DYPGTGANNHHDP++P R
Sbjct: 39 SSAQDFLVQDAPDL--NDGDELTDVGEGISEGRMDMESTDYPGTGANNHHDPRTPGR 93
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0053852.1 | 1.6e-17 | 71.79 | hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa] | [more] |
| KGN59481.1 | 3.1e-16 | 66.28 | hypothetical protein Csa_001422 [Cucumis sativus] | [more] |
| KAG7017658.1 | 3.9e-11 | 63.24 | hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| KAG6596972.1 | 8.8e-11 | 50.98 | hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6580910.1 | 1.1e-10 | 61.76 | hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UDI6 | 8.0e-18 | 71.79 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0LHJ0 | 1.5e-16 | 66.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1 | [more] |
| A0A5B6ZB32 | 9.8e-08 | 59.62 | Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781... | [more] |
| A0A5J4ZL62 | 9.8e-08 | 64.15 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015769 PE=4 SV=1 | [more] |
| A0A2P2KYL1 | 1.4e-06 | 56.14 | Uncharacterized protein MANES_09G136400 OS=Rhizophora mucronata OX=61149 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
