ClCG10G015920 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAGTAAAGTGTGACACCATTTTTGTTTAATATAAATAATGTGTCTCACATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGTCTCTTTCTCTATTTTTCTCAAGATTTTTTTTTTTCTTTTTTTCCTTTTTTTGTGAAAGTTTCTTAGGAACCAAACATGTGTGATGTGGAAATTGAAGTGTGTTTTCATATATAATTCTTTTTTTTTTTTTTTTTTTTTTGTAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAATTTAGCAAGCCCAGATTACCATTCGATTATTAACGATTTTATTTTTACTTCTTTGTGTTTAAATGTTATATATATGTGTGTGTATGTATTTTTGAATCTTAACCAAATTTTAGAAATAAAGGGGTTAGTTTTCAAAATTTATTCTTTTTATTTCTATAAACTTTGGTTAAGATTTCAAACAAAGAATTGTTATGGGATGCCTTTGTAGAGATAAAAATAGGTAAGAAGTTTATTAGAAAATTGAAGGAATGGAAAAGAAAAGAAAAGGGAAAGGGCAATTCTGTCTTTTTACTTACTTTGTTTTAGTCTCCTAATAAATGAGTGGAATGGTTTACTTTTGTGCAGAAAAAAATAGTATTTGTTTGGACTCTTTTCCTTTGTAATTTATATACAACTTTATTGGCTTAATTAATATTGTTTATCTTATTCAATTCA GAAAAAAGTAAAGTGTGACACCATTTTTGTTTAATATAAATAATGTGTCTCACATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAATTTAGCAAGCCCAGATTACCATTCGATTATTAACGATTTTATTTTTACTTCTTTGTGTTTAAATGTTATATATATGTGTGTGTATGTATTTTTGAATCTTAACCAAATTTTAGAAATAAAGGGGTTAGTTTTCAAAATTTATTCTTTTTATTTCTATAAACTTTGGTTAAGATTTCAAACAAAGAATTGTTATGGGATGCCTTTGTAGAGATAAAAATAGGTAAGAAGTTTATTAGAAAATTGAAGGAATGGAAAAGAAAAGAAAAGGGAAAGGGCAATTCTGTCTTTTTACTTACTTTGTTTTAGTCTCCTAATAAATGAGTGGAATGGTTTACTTTTGTGCAGAAAAAAATAGTATTTGTTTGGACTCTTTTCCTTTGTAATTTATATACAACTTTATTGGCTTAATTAATATTGTTTATCTTATTCAATTCA ATGGATATTTGTTGCCAAAGCCTTAGTACCATCTTCCCCTTCCCCTTCCCCTTCCCCCTTTGTGGAGATCTATTGTGTTTGTTTCCCAAGAAAACATGGGTCTCAAAATTTTGCTCTCCTTCAAGTTGTTGCTTCTCTTTCTGGCTTTCTCCTTTCTCCTTTCTCCTTCTTCTGCTGTTCCCACCACAAGTAACCCCTTTCATTTCTCTCTTTCATAATTATTTCAATCTCTTTCTACTAATTTTCTCTAATCAATTTTCTTGCCCACCAGGAATCCTCAAATCAACTGCCCAAGATTTGGTTTTTCAGGATGTAAGAGATTTGGAGATAAATGATGTAGATTCACTGGAAAGATTGTTTGAAGGAAGATTGATTTTGGAGAACAATGATTATCCCGGGACAGGAGCAAACAATCACCATGATCCAAAGTCTCCTGCAAGACCATAA MDICCQSLSTIFPFPFPFPLCGDLLCLFPKKTWVSKFCSPSSCCFSFWLSPFSFLLLLLFPPQVTPFISLFHNYFNLFLLIFSNQFSCPPGILKSTAQDLVFQDVRDLEINDVDSLERLFEGRLILENNDYPGTGANNHHDPKSPARP Homology
BLAST of ClCG10G015920 vs. NCBI nr
Match: KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-17 Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of ClCG10G015920 vs. NCBI nr
Match: KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16 Identity = 57/86 (66.28%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of ClCG10G015920 vs. NCBI nr
Match: KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 79.0 bits (193), Expect = 3.9e-11 Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of ClCG10G015920 vs. NCBI nr
Match: KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 77.8 bits (190), Expect = 8.8e-11 Identity = 52/102 (50.98%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of ClCG10G015920 vs. NCBI nr
Match: KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-10 Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match: A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 8.0e-18 Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match: A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 57/86 (66.28%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match: A0A5B6ZB32 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.8e-08 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match: A0A5J4ZL62 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015769 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.8e-08 Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of ClCG10G015920 vs. ExPASy TrEMBL
Match: A0A2P2KYL1 (Uncharacterized protein MANES_09G136400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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