ClCG10G015370 (gene) Watermelon (Charleston Gray) v2.5

InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Position :
0
Zoom :
x 1
ATGGCTGCAGCTCTCTCCAGAACTCCAAGACGCCTGTTCCTCCCCTCCAGACTCCATTCTTTCACATATTCAACTACTCCACCGCTTCAACCAAACTCCGATTCCCCTTTCCCTTCATTTCGTGCTGCTAAATCCGCCATTTTGTCTCAATCAGATCCCGAAAAGCTTGCCCAATCCTTTATCCAAGCTTCCAACCTTCCCGCCTTCCGCCGCTACCGCCCAATCTACCACCATTCCATCCGCAAACTCGCCCGTGCTCAACGCTTCGACCTCATCGATGGCATCATTCAATCCCACCACAAATCCCCCTCCGCCATTTCTGAAGGCTTCTGGATCCGCCTCATCATGCTCTACTCTAGCGCCGGCATGGTCGATCAAGCGCTCCGCACTCTTGATCAGGTAATCCTTCACAAACCCTGCGATCTGTCAGAGAAATCGCTCTCTGCTGTTCTCTCTGTTTATCTCGACAATTCCATGCCCGAGAAGGTCCATGAGATGTTCAGATCCATTCCGGATAGGATTGGTGTTACTCCGACGGTGGTTTCCTACAATCTGGTATTGAAGGCTTTTGTTCAGCAAAACGATCTTCAATCGGCTCGGAATTGGATCGATGAGTTATACAAGGATGATGCTAAAGTCGTCCCTAACATTGACTCCTACAATATTTTGCTAGGAGCGTACTGGAACAATGAAGATCCGGTCGGATTTGATGGGATTGTCAAGGAAATTTCAAAGAGAGGTTTGGAATTCAATTTGGCTACTTACAATTACAGGATTTTGAGGCTGTGCAAGAACAAGGAGTGTGCTCGGGCCAAGAAAATGCTGGATGAGATGGTTTCAAAGGGTGTGAAACCCAATTCTCGTAGCTATGATGCAATCATCCATGGGTACTGCAATGTTGGGGATATTGAATCGGCTATGAAAGTTCTGAAGAGTATGCTGGAGGATGGCTATGTTTCTCCCACTTCCCGAAGCTATTATAGTTTGCTTCGAAGCATGGTTAAGGAGGGGGAGTTTGATTTGGCGTTGGAGACATGTAGAGAGATCATAAAGAGGAGATGGGTTCCTCCATTTGAGGCAATGGAGGTCCTGGTTCGTGGGTTGGTGGATATGTCGAGGGTTGAAGAGGCAAAAGAGGTTGTTGAGAAGATGAAGAAGAGGCTCAAAGGGCCTGCTGTGGATTCATGGGGAAAAATTGAAGCTGCTCTTTCTCTGTAG100200300400500600700800900100011001200Expect = 6.0E-7 / Score = 29.4Expect = 9.8E-6 / Score = 23.4Expect = 1.1E-7 / Score = 29.5Expect = 1.7E-4 / Score = 19.5Score = 9.021208Score = 10.544828Score = 11.750571Expect = 2.6E-31 / Score = 111.2Expect = 4.9E-19 / Score = 70.4Expect = 2.9E-11 / Score = 43.1Score = Score = Score = SequencePF13812PF01535TIGR00756PS51375PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10PF17177PTHR46128:SF264PTHR46128SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 173..229
e-value: 6.0E-7
score: 29.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 363..387
e-value: 0.17
score: 12.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 254..287
e-value: 9.8E-6
score: 23.4
coord: 325..356
e-value: 1.7E-4
score: 19.5
coord: 289..319
e-value: 1.1E-7
score: 29.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 9.021208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 251..285
score: 10.544828
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 11.750571
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 236..404
e-value: 2.6E-31
score: 111.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 83..233
e-value: 4.9E-19
score: 70.4
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 241..352
e-value: 2.9E-11
score: 43.1
NoneNo IPR availablePANTHERPTHR46128:SF264REPEAT 336, PUTATIVE-RELATEDcoord: 22..403
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 22..403
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 252..382