ClCG10G012500 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G012500
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S ribosomal protein L31
Location	CG_Chr10: 26486144 .. 26488394 (+)
RNA-Seq Expression	ClCG10G012500
Synteny	ClCG10G012500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCACCGTCGCCGTCGTTGGGTTTCCTAGGGTTTCATCTTCAGCCGCAGAGACGTTTGCAGGGCCGGGAGCAAAAATGGCGGATAAGTCGGCTAAGGCAAGAAAAAGTGAGGTCGTCACCAGGGAGTACACCATCAATCTCCACAAGCGCTTGCACGGATGGTAACTCTTTTCTTTTTTCTCTCAGATTTGCTGGTTTGGTTCTGGTGAAAAGTACACATGAAGATGTTTCAACTCAAGTTCACTTTTTGGGCTCCTTTATTTGGCTCGTCATGTTCTTAGTAGTGAATTTACCTGTAGGTTGTTTCATCAGCCTGATTTTTTTCCTTCTGTAATTTAATTTAATTTCAAAGTTTAACTCGACGGACCCCATTGTAATGTTCTTATATCTTCAGATATAAAAATGATATTTTTTAGTAACATACAAATTTTCTTATTTGATTATCTTTGAATTTAATCTTCTGTTGATGGGTTGTATCGTTTTAGTGACAAATTGTTGAAATTGCTGGCATTCGGGGGTGGAGTGTAATGCTCTTTTGTAGTTGTTACTTGTTAGTAACTAGTATTATATAGACTGTTGAGAGTGTACTTGCAAGTTAGGAAGTTATATATGAGTTGTGCTAGAAGAGTTTGGTGTCATTGGGGCATTGTTATTTTCTTTCTGTGATAGGAACAACTGATGCGATTACATGTTAATTGTTATTATTCCTTCTGCAAGGGCTTCTAGCCTACACATGGTTCTTATCTTTCATTAAGGCCTATATCTTCAATTTTATGCTCCTAGAAAAATATCTGTACAAGTAGCTCTGTCACTGTGCTCGTATTAATGTTCATTTGCTTGCTTCCTTGGAAGATATTTAACCACTGTGGGCTTGGCTTAGTGGTCAATAAGCTCCGTGAGAATAATAAAGGGTGAACGGGTTCAAGTCATGGTGACCGTCTTCCTAGTATTTAATATTCTATGAGTTTCTTTTGGCAACCAAATCTATTTTATGAGTCCCTTTTGGCAACCAAATGTAAGAGGGTTTATGTAGCTGTCTTGTGAGAATAGTTACGGGTCACACAAGCTAGCATGGACGCTCACAAGTATCAATAAAGAAAACAGAGATATTTGGAACTCTAGGAAACACGGACACCTGTCGAACATGGATATATCCGGACATGCTTCATACTTGACACCTCTGAAAAATGTGTCAGAATTATCATTTTTTTTCTTTTTTAATTTTAGACATGACTGGCAATGGTTCAAATCCTCTTGAAAATGTTTTACCTAAAATTTAGGGGGAAAATAGAGACTTTCTTATAGACTGAATCTTTATATATTGGTCAATCCTAAAGTATTAAGATAACATCTTTTCCTCTAGTCATATCCAACTAAACCTTCCTTTATCTTTTAAGATTTCAAATGTCGTTAATTGATGTAACTTTGTATGCTTTTAATGAAGTATATTTTGTTTTATATTAAATTTACATGTTTTATCTGTAGAAAAATATTTATATATTAATATATACACATTTTATTAAAACAAACGTGTCCCCAACATTTTCGTGTCGTGGATGTCCCCCCAAGGGGACCAATATGTTGTTATTAATCACAGTCTGATTTTCCAATTTAACCAGTTTCTAGTTAGAGCGATATCATTAATGGGCTTAGAACTAGTGACTAGATTTTGGAACTTGTAATCACATTCTAGATACTCTTCTGCAACACATTCAAGAAGAAAGCTCCTTTATTTCCCATCTTGTTAGATACCTTCCGTTTTCTTGAATGCTTTTAGTGGCTCTTTATTCTCGATATTCTTATGCAGCACATTCAAGAAGAAAGCACCGAAGGCCATCAAGGAACTCAGAAGGTTTGCTCAGAAGGCTATGGGTACCAGTGATGTTAGAGTAGACGTGAAACTTAACAAGAATATATGGAGTCGTGGAATTAGGAGTGTGCCTCGAAGGATTCGTGTTCGTATCGCACGGAAGCGAAATGACGAGGAAGATGCCAAGGAGGAGTTTTATTCCTTAATAACTGTTGCAGACGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAGATTAGCTTTGCCAAAACCGTCCCAAATTTTGGTATGTTCTTGGCTCACTAATCCATTTTTGACTTGTATCAAATTGTTTTTTTTGATAAGTTTACTTGTCTCAAAATTTTAGATGCACGTCATCAAGAAATTAAATTTTTTTTGACTTGCATTGCATCTGCT

mRNA sequence

CAGTCACCGTCGCCGTCGTTGGGTTTCCTAGGGTTTCATCTTCAGCCGCAGAGACGTTTGCAGGGCCGGGAGCAAAAATGGCGGATAAGTCGGCTAAGGCAAGAAAAAGTGAGGTCGTCACCAGGGAGTACACCATCAATCTCCACAAGCGCTTGCACGGATGCACATTCAAGAAGAAAGCACCGAAGGCCATCAAGGAACTCAGAAGGTTTGCTCAGAAGGCTATGGGTACCAGTGATGTTAGAGTAGACGTGAAACTTAACAAGAATATATGGAGTCGTGGAATTAGGAGTGTGCCTCGAAGGATTCGTGTTCGTATCGCACGGAAGCGAAATGACGAGGAAGATGCCAAGGAGGAGTTTTATTCCTTAATAACTGTTGCAGACGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAGATTAGCTTTGCCAAAACCGTCCCAAATTTTGGTATGTTCTTGGCTCACTAATCCATTTTTGACTTGTATCAAATTGTTTTTTTTGATAAGTTTACTTGTCTCAAAATTTTAGATGCACGTCATCAAGAAATTAAATTTTTTTTGACTTGCATTGCATCTGCT

Coding sequence (CDS)

ATGGCGGATAAGTCGGCTAAGGCAAGAAAAAGTGAGGTCGTCACCAGGGAGTACACCATCAATCTCCACAAGCGCTTGCACGGATGCACATTCAAGAAGAAAGCACCGAAGGCCATCAAGGAACTCAGAAGGTTTGCTCAGAAGGCTATGGGTACCAGTGATGTTAGAGTAGACGTGAAACTTAACAAGAATATATGGAGTCGTGGAATTAGGAGTGTGCCTCGAAGGATTCGTGTTCGTATCGCACGGAAGCGAAATGACGAGGAAGATGCCAAGGAGGAGTTTTATTCCTTAATAACTGTTGCAGACGTACCTGCAGAGGGATTGAAGGGCTTGGGTACCAAGGTCATTGATGAAGAGGACTAG

Protein sequence

MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED

Homology

[Close]

BLAST of ClCG10G012500 vs. NCBI nr
Match: XP_038903425.1 (60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 3.0e-57
Identity = 116/121 (95.87%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELR+FAQKAMGT+DVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNKNIWSRGIRSVPRR+RVRIARKRNDEEDAKEEFYSLITVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKNIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLITVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. NCBI nr
Match: XP_022152572.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 112/121 (92.56%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELR+FAQKAMGT+DVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRR+RVRIA+KRNDEEDAKEEFYSL+TVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. NCBI nr
Match: XP_023525745.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 3.1e-54
Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAPKAIKELR+FAQ AMGT+DVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPKAIKELRKFAQNAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRR+RVRIARKRNDEEDAKEEFYSL+TVA+VPAEG KGL TKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]

BLAST of ClCG10G012500 vs. NCBI nr
Match: XP_031401093.1 (60S ribosomal protein L31 [Punica granatum] >OWM78362.1 hypothetical protein CDL15_Pgr016086 [Punica granatum] >PKI31655.1 hypothetical protein CRG98_047939 [Punica granatum])

HSP 1 Score: 219.2 bits (557), Expect = 2.0e-53
Identity = 105/121 (86.78%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MAD+ +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MADRKSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK++WSRGIRSVPRR+RVR+ARKRNDEEDAKEEFYSL+TVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. NCBI nr
Match: XP_021281099.1 (60S ribosomal protein L31 [Herrania umbratica])

HSP 1 Score: 217.6 bits (553), Expect = 5.8e-53
Identity = 105/121 (86.78%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           M DK++K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MVDKASKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK +WSRGIRSVPRR+RVRIARKRNDEEDAKEEF+SL+TVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKQVWSRGIRSVPRRVRVRIARKRNDEEDAKEEFFSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-53
Identity = 103/121 (85.12%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MADK +K RK EVV+REYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRRIRVRIARKRND+EDAKEE YSL+TVA++P  GLKGLGT+VIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 100/121 (82.64%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           M+DK+ K RK EVVTREYTINLHKRLH CTFKKKAP AIKE+R+FAQKAMGT DVRVDVK
Sbjct: 1   MSDKT-KGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK IWSRGIRSVPRR+RVRIARKRND+EDAKEE YSL+TVA++PA+GLKGLGTK+I++E
Sbjct: 61  LNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDE 120

Query: 121 D 122
           D
Sbjct: 121 D 120

[Close]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-49
Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRRIRVR+ARKRND+EDAKEEF+SL+TVA++PAEGL GLGTKVI+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-49
Identity = 93/115 (80.87%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIW 66
           K RK EVVTREYTINLH+RLH CTFKKKAPKAIKE+R+FA+K MGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRRIRVR+ARKRND+EDAKEEF+SL+TVA++PAEGL GLGTK+I+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.3e-49
Identity = 95/118 (80.51%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 4   KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNK 63
           +  K RK EVVTREYTINLHKRLHGCTFKKKAP AIKE+R+FAQKAMGT DVRVDVKLNK
Sbjct: 3   EKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNK 62

Query: 64  NIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
            IWSRGIRSVPRR+RVRIARKRND+EDAKEE YSL+TVA +PA  LKGLG ++I+E+D
Sbjct: 63  QIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL
Match: A0A6J1DGM1 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 7.9e-56
Identity = 112/121 (92.56%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MADKSAKARKSEVVTREYT+NLHKRLHGCTFKKKAP AIKELR+FAQKAMGT+DVRVDVK
Sbjct: 1   MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRR+RVRIA+KRNDEEDAKEEFYSL+TVA+VPAEGLKGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL
Match: A0A218X1Y2 (60S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 9.6e-54
Identity = 105/121 (86.78%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           MAD+ +K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MADRKSKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK++WSRGIRSVPRR+RVR+ARKRNDEEDAKEEFYSL+TVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKHVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL
Match: A0A6J1A352 (60S ribosomal protein L31 OS=Herrania umbratica OX=108875 GN=LOC110414308 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53
Identity = 105/121 (86.78%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           M DK++K RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MVDKASKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK +WSRGIRSVPRR+RVRIARKRNDEEDAKEEF+SL+TVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKQVWSRGIRSVPRRVRVRIARKRNDEEDAKEEFFSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL
Match: I3NMM3 (60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53
Identity = 106/121 (87.60%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           M +K+AK RK EVVTREYTINLHKRLHGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MVEKAAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK+IWSRGIRSVPRR+RVRIARKRNDEEDAKEEFYSL+TV +VP+EG KGLGTKVIDEE
Sbjct: 61  LNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL
Match: A0A061DVL1 (Ribosomal protein L31e family protein OS=Theobroma cacao OX=3641 GN=TCM_005910 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MADKSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVK 60
           M DK++K RK EVVTREYTINLHKR HGCTFKKKAPKAIKE+R+FAQKAMGT+DVRVDVK
Sbjct: 1   MVDKASKGRKEEVVTREYTINLHKRSHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60

Query: 61  LNKNIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEE 120
           LNK +WSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSL+TVA++P EGLKGLGTKVIDEE
Sbjct: 61  LNKQVWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of ClCG10G012500 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 197.2 bits (500), Expect = 7.6e-51
Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRRIRVR+ARKRND+EDAKEEF+SL+TVA++PAEGL GLGTKVI+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of ClCG10G012500 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-50
Identity = 93/115 (80.87%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIW 66
           K RK EVVTREYTINLH+RLH CTFKKKAPKAIKE+R+FA+K MGT DVRVDVKLNK IW
Sbjct: 5   KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64

Query: 67  SRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
           S+GIR  PRRIRVR+ARKRND+EDAKEEF+SL+TVA++PAEGL GLGTK+I+EED
Sbjct: 65  SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of ClCG10G012500 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-49
Identity = 93/118 (78.81%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 4   KSAKARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNK 63
           +  K RK EVVTREYTINLH+RLH CTFKKKAP AIKE+R+FA KAMGT DVRVDVKLNK
Sbjct: 2   EKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNK 61

Query: 64  NIWSRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
            IWS+GIR  PRRIRVR+ARKRND+EDAKEEF+SL+TVA++PAEGL GLGTKVI+EE+
Sbjct: 62  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of ClCG10G012500 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 124.4 bits (311), Expect = 6.2e-29
Identity = 66/115 (57.39%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 7   KARKSEVVTREYTINLHKRLHGCTFKKKAPKAIKELRRFAQKAMGTSDVRVDVKLNKNIW 66
           K RK EV+TREYTINLH+RLH CTFKKKAPKAIKE+R+FA+KAMGT DVRVD        
Sbjct: 5   KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD-------- 64

Query: 67  SRGIRSVPRRIRVRIARKRNDEEDAKEEFYSLITVADVPAEGLKGLGTKVIDEED 122
                                     EEF+SL+TVA++PAEGL GLGTKVI+EED
Sbjct: 65  --------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of ClCG10G012500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903425.1	3.0e-57	95.87	60S ribosomal protein L31 [Benincasa hispida]	[more]
XP_022152572.1	1.6e-55	92.56	60S ribosomal protein L31 [Momordica charantia]	[more]
XP_023525745.1	3.1e-54	90.91	60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]	[more]
XP_031401093.1	2.0e-53	86.78	60S ribosomal protein L31 [Punica granatum] >OWM78362.1 hypothetical protein CDL...	[more]
XP_021281099.1	5.8e-53	86.78	60S ribosomal protein L31 [Herrania umbratica]	[more]

BLAST of ClCG10G012500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M573	1.2e-53	85.12	60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1	[more]
P46290	1.1e-51	82.64	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
P51420	1.1e-49	81.74	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
Q9STR1	2.4e-49	80.87	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]
Q9MAV7	5.3e-49	80.51	60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1	[more]

BLAST of ClCG10G012500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGM1	7.9e-56	92.56	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111020269 PE=3 SV...	[more]
A0A218X1Y2	9.6e-54	86.78	60S ribosomal protein L31 OS=Punica granatum OX=22663 GN=LOC116211037 PE=3 SV=1	[more]
A0A6J1A352	2.8e-53	86.78	60S ribosomal protein L31 OS=Herrania umbratica OX=108875 GN=LOC110414308 PE=3 S...	[more]
I3NMM3	2.8e-53	87.60	60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1	[more]
A0A061DVL1	3.7e-53	87.60	Ribosomal protein L31e family protein OS=Theobroma cacao OX=3641 GN=TCM_005910 P...	[more]

BLAST of ClCG10G012500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	7.6e-51	81.74	Ribosomal protein L31e family protein	[more]
AT4G26230.1	1.7e-50	80.87	Ribosomal protein L31e family protein	[more]
AT2G19740.1	1.1e-49	78.81	Ribosomal protein L31e family protein	[more]
AT5G56710.2	6.2e-29	57.39	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 11..94 e-value: 2.8E-48 score: 176.4
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 12..93 e-value: 1.2E-41 score: 140.8
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 1..121
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 10..93 e-value: 2.15641E-32 score: 107.27
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 8..121 e-value: 1.9E-48 score: 165.0
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 12..93
None	No IPR available	PANTHER	PTHR10956:SF40	60S RIBOSOMAL PROTEIN L31	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G012500.1	ClCG10G012500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome