ClCG10G011020 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGTTTTTTAAAATCCCTCTCTTTTTTCTCTCGCCCTTTTTTTCACTTCCTTTTAATTAAATTATATATATTTTTTTAAAATTGCTATGAAATTGTACTTTAATTAACGTGGTGTGTGATCGGACAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAA ATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAA ATGATGCCTATATCTTTCTCCAGCGTCAAGATTCTGTCCACTCTCTTCAGGCGTGGATACACGGCGGCGCCAGAAGGAGTTGCGGCCAGAATTGGCGTTATGATGAAGAAGGAAGAATCCGTAAGAAGTACAGAGAAGGTGTCGTGGGTTCCAGACCCCGTCACCGGTTATTACCGACCGGAGAACTGCACCGCCGAGATCGATGCTGCCGATCTCCGGACAATGCTACTGAACCCAACAGCAAAGTAA MMPISFSSVKILSTLFRRGYTAAPEGVAARIGVMMKKEESVRSTEKVSWVPDPVTGYYRPENCTAEIDAADLRTMLLNPTAK Homology
BLAST of ClCG10G011020 vs. NCBI nr
Match: KAA0044385.1 (protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa]) HSP 1 Score: 113.6 bits (283), Expect = 8.0e-22 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of ClCG10G011020 vs. NCBI nr
Match: XP_011652940.1 (late embryogenesis abundant protein Lea5-A [Cucumis sativus] >KGN52818.1 hypothetical protein Csa_015124 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 1.4e-21 Identity = 58/85 (68.24%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of ClCG10G011020 vs. NCBI nr
Match: XP_008454329.1 (PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucumis melo] >TYK29513.1 SENESCENCE-ASSOCIATED GENE 21 protein [Cucumis melo var. makuwa]) HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19 Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of ClCG10G011020 vs. NCBI nr
Match: XP_022949199.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata] >KAG6606956.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18 Identity = 59/91 (64.84%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of ClCG10G011020 vs. NCBI nr
Match: XP_023525742.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 98.2 bits (243), Expect = 3.5e-17 Identity = 58/97 (59.79%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-12 Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.0e-11 Identity = 41/78 (52.56%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11 Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11 Identity = 47/99 (47.47%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-11 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy TrEMBL
Match: A0A5A7TSN1 (Protein SENESCENCE-ASSOCIATED protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001130 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy TrEMBL
Match: A0A0A0KTB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001850 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.6e-22 Identity = 58/85 (68.24%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy TrEMBL
Match: A0A5D3E0D0 (SENESCENCE-ASSOCIATED GENE 21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001150 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20 Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy TrEMBL
Match: A0A1S3BZK3 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494763 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20 Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of ClCG10G011020 vs. ExPASy TrEMBL
Match: A0A6J1GC45 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452622 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.9e-19 Identity = 59/91 (64.84%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of ClCG10G011020 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 ) HSP 1 Score: 72.4 bits (176), Expect = 1.9e-13 Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of ClCG10G011020 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of ClCG10G011020 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 ) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-11 Identity = 37/70 (52.86%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of ClCG10G011020 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 ) HSP 1 Score: 58.2 bits (139), Expect = 3.7e-09 Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of ClCG10G011020 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 24/63 (38.10%), Postives = 35/63 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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