Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTGAAATGGATTCTCAATTCTGCCTTTACTCAAGTTCTCGGCCTCACGGAGAAGCAACACAATCAGAAGGAGGTAGCAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATAGAAGTTTGAATTTCGAAAGTGGGTTTCAAATGCCACTCCATTATCCCAGGTACACGAAGGGGGACTATGAGAAAATGGAGGAAGGTAAGTTGGATTTGCTTCTCAAACAATATGGACTCTGTTTTGATGGTACCCTTGAGGAGAAAAGGGCATTTGCTATTGGGACCTTCTTGTGGCCTGACCAACTTTGAATCCACCCACCAACTGTTTGATGAAATTCCTCTATGAAAAAAATGGCTCAGTTTTTTTTAAGCTTGGTGTTTGTATAGCTAGGTTCTGATGTGATGTTAGTTTAAGATGCAGAGATATTAGTAGCTGTGTCGTTTTTTTGACAAAGCTTTTGTTCGACTGTATCTGCTGATCTTGATGGGGTTTTAGTGAGTTTTGTAAAAACCTCGTCACATATAATGGTATATTAAACACCCTTTCTAATGACTCCATTACTTTCCCCTTTTCTTGGCTTTTTCATCTATCCTTTTACTTTCTTTCTTGCTTTAAATAATTTTGCTTCACAAAAAAAAAGGTACAATCTAGTAAAAGCAACAAGGAGAAACTATTGCATTCATATATTGATTGATCATTCATAGTCTCTACATATAATCTTATTGAAAACTCTCACATAACCGTACAGCATCTCTGATTGTTATTATCTTGGTTGGCCTCAAAGGGATTATCCTGATGCGGCGGCCATCCCGGCCATATCACAGGCCATGGGACAGGTTGGGGCTGCGGTTGTGGCAGCATTAATTGCCAAGGATATGGCTGCGGCCGCGGCAGGTTGGGGTAAGTTCTGTCAAACCAATGAGATTGTTCAGGGAAGCTCTGGTAAGAATGTGGATATGAAAGTTGATTAGTGGGATCATCTCCATAAGGGTAATATCTTCTATCTCCAGCTTCACCATCAAATCTTATACTTTTCACCTCTGCATGTTTGCCTGACTTTTCAATCACTTTTAAGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGATCCATCCTCTGAATCCATTGTGATTGTGTAAATACCTAATCAAAAAAACAAGAGGGGAATAAGAAACAGAGGGAAATAGAAGAAATAGAGAAGGAGAGAAAATATATAAACCATAGATGTTTTGTAGAATTTCTTGGACTTTTGCTTTGCATGCTTCACATTGAACACTTGCATTAAGAACACAACTCTGCAACAAAGTGAAAATGTTTAGTTAGCTTTAAAAGAAAAGAAAAAGGGAAAGAAAAGGAAAAAGTGTCTGCTTTTGGAGTGAAACCATTTCTGCAACAGAGTAATCCATTGATTTCATCTATGTAGATCGTTGAAATGGCTGGTTGAGTTTGAGGTTCTTTCTGGGAGAAGAAATGGGAAGAAATGGGGTTCTTCTAATTCTGTTTCGCAGCTCTTTGATGAAGAAGAGAGCAATCAAGGGGGGAAATAA
mRNA sequence
ATGGGGTTGAAATGGATTCTCAATTCTGCCTTTACTCAAGTTCTCGGCCTCACGGAGAAGCAACACAATCAGAAGGAGGTAGCAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATAGAAGTTTGAATTTCGAAAGTGGGTTTCAAATGCCACTCCATTATCCCAGCATCTCTGATTGTTATTATCTTGGTTGGCCTCAAAGGGATTATCCTGATGCGGCGGCCATCCCGGCCATATCACAGGCCATGGGACAGGTTGGGGCTGCGGTTGTGGCAGCATTAATTGCCAAGGATATGGCTGCGGCCGCGGCAGGTTGGGCTTCACCATCAAATCTTATACTTTTCACCTCTGCATGTTTGCCTGACTTTTCAATCACTTTTAAGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGATCCATCCTCTGAATCCATTGTGATTGTATCGTTGAAATGGCTGGTTGAGTTTGAGGTTCTTTCTGGGAGAAGAAATGGGAAGAAATGGGGTTCTTCTAATTCTGTTTCGCAGCTCTTTGATGAAGAAGAGAGCAATCAAGGGGGGAAATAA
Coding sequence (CDS)
ATGGGGTTGAAATGGATTCTCAATTCTGCCTTTACTCAAGTTCTCGGCCTCACGGAGAAGCAACACAATCAGAAGGAGGTAGCAGAAGGAATCAAGAACGTGGAGCAAGTGAAGGAGGCGGAAGATTGTTTTTATAGAAGTTTGAATTTCGAAAGTGGGTTTCAAATGCCACTCCATTATCCCAGCATCTCTGATTGTTATTATCTTGGTTGGCCTCAAAGGGATTATCCTGATGCGGCGGCCATCCCGGCCATATCACAGGCCATGGGACAGGTTGGGGCTGCGGTTGTGGCAGCATTAATTGCCAAGGATATGGCTGCGGCCGCGGCAGGTTGGGCTTCACCATCAAATCTTATACTTTTCACCTCTGCATGTTTGCCTGACTTTTCAATCACTTTTAAGAATGTTCTTGGATTCACTCTTCCACAGATTCTGACTGATCCATCCTCTGAATCCATTGTGATTGTATCGTTGAAATGGCTGGTTGAGTTTGAGGTTCTTTCTGGGAGAAGAAATGGGAAGAAATGGGGTTCTTCTAATTCTGTTTCGCAGCTCTTTGATGAAGAAGAGAGCAATCAAGGGGGGAAATAA
Protein sequence
MGLKWILNSAFTQVLGLTEKQHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLHYPSISDCYYLGWPQRDYPDAAAIPAISQAMGQVGAAVVAALIAKDMAAAAAGWASPSNLILFTSACLPDFSITFKNVLGFTLPQILTDPSSESIVIVSLKWLVEFEVLSGRRNGKKWGSSNSVSQLFDEEESNQGGK
Homology
BLAST of ClCG10G004220 vs. NCBI nr
Match:
KAG7015590.1 (hypothetical protein SDJN02_23226, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 124.8 bits (312), Expect = 8.3e-25
Identity = 83/161 (51.55%), Postives = 94/161 (58.39%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEK QHNQ E EGIKNVEQVKE+EDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGIKNVEQVKESEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYYLGWPQRDYPDAAAIPAISQAMGQVGAAVVAALIAKDMAAAAAGWASPSNLI 120
YP + + DY + + + Q G A + G +
Sbjct: 61 YPR--------YTKADY-EKMEDGKLDLLLKQYGLRFEGAGLPGGPPGPIIGHGTGCGCG 120
Query: 121 LFTSAC----LPDFSITFKNVLGFTLPQILTDPSSESIVIV 157
+ C + NVLGFTLPQILTDPSSESIV+V
Sbjct: 121 CGSMNCQGYGCGGSGGCWGNVLGFTLPQILTDPSSESIVMV 152
BLAST of ClCG10G004220 vs. NCBI nr
Match:
KAG6577527.1 (hypothetical protein SDJN03_25101, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 117.1 bits (292), Expect = 1.7e-22
Identity = 59/77 (76.62%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEK QHNQ E EGIKNVEQVKE+EDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGIKNVEQVKESEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYYLGWPQRDY 77
YP + WP R Y
Sbjct: 61 YPR---GWITRWPARPY 74
BLAST of ClCG10G004220 vs. NCBI nr
Match:
XP_022965232.1 (uncharacterized protein LOC111465146 [Cucurbita maxima])
HSP 1 Score: 116.3 bits (290), Expect = 2.9e-22
Identity = 57/69 (82.61%), Postives = 58/69 (84.06%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEKQH-NQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEKQH NQ E EGIKNVEQVKEAEDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYY 69
YP + Y
Sbjct: 61 YPRYTKADY 69
BLAST of ClCG10G004220 vs. NCBI nr
Match:
XP_022932392.1 (uncharacterized protein LOC111438758 [Cucurbita moschata])
HSP 1 Score: 113.2 bits (282), Expect = 2.5e-21
Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEK QHNQ E EG KNVEQVKE+EDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGTKNVEQVKESEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYY 69
YP + Y
Sbjct: 61 YPRYTKADY 69
BLAST of ClCG10G004220 vs. NCBI nr
Match:
XP_038904207.1 (uncharacterized protein LOC120090553 [Benincasa hispida])
HSP 1 Score: 113.2 bits (282), Expect = 2.5e-21
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLT+K QHNQKE EGI+NVEQVKEA+DCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTDKQQHNQKEAGEGIENVEQVKEAQDCFYGGLNFESGFQMPLH 60
Query: 61 YP 62
YP
Sbjct: 61 YP 62
BLAST of ClCG10G004220 vs. ExPASy TrEMBL
Match:
A0A6J1HJS9 (uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.4e-22
Identity = 57/69 (82.61%), Postives = 58/69 (84.06%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEKQH-NQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEKQH NQ E EGIKNVEQVKEAEDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQHRNQNEAGEGIKNVEQVKEAEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYY 69
YP + Y
Sbjct: 61 YPRYTKADY 69
BLAST of ClCG10G004220 vs. ExPASy TrEMBL
Match:
A0A6J1EWJ7 (uncharacterized protein LOC111438758 OS=Cucurbita moschata OX=3662 GN=LOC111438758 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 1.2e-21
Identity = 55/69 (79.71%), Postives = 57/69 (82.61%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEVAEGIKNVEQVKEAEDCFYRSLNFESGFQMPLH 60
MGLKWILNSAFTQVLGLTEK QHNQ E EG KNVEQVKE+EDCFY LNFESGFQMPLH
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQHNQNEAGEGTKNVEQVKESEDCFYGGLNFESGFQMPLH 60
Query: 61 YPSISDCYY 69
YP + Y
Sbjct: 61 YPRYTKADY 69
BLAST of ClCG10G004220 vs. ExPASy TrEMBL
Match:
A0A5D3CPN0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00090 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.8e-18
Identity = 57/81 (70.37%), Postives = 60/81 (74.07%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEV-AEGIKNVEQVKEAEDCFY-RSLNFESGFQMP 60
MGLKWILNSAFTQVLGLTEK Q NQKE EGIKNVEQVKE DCFY LNFESGFQMP
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60
Query: 61 LHYPSISDCYYLGWPQRDYPD 79
LHYP + +RDY +
Sbjct: 61 LHYPR--------YTKRDYEE 73
BLAST of ClCG10G004220 vs. ExPASy TrEMBL
Match:
A0A1S3BM13 (uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.8e-18
Identity = 57/81 (70.37%), Postives = 60/81 (74.07%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEV-AEGIKNVEQVKEAEDCFY-RSLNFESGFQMP 60
MGLKWILNSAFTQVLGLTEK Q NQKE EGIKNVEQVKE DCFY LNFESGFQMP
Sbjct: 1 MGLKWILNSAFTQVLGLTEKLQQNQKEAGGEGIKNVEQVKEGRDCFYGGGLNFESGFQMP 60
Query: 61 LHYPSISDCYYLGWPQRDYPD 79
LHYP + +RDY +
Sbjct: 61 LHYPR--------YTKRDYEE 73
BLAST of ClCG10G004220 vs. ExPASy TrEMBL
Match:
A0A0A0L4U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 6.2e-18
Identity = 56/81 (69.14%), Postives = 60/81 (74.07%), Query Frame = 0
Query: 1 MGLKWILNSAFTQVLGLTEK-QHNQKEV-AEGIKNVEQVKEAEDCFY-RSLNFESGFQMP 60
MGLKWILNSAFTQVLGLTEK Q NQKE EGIKNVEQVKE DCFY LNF+SGFQMP
Sbjct: 1 MGLKWILNSAFTQVLGLTEKQQQNQKEAGGEGIKNVEQVKEGRDCFYGGDLNFQSGFQMP 60
Query: 61 LHYPSISDCYYLGWPQRDYPD 79
LHYP + +RDY +
Sbjct: 61 LHYPR--------YTKRDYEE 73
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7015590.1 | 8.3e-25 | 51.55 | hypothetical protein SDJN02_23226, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6577527.1 | 1.7e-22 | 76.62 | hypothetical protein SDJN03_25101, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022965232.1 | 2.9e-22 | 82.61 | uncharacterized protein LOC111465146 [Cucurbita maxima] | [more] |
| XP_022932392.1 | 2.5e-21 | 79.71 | uncharacterized protein LOC111438758 [Cucurbita moschata] | [more] |
| XP_038904207.1 | 2.5e-21 | 87.10 | uncharacterized protein LOC120090553 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1HJS9 | 1.4e-22 | 82.61 | uncharacterized protein LOC111465146 OS=Cucurbita maxima OX=3661 GN=LOC111465146... | [more] |
| A0A6J1EWJ7 | 1.2e-21 | 79.71 | uncharacterized protein LOC111438758 OS=Cucurbita moschata OX=3662 GN=LOC1114387... | [more] |
| A0A5D3CPN0 | 2.8e-18 | 70.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3BM13 | 2.8e-18 | 70.37 | uncharacterized protein LOC103491021 OS=Cucumis melo OX=3656 GN=LOC103491021 PE=... | [more] |
| A0A0A0L4U1 | 6.2e-18 | 69.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047750 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
