ClCG10G002610 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G002610
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr10: 2980372 .. 2982150 (-)
RNA-Seq Expression	ClCG10G002610
Synteny	ClCG10G002610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

mRNA sequence

ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

Coding sequence (CDS)

ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

Protein sequence

MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMALAELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN

Homology

[Close]

BLAST of ClCG10G002610 vs. NCBI nr
Match: XP_038905285.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispida])

HSP 1 Score: 1054.3 bits (2725), Expect = 3.9e-304
Identity = 523/598 (87.46%), Postives = 552/598 (92.31%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQRPFS+K LLYLQTQN LLQKS TTI+IH   NFQPCFSID QAPWT+ R AL      
Sbjct: 1   MQRPFSSKLLLYLQTQNPLLQKSVTTISIHDASNFQPCFSIDYQAPWTSLRTALAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELAL +AFQALKCNPNGY LVQLVRAC SHAW SCGHQLH YILRSGFASNVFVGTAMV
Sbjct: 61  AELALTKAFQALKCNPNGYVLVQLVRACTSHAWDSCGHQLHCYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+P+LVSWNSLISG+VHCG FRKALSLFIQLDGSENLVDSY
Sbjct: 121 NFYIKSESFDSAHKVFDEMPQPSLVSWNSLISGFVHCGQFRKALSLFIQLDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLSTALSASSQLGWL LGQSIHSKV+KLG+ +NTIVANCLIDMYGKC+SFEEAVKVFN++
Sbjct: 181 SLSTALSASSQLGWLKLGQSIHSKVVKLGVADNTIVANCLIDMYGKCESFEEAVKVFNEI 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKD ISWNSVIAASA+NGRLEQASRYL+ MP+PDTISYNELINGYAQFG+I  AVEILS
Sbjct: 241 IDKDVISWNSVIAASARNGRLEQASRYLRQMPQPDTISYNELINGYAQFGEIEVAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMH  D+ MDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHLWDVGMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGL  STVVGSALIDMYSKCG VNYAEM+FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLGKSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLKKMKD+KPDNITFLNILLSCSDNQ+PLE TMQ+FKSMVEDYGI+PT
Sbjct: 421 NGKTMEVIHLFEKLKKMKDVKPDNITFLNILLSCSDNQLPLEATMQYFKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD YRSKRLIHELGFD+SGSVWRA LG CG S+DLKLAKVAAAK  
Sbjct: 481 IEHCCTMVRLMGQRGDVYRSKRLIHELGFDTSGSVWRAFLGVCGASRDLKLAKVAAAKVT 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
           VLGAADDYVHVMMSNI ASHGKWRDVK +RELMRKNGVRKETGYSWLIEMENE SSSN
Sbjct: 541 VLGAADDYVHVMMSNICASHGKWRDVKLIRELMRKNGVRKETGYSWLIEMENEISSSN 598

[Close]

BLAST of ClCG10G002610 vs. NCBI nr
Match: XP_023007751.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.7e-297
Identity = 512/598 (85.62%), Postives = 542/598 (90.64%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQ+PF  K  LYLQTQ  LLQKSA TI+I + CNFQPCFS + Q PWT+ RM L      
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAFQALKCNPNGY LVQLVRAC +HAW SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+PNLVSWNSLISGYVHCG FR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS AL+AS QLGWLILGQSIHSKV+KLGLE NTIVANCLID YGKC+SFEEAVKVFNDM
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKDTISWNSVIAASA+NGRLEQASRYL+ MPRPDTISYNELING AQFGDI +AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSC+I MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           G +IHCCITK GLDTSTVVGSALIDMYSKCG VNYAEM+FQSLPKKNLVSWN+MISG A 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK MKD+ PD+ITFL+ILLSCSDNQVPLE TMQ+FKSM+ED+GI PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           +EHCCTMVRLMGQRGD YRSK+LIHELGFDS+GSVWRALLGAC   KDLKLAKVAAAK +
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
            LGAADDYVHVMMSNI ASHGKWRDV+EVRELMRK GVRKETGYSWLIEMENENSSSN
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENENSSSN 598

[Close]

BLAST of ClCG10G002610 vs. NCBI nr
Match: XP_023553024.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1021.5 bits (2640), Expect = 2.8e-294
Identity = 508/598 (84.95%), Postives = 539/598 (90.13%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQR FS K  LYLQTQN LL K A TI+I + CNFQPCFS + Q PWT+ RM L      
Sbjct: 1   MQRSFSTKLQLYLQTQNPLLLKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAFQALKCNPNGY LVQLVRAC +HAW SCG QLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+PNLVSWNSLISGYVHCG FR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS QLGWLILGQSIHSK +KLGLE NTIVANCLIDMYGKC+SFEEAVKVFNDM
Sbjct: 181 SLSAALSASGQLGWLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKDTISWNSVIAASA+NGRLEQAS YL+ MPRPDTISYNELING AQFGDI +AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVD DEAWKALSFFTKMHSC+I MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDGDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           G +IHCCITK GLDTSTVVGSALIDMYSKCG VNYAE +FQSLPKKNLVSWN+MISG A 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAETIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK MKD+KPD+ITFL++LLSCSDNQVPLE TMQ+FKSM+ED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVKPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           +EHCCTMVRLMGQRGD YRSKRLIHELGFDS+GSVWRALLGAC   KDLKLAKVAAAK +
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKRLIHELGFDSNGSVWRALLGACAVWKDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
            LGAADDYVHVMMSNI ASHG+WRDV+EVRE+MRK GVRKETGYSWLIEMENENSSSN
Sbjct: 541 ELGAADDYVHVMMSNILASHGRWRDVREVREVMRKKGVRKETGYSWLIEMENENSSSN 598

[Close]

BLAST of ClCG10G002610 vs. NCBI nr
Match: XP_022923483.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita moschata])

HSP 1 Score: 1016.5 bits (2627), Expect = 9.1e-293
Identity = 505/598 (84.45%), Postives = 539/598 (90.13%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQR F+ K  LYLQTQN LLQK A TI+I + CNFQPCFS + Q PWT+ RM L      
Sbjct: 1   MQRSFATKLQLYLQTQNPLLQKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAFQALKCNPNGY LVQLVRAC +HAW SCG QLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+PNLVSWNSLISGYVHCG FR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS QLG LILGQSIHSK +KLGLE NTIVANCLIDMYGKC+SFEEAVKVFNDM
Sbjct: 181 SLSAALSASGQLGLLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKDTISWNSVIAASA+NGRLEQAS YL+ MPRPDTISYNELING AQFGDI +AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSC++ MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNVDMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           G +IHCCITK GLDTSTVVGSALIDMYSKCG VNYAEM+FQSLPKKNLVSWN+MISG A 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAQ 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK MKD+ PD+ITFL++LLSCSDNQVPLE TMQ+FKSM+ED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           +EHCCTMVRL+GQRGD YRSKRLIHELGFDS+GSVWRA+LGAC   KDLKLAKVAAAK +
Sbjct: 481 VEHCCTMVRLIGQRGDVYRSKRLIHELGFDSNGSVWRAVLGACAVWKDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
            LGAADDYVHVMMSNI ASHGKWRDV+EVRE+MRK GVRKETGYSWLIEM NENSSSN
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVREVMRKKGVRKETGYSWLIEMANENSSSN 598

[Close]

BLAST of ClCG10G002610 vs. NCBI nr
Match: XP_004147255.2 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus])

HSP 1 Score: 1015.0 bits (2623), Expect = 2.6e-292
Identity = 506/593 (85.33%), Postives = 536/593 (90.39%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFSIDDQAP T  R AL      
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LALAEAF+ALKCNPNGY LVQLVRAC SHA  SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYVHCG FRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE++T+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+NGRLEQASRYLQ MPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSCD+RMDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI MYSKCG VNYAEM+FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK  KD+KPDNITFLNILLSCSDNQVPLE TMQ++KSMVEDYGI+PT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD Y SKRLIHELGFDSSG VWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENE 588
           VLGAADDYV+VMMSNIFASHGKWRDVK VRELMR  GVRKETGYSWLIEMENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot
Match: Q9FGL1 (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 4.1e-155
Identity = 250/515 (48.54%), Postives = 370/515 (71.84%), Query Frame = 0


Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P+   LV L+R   ++ +VS   QLH Y+ + GF SN  +  +++ FY  ++S   AHKV
Sbjct: 53  PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWL 189
           FDEMP P+++SWNSL+SGYV  G F++ + LF++L  S+   + +S + AL+A ++L   
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172

Query: 190 ILGQSIHSKVLKLGLEE-NTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
            LG  IHSK++KLGLE+ N +V NCLIDMYGKC   ++AV VF  M +KDT+SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232

Query: 250 SAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVL 309
            ++NG+LE    +   MP PDT++YNELI+ + + GD  +A ++LS M +PNSSSWN +L
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292

Query: 310 TGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLD 369
           TGYV+ +++ +A  FFTKMHS  +R D+++ S +L+ VA L+ + WG  IH C  K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352

Query: 370 TSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKL 429
           +  VV SALIDMYSKCG + +AE+MF ++P+KNL+ WN MISG+A NG ++E I LF +L
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412

Query: 430 KKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQR 489
           K+ + +KPD  TFLN+L  CS  +VP+EV + +F+ M+ +Y I+P++EHCC+++R MGQR
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472

Query: 490 GDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAA--DDYVHVM 549
           G+ +++K++I E GF   G  WRALLGAC   KDLK AK  AAK + LG A  D+Y++++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532

Query: 550 MSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           MSN++A H +WR+V ++R++MR++GV KE G SW+
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567

[Close]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot
Match: Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-79
Identity = 171/535 (31.96%), Postives = 293/535 (54.77%), Query Frame = 0


Query: 91  GHQLHSYILRSGFAS-NVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYV 150
           G ++H +++ +G     V +G  +VN Y K  S   A +VF  M   + VSWNS+I+G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 151 HCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTI 210
             G F +A+  +  +   + L  S++L ++LS+ + L W  LGQ IH + LKLG++ N  
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451

Query: 211 VANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGR-----------LEQA 270
           V+N L+ +Y +     E  K+F+ M + D +SWNS+I A A++ R            ++A
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 271 SRYL------QLMPRPDTISYNEL---ING--------------------YAQFGDIGDA 330
            + L       ++    ++S+ EL   I+G                    Y + G++   
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 331 VEILSKM-DSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAG 390
            +I S+M +  ++ +WN++++GY+  +   KAL     M     R+D F ++++LS  A 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 391 LSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSM 450
           ++ L+ G+ +H C  +  L++  VVGSAL+DMYSKCGR++YA   F ++P +N  SWNSM
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 451 ISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVED 510
           ISG+A +G+  E + LFE +K      PD++TF+ +L +CS   + LE   + F+SM + 
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDS 751

Query: 511 YGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGAC--GTSKDLKLA 570
           YG+ P IEH   M  ++G+ G+  + +  I ++    +  +WR +LGAC     +  +L 
Sbjct: 752 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 811

Query: 571 KVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           K AA     L   +   +V++ N++A+ G+W D+ + R+ M+   V+KE GYSW+
Sbjct: 812 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 2.4e-78
Identity = 179/569 (31.46%), Postives = 308/569 (54.13%), Query Frame = 0


Query: 78  LVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPN 137
           ++R+CA+ + +  G QLH++ L+S FA++  V TA ++ Y K ++   A  +FD     N
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346

Query: 138 LVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHS 197
             S+N++I+GY    H  KAL LF +L  S    D  SLS    A + +  L  G  I+ 
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406

Query: 198 KVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGR-LE 257
             +K  L  +  VAN  IDMYGKC++  EA +VF++M  +D +SWN++IAA  +NG+  E
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466

Query: 258 QASRYLQLMP---RPDTISYN----------------------------------ELING 317
               ++ ++     PD  ++                                    LI+ 
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526

Query: 318 YAQFGDIGDA----------------VEILSKMDSPNSS----SWNAVLTGYVDRDEAWK 377
           Y++ G I +A                +E L KM +        SWN++++GYV ++++  
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586

Query: 378 ALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALID 437
           A   FT+M    I  D+FT++++L   A L++   G  IH  + K  L +   + S L+D
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646

Query: 438 MYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNI 497
           MYSKCG ++ + +MF+   +++ V+WN+MI G+AH+GK  E I LFE++  +++IKP+++
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHV 706

Query: 498 TFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIH 557
           TF++IL +C+   + ++  +++F  M  DYG+ P + H   MV ++G+ G   R+  LI 
Sbjct: 707 TFISILRACAHMGL-IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 766

Query: 558 ELGFDSSGSVWRALLGACGTSK-DLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWR 588
           E+ F++   +WR LLG C   + ++++A+ A A  + L   D   + ++SN++A  G W 
Sbjct: 767 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 826

[Close]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.5e-77
Identity = 167/558 (29.93%), Postives = 298/558 (53.41%), Query Frame = 0


Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P  Y    L++ C   A +  G ++H  +++SGF+ ++F  T + N Y K    + A KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY-SLSTALSASSQLGW 189
           FD MP  +LVSWN++++GY   G  R AL + ++    ENL  S+ ++ + L A S L  
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRL 252

Query: 190 LILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
           + +G+ IH   ++ G +    ++  L+DMY KC S E A ++F+ M++++ +SWNS+I A
Sbjct: 253 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 312

Query: 250 SAKNGRLEQASRYLQLM----PRPDTIS-------------------------------- 309
             +N   ++A    Q M     +P  +S                                
Sbjct: 313 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 372

Query: 310 ---YNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHS 369
               N LI+ Y +  ++  A  +  K+ S    SWNA++ G+        AL++F++M S
Sbjct: 373 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 432

Query: 370 CDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNY 429
             ++ D FT+ S+++ +A LS       IH  + +  LD +  V +AL+DMY+KCG +  
Sbjct: 433 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 492

Query: 430 AEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCS 489
           A ++F  + ++++ +WN+MI G+  +G     ++LFE+++K   IKP+ +TFL+++ +CS
Sbjct: 493 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACS 552

Query: 490 DNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSV 549
            + + +E  ++ F  M E+Y I  +++H   MV L+G+ G    +   I ++    + +V
Sbjct: 553 HSGL-VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 612

Query: 550 WRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRK 588
           + A+LGAC   K++  A+ AA +   L   D   HV+++NI+ +   W  V +VR  M +
Sbjct: 613 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 672

[Close]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.5e-76
Identity = 168/518 (32.43%), Postives = 274/518 (52.90%), Query Frame = 0


Query: 71  NGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVF 130
           N Y+   ++ AC+    ++ G Q+HS I +S F S+V++G+A+V+ Y K  + + A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 131 DEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLI 190
           DEM   N+VSWNSLI+ +   G   +AL +F  +  S    D  +L++ +SA + L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 191 LGQSIHSKVLKLG-LEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAAS 250
           +GQ +H +V+K   L  + I++N  +DMY KC   +EA  +F+                 
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS---------------- 330

Query: 251 AKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLT 310
                          MP  + I+   +I+GYA       A  + +KM   N  SWNA++ 
Sbjct: 331 ---------------MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 390

Query: 311 GYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGL-- 370
           GY    E  +ALS F  +    +    ++F++IL   A L+ L  G+  H  + K G   
Sbjct: 391 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 450

Query: 371 ----DTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVID 430
               +    VG++LIDMY KCG V    ++F+ + +++ VSWN+MI GFA NG   E ++
Sbjct: 451 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 510

Query: 431 LFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVR 490
           LF ++ +  + KPD+IT + +L +C      +E    +F SM  D+G+ P  +H   MV 
Sbjct: 511 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 570

Query: 491 LMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYV 550
           L+G+ G    +K +I E+       +W +LL AC   +++ L K  A K + +  ++   
Sbjct: 571 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 630

Query: 551 HVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           +V++SN++A  GKW DV  VR+ MRK GV K+ G SW+
Sbjct: 631 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635

[Close]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL
Match: A0A6J1L1J5 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxima OX=3661 GN=LOC111500270 PE=4 SV=1)

HSP 1 Score: 1030.8 bits (2664), Expect = 2.3e-297
Identity = 512/598 (85.62%), Postives = 542/598 (90.64%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQ+PF  K  LYLQTQ  LLQKSA TI+I + CNFQPCFS + Q PWT+ RM L      
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAFQALKCNPNGY LVQLVRAC +HAW SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+PNLVSWNSLISGYVHCG FR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS AL+AS QLGWLILGQSIHSKV+KLGLE NTIVANCLID YGKC+SFEEAVKVFNDM
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKDTISWNSVIAASA+NGRLEQASRYL+ MPRPDTISYNELING AQFGDI +AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSC+I MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           G +IHCCITK GLDTSTVVGSALIDMYSKCG VNYAEM+FQSLPKKNLVSWN+MISG A 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK MKD+ PD+ITFL+ILLSCSDNQVPLE TMQ+FKSM+ED+GI PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           +EHCCTMVRLMGQRGD YRSK+LIHELGFDS+GSVWRALLGAC   KDLKLAKVAAAK +
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
            LGAADDYVHVMMSNI ASHGKWRDV+EVRELMRK GVRKETGYSWLIEMENENSSSN
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENENSSSN 598

[Close]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL
Match: A0A6J1E9S2 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita moschata OX=3662 GN=LOC111431163 PE=4 SV=1)

HSP 1 Score: 1016.5 bits (2627), Expect = 4.4e-293
Identity = 505/598 (84.45%), Postives = 539/598 (90.13%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQR F+ K  LYLQTQN LLQK A TI+I + CNFQPCFS + Q PWT+ RM L      
Sbjct: 1   MQRSFATKLQLYLQTQNPLLQKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAFQALKCNPNGY LVQLVRAC +HAW SCG QLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+K+ESF SAHKVFDEMP+PNLVSWNSLISGYVHCG FR ALS FI LDGSENLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS QLG LILGQSIHSK +KLGLE NTIVANCLIDMYGKC+SFEEAVKVFNDM
Sbjct: 181 SLSAALSASGQLGLLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           IDKDTISWNSVIAASA+NGRLEQAS YL+ MPRPDTISYNELING AQFGDI +AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSC++ MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNVDMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           G +IHCCITK GLDTSTVVGSALIDMYSKCG VNYAEM+FQSLPKKNLVSWN+MISG A 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAQ 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK MKD+ PD+ITFL++LLSCSDNQVPLE TMQ+FKSM+ED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           +EHCCTMVRL+GQRGD YRSKRLIHELGFDS+GSVWRA+LGAC   KDLKLAKVAAAK +
Sbjct: 481 VEHCCTMVRLIGQRGDVYRSKRLIHELGFDSNGSVWRAVLGACAVWKDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
            LGAADDYVHVMMSNI ASHGKWRDV+EVRE+MRK GVRKETGYSWLIEM NENSSSN
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVREVMRKKGVRKETGYSWLIEMANENSSSN 598

[Close]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL
Match: A0A0A0L6U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.3e-292
Identity = 506/593 (85.33%), Postives = 536/593 (90.39%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFSIDDQAP T  R AL      
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LALAEAF+ALKCNPNGY LVQLVRAC SHA  SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYVHCG FRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE++T+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+NGRLEQASRYLQ MPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSCD+RMDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI MYSKCG VNYAEM+FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK  KD+KPDNITFLNILLSCSDNQVPLE TMQ++KSMVEDYGI+PT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD Y SKRLIHELGFDSSG VWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENE 588
           VLGAADDYV+VMMSNIFASHGKWRDVK VRELMR  GVRKETGYSWLIEMENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL
Match: A0A1S3BK19 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo OX=3656 GN=LOC103490879 PE=4 SV=1)

HSP 1 Score: 1005.7 bits (2599), Expect = 7.8e-290
Identity = 505/598 (84.45%), Postives = 536/598 (89.63%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFS+DDQAP T  R AL      
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAF+ALKCNPNGY LVQLVRAC SHAW SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYV CG FRKAL LFIQLDGSENLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE+NT+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+N RLEQASRYLQLMPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNRRLEQASRYLQLMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE WKALSFFTKMHSCD+ MDQFTFSSILSGVAGLSAL+W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI+MYSKCG VN AE++FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLKK KD+KPDNITFL IL SCSDNQVPLE TMQ FKSMVEDYGI+PT
Sbjct: 421 NGKTMEVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD + SKRLIHELGFDSSGSVWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
           VLGAADDYV+VM+SNIFASHGKWRDVK VRELM K G RKETGYSWLIEMENE   SN
Sbjct: 541 VLGAADDYVYVMLSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLSN 593

[Close]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL
Match: A0A5D3CKT8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00420 PE=4 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 1.7e-289
Identity = 505/598 (84.45%), Postives = 535/598 (89.46%), Query Frame = 0


Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMAL------ 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFS+DDQAP T  R AL      
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHT 60

Query: 61  AELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
           AELALAEAF+ALKCNPNGY LVQLVRAC SHAW SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYV CG FRKAL LFIQLDGSENLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE+NT+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+N RLEQASRYLQ MPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNRRLEQASRYLQRMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE WKALSFFTKMHSCD+ MDQFTFSSILSGVAGLSAL+W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI+MYSKCG VN AE++FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLKK KD+KPDNITFL IL SCSDNQVPLE TMQ FKSMVEDYGI+PT
Sbjct: 421 NGKTMEVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD + SKRLIHELGFDSSGSVWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
           VLGAADDYV+VMMSNIFASHGKWRDVK VRELM K G RKETGYSWLIEMENE   SN
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLSN 593

[Close]

BLAST of ClCG10G002610 vs. TAIR 10
Match: AT5G47460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 549.7 bits (1415), Expect = 2.9e-156
Identity = 250/515 (48.54%), Postives = 370/515 (71.84%), Query Frame = 0


Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P+   LV L+R   ++ +VS   QLH Y+ + GF SN  +  +++ FY  ++S   AHKV
Sbjct: 53  PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWL 189
           FDEMP P+++SWNSL+SGYV  G F++ + LF++L  S+   + +S + AL+A ++L   
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172

Query: 190 ILGQSIHSKVLKLGLEE-NTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
            LG  IHSK++KLGLE+ N +V NCLIDMYGKC   ++AV VF  M +KDT+SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232

Query: 250 SAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVL 309
            ++NG+LE    +   MP PDT++YNELI+ + + GD  +A ++LS M +PNSSSWN +L
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292

Query: 310 TGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLD 369
           TGYV+ +++ +A  FFTKMHS  +R D+++ S +L+ VA L+ + WG  IH C  K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352

Query: 370 TSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKL 429
           +  VV SALIDMYSKCG + +AE+MF ++P+KNL+ WN MISG+A NG ++E I LF +L
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412

Query: 430 KKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQR 489
           K+ + +KPD  TFLN+L  CS  +VP+EV + +F+ M+ +Y I+P++EHCC+++R MGQR
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472

Query: 490 GDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAA--DDYVHVM 549
           G+ +++K++I E GF   G  WRALLGAC   KDLK AK  AAK + LG A  D+Y++++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532

Query: 550 MSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           MSN++A H +WR+V ++R++MR++GV KE G SW+
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567

[Close]

BLAST of ClCG10G002610 vs. TAIR 10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 1.5e-80
Identity = 171/535 (31.96%), Postives = 293/535 (54.77%), Query Frame = 0


Query: 91  GHQLHSYILRSGFAS-NVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYV 150
           G ++H +++ +G     V +G  +VN Y K  S   A +VF  M   + VSWNS+I+G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 151 HCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTI 210
             G F +A+  +  +   + L  S++L ++LS+ + L W  LGQ IH + LKLG++ N  
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451

Query: 211 VANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGR-----------LEQA 270
           V+N L+ +Y +     E  K+F+ M + D +SWNS+I A A++ R            ++A
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 271 SRYL------QLMPRPDTISYNEL---ING--------------------YAQFGDIGDA 330
            + L       ++    ++S+ EL   I+G                    Y + G++   
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 331 VEILSKM-DSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAG 390
            +I S+M +  ++ +WN++++GY+  +   KAL     M     R+D F ++++LS  A 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 391 LSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSM 450
           ++ L+ G+ +H C  +  L++  VVGSAL+DMYSKCGR++YA   F ++P +N  SWNSM
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 451 ISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVED 510
           ISG+A +G+  E + LFE +K      PD++TF+ +L +CS   + LE   + F+SM + 
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDS 751

Query: 511 YGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGAC--GTSKDLKLA 570
           YG+ P IEH   M  ++G+ G+  + +  I ++    +  +WR +LGAC     +  +L 
Sbjct: 752 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 811

Query: 571 KVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           K AA     L   +   +V++ N++A+ G+W D+ + R+ M+   V+KE GYSW+
Sbjct: 812 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]

BLAST of ClCG10G002610 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-79
Identity = 179/569 (31.46%), Postives = 308/569 (54.13%), Query Frame = 0


Query: 78  LVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPN 137
           ++R+CA+ + +  G QLH++ L+S FA++  V TA ++ Y K ++   A  +FD     N
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346

Query: 138 LVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHS 197
             S+N++I+GY    H  KAL LF +L  S    D  SLS    A + +  L  G  I+ 
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406

Query: 198 KVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGR-LE 257
             +K  L  +  VAN  IDMYGKC++  EA +VF++M  +D +SWN++IAA  +NG+  E
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466

Query: 258 QASRYLQLMP---RPDTISYN----------------------------------ELING 317
               ++ ++     PD  ++                                    LI+ 
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526

Query: 318 YAQFGDIGDA----------------VEILSKMDSPNSS----SWNAVLTGYVDRDEAWK 377
           Y++ G I +A                +E L KM +        SWN++++GYV ++++  
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586

Query: 378 ALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALID 437
           A   FT+M    I  D+FT++++L   A L++   G  IH  + K  L +   + S L+D
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646

Query: 438 MYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNI 497
           MYSKCG ++ + +MF+   +++ V+WN+MI G+AH+GK  E I LFE++  +++IKP+++
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHV 706

Query: 498 TFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIH 557
           TF++IL +C+   + ++  +++F  M  DYG+ P + H   MV ++G+ G   R+  LI 
Sbjct: 707 TFISILRACAHMGL-IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 766

Query: 558 ELGFDSSGSVWRALLGACGTSK-DLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWR 588
           E+ F++   +WR LLG C   + ++++A+ A A  + L   D   + ++SN++A  G W 
Sbjct: 767 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 826

[Close]

BLAST of ClCG10G002610 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 290.4 bits (742), Expect = 3.2e-78
Identity = 167/558 (29.93%), Postives = 298/558 (53.41%), Query Frame = 0


Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P  Y    L++ C   A +  G ++H  +++SGF+ ++F  T + N Y K    + A KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY-SLSTALSASSQLGW 189
           FD MP  +LVSWN++++GY   G  R AL + ++    ENL  S+ ++ + L A S L  
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRL 252

Query: 190 LILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
           + +G+ IH   ++ G +    ++  L+DMY KC S E A ++F+ M++++ +SWNS+I A
Sbjct: 253 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 312

Query: 250 SAKNGRLEQASRYLQLM----PRPDTIS-------------------------------- 309
             +N   ++A    Q M     +P  +S                                
Sbjct: 313 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 372

Query: 310 ---YNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHS 369
               N LI+ Y +  ++  A  +  K+ S    SWNA++ G+        AL++F++M S
Sbjct: 373 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 432

Query: 370 CDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNY 429
             ++ D FT+ S+++ +A LS       IH  + +  LD +  V +AL+DMY+KCG +  
Sbjct: 433 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 492

Query: 430 AEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCS 489
           A ++F  + ++++ +WN+MI G+  +G     ++LFE+++K   IKP+ +TFL+++ +CS
Sbjct: 493 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACS 552

Query: 490 DNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSV 549
            + + +E  ++ F  M E+Y I  +++H   MV L+G+ G    +   I ++    + +V
Sbjct: 553 HSGL-VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 612

Query: 550 WRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRK 588
           + A+LGAC   K++  A+ AA +   L   D   HV+++NI+ +   W  V +VR  M +
Sbjct: 613 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 672

[Close]

BLAST of ClCG10G002610 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 286.2 bits (731), Expect = 6.0e-77
Identity = 168/518 (32.43%), Postives = 274/518 (52.90%), Query Frame = 0


Query: 71  NGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVF 130
           N Y+   ++ AC+    ++ G Q+HS I +S F S+V++G+A+V+ Y K  + + A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 131 DEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLI 190
           DEM   N+VSWNSLI+ +   G   +AL +F  +  S    D  +L++ +SA + L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 191 LGQSIHSKVLKLG-LEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAAS 250
           +GQ +H +V+K   L  + I++N  +DMY KC   +EA  +F+                 
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS---------------- 330

Query: 251 AKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLT 310
                          MP  + I+   +I+GYA       A  + +KM   N  SWNA++ 
Sbjct: 331 ---------------MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 390

Query: 311 GYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGL-- 370
           GY    E  +ALS F  +    +    ++F++IL   A L+ L  G+  H  + K G   
Sbjct: 391 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 450

Query: 371 ----DTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVID 430
               +    VG++LIDMY KCG V    ++F+ + +++ VSWN+MI GFA NG   E ++
Sbjct: 451 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 510

Query: 431 LFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVR 490
           LF ++ +  + KPD+IT + +L +C      +E    +F SM  D+G+ P  +H   MV 
Sbjct: 511 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 570

Query: 491 LMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYV 550
           L+G+ G    +K +I E+       +W +LL AC   +++ L K  A K + +  ++   
Sbjct: 571 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 630

Query: 551 HVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           +V++SN++A  GKW DV  VR+ MRK GV K+ G SW+
Sbjct: 631 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635

The following BLAST results are available for this feature:

BLAST of ClCG10G002610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905285.1	3.9e-304	87.46	putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispid...	[more]
XP_023007751.1	4.7e-297	85.62	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima...	[more]
XP_023553024.1	2.8e-294	84.95	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita pepo s...	[more]
XP_022923483.1	9.1e-293	84.45	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita moscha...	[more]
XP_004147255.2	2.6e-292	85.33	putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus]	[more]

BLAST of ClCG10G002610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL1	4.1e-155	48.54	Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis th...	[more]
Q9FIB2	2.2e-79	31.96	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]
Q9FWA6	2.4e-78	31.46	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	4.5e-77	29.93	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9SIT7	8.5e-76	32.43	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of ClCG10G002610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1J5	2.3e-297	85.62	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxi...	[more]
A0A6J1E9S2	4.4e-293	84.45	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita mosc...	[more]
A0A0A0L6U8	1.3e-292	85.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1	[more]
A0A1S3BK19	7.8e-290	84.45	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo O...	[more]
A0A5D3CKT8	1.7e-289	84.45	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]

BLAST of ClCG10G002610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47460.1	2.9e-156	48.54	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G09950.1	1.5e-80	31.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G02330.1	1.7e-79	31.46	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	3.2e-78	29.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	6.0e-77	32.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 53..190 e-value: 4.3E-22 score: 80.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 265..353 e-value: 1.1E-18 score: 69.3 coord: 355..455 e-value: 1.4E-18 score: 68.8 coord: 191..264 e-value: 1.1E-15 score: 59.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 456..591 e-value: 1.4E-7 score: 33.3
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 267..296 e-value: 4.6E-6 score: 26.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 299..347 e-value: 2.9E-7 score: 30.6 coord: 400..444 e-value: 1.1E-9 score: 38.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 240..266 e-value: 0.0032 score: 17.6 coord: 212..237 e-value: 2.4E-5 score: 24.3 coord: 139..163 e-value: 2.3E-6 score: 27.4 coord: 547..572 e-value: 0.49 score: 10.8 coord: 111..135 e-value: 1.1 score: 9.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 271..297 e-value: 0.0013 score: 16.8 coord: 403..437 e-value: 2.3E-6 score: 25.4 coord: 139..161 e-value: 8.6E-5 score: 20.5 coord: 212..238 e-value: 3.7E-6 score: 24.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 207..241 score: 9.54735
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 137..167 score: 9.284279
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 269..303 score: 9.941957
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..431 score: 9.854266
None	No IPR available	PANTHER	PTHR47928:SF110	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 58..582
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 58..582

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G002610.2	ClCG10G002610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding