Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGCGCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAGTTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGCTCTACAGATGGAGGTGTTGGATATGGAAGTGGGGAAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGTTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGCTGGGTCTGGTGGTGGTTATGGTAGTGGGGGATCAGGTAAAGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGTGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGAGCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGAGGAGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA
mRNA sequence
ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGCGCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAGTTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGCTCTACAGATGGAGGTGTTGGATATGGAAGTGGGGAAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGTTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGCTGGGTCTGGTGGTGGTTATGGTAGTGGGGGATCAGGTAAAGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGTGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGAGCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGAGGAGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA
Coding sequence (CDS)
ATGGAGAAGCATAGAGTACAATGCCTTGCTTTCTTTGCTTTGTTGGGTTTAGGGTTAGCTTCTGCAGCTAGAACCCTTGTTGCCTATGATGGTTATGTCCATGCGCCAGTGTTAGGGCATGTTTCTATTGGATATGGTAGTGGAGAAGGTGGTGGTACTGGATATGGAGTTACTGCTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGCTCTACAGATGGAGGTGTTGGATATGGAAGTGGGGAAGGTGAAGGAAGTGGCGCTGGATATGGAGGTGGAAAAGAAGGTGGTTATGGCGGTGGTGTTGGTGGAGGAAGTGGTGGTGGAAGCGGTGGTGGATATGGCCCGGGCGGTGGTTATGGAAGTGGAGGTGGAGCTGGGTCTGGTGGTGGTTATGGTAGTGGGGGATCAGGTAAAGGAGGTGGGGGTGGTGGTGGAAATGGAGGCGGTGGCGGTTACGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGTGGTGGAGGACAAGGAGGCGGCTCAGGGAGTGGAGCAGGAGGGCGTGGAGGTGGTGGAGGAGGCGGCTCAGGGGGTGGCTATGGTGGAGGAGGAGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGGTGGCTCCGGCGGCGGGTATGGTGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGAGTGGAGAGGGTGGTGGTGGATATGCACCTTGA
Protein sequence
MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAGYGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGYGGGVGGGSGGGSGGGYGPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGRGGGGGGGSGGGYGGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSGEGGGGYAP
Homology
BLAST of ClCG10G001560 vs. NCBI nr
Match:
XP_022923391.1 (glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata] >XP_022923392.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 194.1 bits (492), Expect = 1.4e-45
Identity = 214/266 (80.45%), Postives = 222/266 (83.46%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H +Q L FFALLG GLASAARTLVAYD V PVLG VS+GYG GEGGG+GYGVT G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 Y-GGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGG 120
Y GGGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGG
Sbjct: 61 YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120
Query: 121 YGPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGS 180
YGPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGANGGGYGSGGGQGGGS
Sbjct: 121 YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGS 180
Query: 181 GSGAGGRGGGGGGGSGGGYGGGGENGGGYGS-----------------GGGGGSGGGYGG 240
GSGAGG GGGGGGGSGGGYGGGG NGGGYGS GGGGGSGGGYGG
Sbjct: 181 GSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGGGGSGGGYGG 240
Query: 241 GGAQGGGYGAGGGSGEG---GGGYAP 244
GGAQGGGYGAGGGSG+G GGGYAP
Sbjct: 241 GGAQGGGYGAGGGSGQGGGHGGGYAP 266
BLAST of ClCG10G001560 vs. NCBI nr
Match:
XP_038903688.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 191.8 bits (486), Expect = 6.8e-45
Identity = 207/245 (84.49%), Postives = 212/245 (86.53%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME HRVQ LAFFA LGLGLASAARTL+AYDG VHAPVLGHVSIGYG GEG G GYGVT G
Sbjct: 1 MENHRVQYLAFFAFLGLGLASAARTLIAYDGNVHAPVLGHVSIGYGGGEGAGGGYGVTVG 60
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGYGGGVGGGSGGGSGG---- 120
YGGGGGGGRGGGGGSTDGGVGYGSG GEGSGAGYGGG+E GYG G GGG GG GG
Sbjct: 61 YGGGGGGGRGGGGGSTDGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGVG 120
Query: 121 -GYGPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGG 180
GYGPGGGYG+GGGAGSGGGYG+GGSG GGGGGGGNGGGGGYGAGGANGGGYGSGGGQGG
Sbjct: 121 VGYGPGGGYGNGGGAGSGGGYGNGGSGYGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGG 180
Query: 181 GSGSGAGGRGGGGGGGSGGGYGGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSG 240
GSGSGAGG GGGGGGGSGGGYGGGGENGGGYGSGGG G G G G GG +GGG G G G G
Sbjct: 181 GSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGQGGGSGSGAGG-RGGGGGGGSGGG 240
BLAST of ClCG10G001560 vs. NCBI nr
Match:
XP_023007588.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima])
HSP 1 Score: 189.9 bits (481), Expect = 2.6e-44
Identity = 213/271 (78.60%), Postives = 221/271 (81.55%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H ++ L FFALLG GLASAARTLVAYD V PVLG VSIGYG GEGGG+GYGVTAG
Sbjct: 13 MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGGY 120
Y GGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGGY
Sbjct: 73 YAGGGGGGRGGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 132
Query: 121 GPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGAN------GGGYGSGGG 180
GPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGAN GGGYGSGGG
Sbjct: 133 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYGSGGG 192
Query: 181 QGGGSGSGAGGRGGGGGGGSGGGYGGGGENGGGYGSGG-----------------GGGSG 240
QGG SGSGAGG GGGGGGGSGGGYGGGG NGGGYGSGG GGGSG
Sbjct: 193 QGGSSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGVGGGSG 252
Query: 241 GGYGGGGAQGGGYGAGGGSGEG---GGGYAP 244
GGYGGGGAQGGGYGAGGGSG+G GGGYAP
Sbjct: 253 GGYGGGGAQGGGYGAGGGSGQGGGHGGGYAP 283
BLAST of ClCG10G001560 vs. NCBI nr
Match:
XP_023552301.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 186.8 bits (473), Expect = 2.2e-43
Identity = 211/265 (79.62%), Postives = 219/265 (82.64%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H +Q L FFALLG GLASAARTLVAYDG V PVLG VS+ G GGG+GYGVTAG
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDGNVQVPVLGRVSV----GSGGGSGYGVTAG 60
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGGY 120
Y GGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGGY
Sbjct: 61 YAGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 120
Query: 121 GPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGSG 180
GPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGANGGGYGSGGGQGGGSG
Sbjct: 121 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSG 180
Query: 181 SGAGGRGGGGGGGSGGGYGGGGENGGGYGS-----------------GGGGGSGGGYGGG 240
SGAGG GGGGGGGSGGGYGGGG NGGGYGS GGGGGSGGGYGGG
Sbjct: 181 SGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGGGGGSGGGYGGG 240
Query: 241 GAQGGGYGAGGGSGEG---GGGYAP 244
GAQGGGYGAGGGSG+G GGGYAP
Sbjct: 241 GAQGGGYGAGGGSGQGGGHGGGYAP 261
BLAST of ClCG10G001560 vs. NCBI nr
Match:
KAG6577707.1 (hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 172.2 bits (435), Expect = 5.6e-39
Identity = 198/242 (81.82%), Postives = 205/242 (84.71%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H +Q L FFALLG GLASAARTLVAYD V PVLG VS+GYG GEGGG+GYGVT G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGGY 120
Y GGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGGY
Sbjct: 61 YAGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 120
Query: 121 GPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGSG 180
GPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGANGGGYGSGGGQGGGSG
Sbjct: 121 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSG 180
Query: 181 SGAGGRGGGGGGGSGGGYGGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSGEGG 240
SG GG GGGGGGGSGGGYGGGG NGGGYGSGGG G G G G GG GGG G G G G GG
Sbjct: 181 SGTGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGG-HGGGGGGGSGGGYGG 240
BLAST of ClCG10G001560 vs. ExPASy TrEMBL
Match:
A0A6J1E5Z3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 6.7e-46
Identity = 214/266 (80.45%), Postives = 222/266 (83.46%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H +Q L FFALLG GLASAARTLVAYD V PVLG VS+GYG GEGGG+GYGVT G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 Y-GGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGG 120
Y GGGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGG
Sbjct: 61 YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120
Query: 121 YGPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGS 180
YGPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGANGGGYGSGGGQGGGS
Sbjct: 121 YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGS 180
Query: 181 GSGAGGRGGGGGGGSGGGYGGGGENGGGYGS-----------------GGGGGSGGGYGG 240
GSGAGG GGGGGGGSGGGYGGGG NGGGYGS GGGGGSGGGYGG
Sbjct: 181 GSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGGGGGSGSGAGGHGGGGGGGSGGGYGG 240
Query: 241 GGAQGGGYGAGGGSGEG---GGGYAP 244
GGAQGGGYGAGGGSG+G GGGYAP
Sbjct: 241 GGAQGGGYGAGGGSGQGGGHGGGYAP 266
BLAST of ClCG10G001560 vs. ExPASy TrEMBL
Match:
A0A6J1L823 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500160 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 213/271 (78.60%), Postives = 221/271 (81.55%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H ++ L FFALLG GLASAARTLVAYD V PVLG VSIGYG GEGGG+GYGVTAG
Sbjct: 13 MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGGY 120
Y GGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGGY
Sbjct: 73 YAGGGGGGRGGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 132
Query: 121 GPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGAN------GGGYGSGGG 180
GPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGAN GGGYGSGGG
Sbjct: 133 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYGSGGG 192
Query: 181 QGGGSGSGAGGRGGGGGGGSGGGYGGGGENGGGYGSGG-----------------GGGSG 240
QGG SGSGAGG GGGGGGGSGGGYGGGG NGGGYGSGG GGGSG
Sbjct: 193 QGGSSGSGAGGHGGGGGGGSGGGYGGGGANGGGYGSGGGEGGGSGSGAGGHGGGVGGGSG 252
Query: 241 GGYGGGGAQGGGYGAGGGSGEG---GGGYAP 244
GGYGGGGAQGGGYGAGGGSG+G GGGYAP
Sbjct: 253 GGYGGGGAQGGGYGAGGGSGQGGGHGGGYAP 283
BLAST of ClCG10G001560 vs. ExPASy TrEMBL
Match:
A0A0A0L3Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 7.9e-39
Identity = 210/272 (77.21%), Postives = 218/272 (80.15%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME HRVQ LA FALLGLGLASAARTL+AYDG VHAPVLGH S+GYG GEG G+GYGV+ G
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY---GGGVGGGSGGGSGGG 120
YGGGGGGGRGGGGGST+GGVGYG+G GEGSGAGYGGG+E GY GGG GGGSGGG GGG
Sbjct: 61 YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
Query: 121 ----YGPGGGYGSGGGAGSGGGYGSGGS---GKGGGGGGGNGGG-GGYGAGGANGGGYGS 180
YGP GGYGSG G GSGGGYG GGS G GGGGGGGNGGG GGYGAG A+GGGYGS
Sbjct: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
Query: 181 GGGQGGGSGSGAGGRGGGGGGGSGGGYGGGGENGGGYGS-----------------GGGG 240
GGGQGGGSGSG GG GGGGGGG GGGYG GG NGGGYGS GGGG
Sbjct: 181 GGGQGGGSGSGGGGHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSGAGGHGGGGGG 240
Query: 241 GSGGGY-GGGGAQGGGYGAGGGSGEGGGGYAP 244
GSGGGY GGGGAQGGGYG GGGSG GGGGYAP
Sbjct: 241 GSGGGYGGGGGAQGGGYGGGGGSGGGGGGYAP 271
BLAST of ClCG10G001560 vs. ExPASy TrEMBL
Match:
A0A6J1E9J4 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 1.9e-37
Identity = 194/249 (77.91%), Postives = 203/249 (81.53%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME H +Q L FFALLG GLASAARTLVAYD V PVLG VS+GYG GEGGG+GYGVT G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 Y-GGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGY--GGGVGGGSGGGSGGG 120
Y GGGGGGGRGGGGGS GGVGYG+G GEGSGAGYGGG++ GY GGG GGGSGGGSGGG
Sbjct: 61 YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120
Query: 121 YGPGGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGS 180
YGPGGGYGSGGGAGSGGGYGSGG G GGGGGGG+GGGGGYGAGGANGGGYGSGGG G
Sbjct: 121 YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYGS-- 180
Query: 181 GSGAGGRGGGGGGGSGGGYGGGGENGGGYGSGGGGGSGGGYGGGGAQGGGYGAGGGSGEG 240
GGGGGGGSG G GG+G GGGGGSGGGYGGGGAQGGGYGAGGGSG+G
Sbjct: 181 -------GGGGGGGSGSG-------AGGHGGGGGGGSGGGYGGGGAQGGGYGAGGGSGQG 233
Query: 241 ---GGGYAP 244
GGGYAP
Sbjct: 241 GGHGGGYAP 233
BLAST of ClCG10G001560 vs. ExPASy TrEMBL
Match:
A0A1S4DY03 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103490777 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27
Identity = 165/218 (75.69%), Postives = 177/218 (81.19%), Query Frame = 0
Query: 1 MEKHRVQCLAFFALLGLGLASAARTLVAYDGYVHAPVLGHVSIGYGSGEGGGTGYGVTAG 60
ME HRVQ LA FALLGLGLASAARTL+AYDG V PVLGH S+GYG GEGGG+GYG++ G
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
Query: 61 YGGGGGGGRGGGGGSTDGGVGYGSGEGEGSGAGYGGGKEGGYGGGVGGGSGGGSGGGYGP 120
YGGGGGGG GGGGGST+GG GYG+G GEGSG+GYGGG GG GGG G G+G SGGGYG
Sbjct: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGS 120
Query: 121 GGGYGSGGGAGSGGGYGSGGSGKGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGGGSGSG 180
GG G GGG+GSGGG G GGGGG G GGGYG+GG NGGGYGSGGG+GGGSGSG
Sbjct: 121 GG--GQGGGSGSGGG--------GHGGGGGGGWGGGYGSGG-NGGGYGSGGGEGGGSGSG 180
Query: 181 AGGRGGGGGGGSGGGYGGGGENGGGYGSGGGGGSGGGY 219
AGG GGGGGGGSGGGYGGGG GGGYG GGG G GGGY
Sbjct: 181 AGGHGGGGGGGSGGGYGGGGAQGGGYGGGGGSGGGGGY 206
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022923391.1 | 1.4e-45 | 80.45 | glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschat... | [more] |
| XP_038903688.1 | 6.8e-45 | 84.49 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
| XP_023007588.1 | 2.6e-44 | 78.60 | glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima] | [more] |
| XP_023552301.1 | 2.2e-43 | 79.62 | glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] | [more] |
| KAG6577707.1 | 5.6e-39 | 81.82 | hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1E5Z3 | 6.7e-46 | 80.45 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch... | [more] |
| A0A6J1L823 | 1.3e-44 | 78.60 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... | [more] |
| A0A0A0L3Y5 | 7.9e-39 | 77.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1 | [more] |
| A0A6J1E9J4 | 1.9e-37 | 77.91 | glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... | [more] |
| A0A1S4DY03 | 1.4e-27 | 75.69 | glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
