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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACGAGTAGAAGTCGCGATTACACAATGAGTAAGAGGTTGGGATCAAGAGAGATGAATGGAACATTGAGGTTGGAAGAAAACGAATTGGGAGTGAGAATGAATATATTGGAATACTTCCCGAGAGAAGAAGTGAAGAAGGTGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAGAAATGAAACAAAGAGAACAAGAATGAAGAGAGCTTCAAAGGAAGAAATATTTCATATAGAATGGGAAATTGAAGGAAAAGGGTACGTGGTTGGAGACCAAATTGCAATGTATTGGGACACAACTAACAAGAGATTGTGTTACCAAATCTTTCCAAATTCACCTCTTAGAAATGATCTTGCCAAAAGTTTGGCAACATCCTCTTCTTCCTCCTCTTTTAGAAGATAA mRNA sequence ATGACGAGTAGAAGTCGCGATTACACAATGAGTAAGAGGTTGGGATCAAGAGAGATGAATGGAACATTGAGGTTGGAAGAAAACGAATTGGGAGTGAGAATGAATATATTGGAATACTTCCCGAGAGAAGAAGTGAAGAAGGTGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAGAAATGAAACAAAGAGAACAAGAATGAAGAGAGCTTCAAAGGAAGAAATATTTCATATAGAATGGGAAATTGAAGGAAAAGGGTACGTGGTTGGAGACCAAATTGCAATGTATTGGGACACAACTAACAAGAGATTGTGTTACCAAATCTTTCCAAATTCACCTCTTAGAAATGATCTTGCCAAAAGTTTGGCAACATCCTCTTCTTCCTCCTCTTTTAGAAGATAA Coding sequence (CDS) ATGACGAGTAGAAGTCGCGATTACACAATGAGTAAGAGGTTGGGATCAAGAGAGATGAATGGAACATTGAGGTTGGAAGAAAACGAATTGGGAGTGAGAATGAATATATTGGAATACTTCCCGAGAGAAGAAGTGAAGAAGGTGATGAAAGATGCTGGAAATGGAATTCAAATCACTATTTTTGATGAGACAAGAAATGAAACAAAGAGAACAAGAATGAAGAGAGCTTCAAAGGAAGAAATATTTCATATAGAATGGGAAATTGAAGGAAAAGGGTACGTGGTTGGAGACCAAATTGCAATGTATTGGGACACAACTAACAAGAGATTGTGTTACCAAATCTTTCCAAATTCACCTCTTAGAAATGATCTTGCCAAAAGTTTGGCAACATCCTCTTCTTCCTCCTCTTTTAGAAGATAA Protein sequence MTSRSRDYTMSKRLGSREMNGTLRLEENELGVRMNILEYFPREEVKKVMKDAGNGIQITIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWDTTNKRLCYQIFPNSPLRNDLAKSLATSSSSSSFRR
Homology
BLAST of ClCG10G000680 vs. NCBI nr
Match: KAG6575830.1 (hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11 Identity = 37/110 (33.64%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 7 DYTMSKRLGSREMNGTLRLEEN--ELGVRMNILEYFPREEVKKVMKDAGNGIQITIFDET 66
D+TM K+L +MNG L+L E+ + +R N+ ++PR +V+ + + G+ ++I ++D
Sbjct: 4 DWTMIKKLEDADMNGLLQLREDDEDADIRANLFNWWPRSKVRDLKRVVGSEVRIILYDVN 63
Query: 67 RNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWDTTNKRLCYQI 115
++ +T M+ +HIEW+I+ K Y GD + M+WD RL Y+I
Sbjct: 64 MDQAIQTTMRWLGMAR-YHIEWDIQNKPYSSGDDMLMFWDLRYNRLAYKI 112
BLAST of ClCG10G000680 vs. NCBI nr
Match: KAG6575832.1 (hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.3 bits (186), Expect = 2.4e-10 Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 0
Query: 1 MTSRSRDYTMSKRLGSREMNGTLRLEENEL--GVRMNILEYFPREEVKKVMKDAGNGIQI 60
MT R +TM K+L +MNG L+L E+++ + N+ ++ R +V+ + K GN +I
Sbjct: 1 MTER---WTMIKKLQEADMNGLLQLREDDVDTDINTNLFRWWSRSKVRDLKKQIGNEAKI 60
Query: 61 TIFDETRNETKRTRMKRASKEEIFHIEWEIEGKGYVVGDQIAMYWDTTNKRLCYQI 115
T+FDE NE T ++ +HIEW+++ K Y G + M WD RL Y++
Sbjct: 61 TLFDENTNEVMHTTIRWLGTPR-YHIEWDVKNKPYASGQDMLMGWDLKYNRLAYKV 112
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG6575830.1 | 8.2e-11 | 33.64 | hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6575832.1 | 2.4e-10 | 34.48 | hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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