ClCG09G014380 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G014380
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 25614240 .. 25615542 (-)
RNA-Seq ExpressionClCG09G014380
SyntenyClCG09G014380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACCACCGTTGCGTGGTGGTACACGTGGAGGAACGTCAGCCGTTTGATGGAGCCGCTTAAGATGATCAAGAACGTGTCGATGAACTCGAGGATCTTGGAGAGGTAGAAGACGTAAGCCCAGAAGAAGAGGGGCCCACGTGGAGGGGTTTTGGGAGGAAGACAGAGGATGTAGTGGAGGTGAGGCGCGTGGGAGAAAGTGGAGAGACTGCATCCGAGGGCCATTGTGAAAGAGAGAGCGAGGAGGATAAGGTTATGGACGGCGGAGATTCGTTTGAGAATGGTGGGAGGGAGGAGAGGGAGGGAGAGGTTGGAGAGGAGGAAGGTCAGAGAGAGGTAGGAGAGGACTGTGAGAGTCAGGAAAAGTGGGGAAGAACCTAAGGTTTCGCCTTGAGACCATGAGAAATTGAGGATTTTGGGATGGTTTACAAGCCAGTAAGAGATGCTATCGGTCATGTTTACACTCATTTTTCAACTACACAAGGACTGGTGGTAGTGGTGGTGATACTGGTGAGGAAACAAAAGGGAAACAGGGAAGGGGTATAAATTACAACCCAAATGTGTATGCTAATGTTTTTGGGGCTCCTCCAGCTGGAAACATGTCAGCCTTTTGTATTGGGCAGCTCAATATTTATAACCCATCTACAGCAAAACACAACCCTTCTCCACTACAAATGGACTACCCTTTTCTCTTGAAATTAGTGAAAAGAGATGGGCACTTTGATGCCTATAATTAAGATGAAAGAGAGAACGAAACGGCTACTGTCATTGTAGAATGGGGAAACTTACTACTTACTTTCTTCTCATCTACCCTTTTAATTATATCCCTTTAATGTTTTCTCTCAAAATAGCACTCTATTTTTCCACTTAAATCATTCATTGGGATGTGGTTCATAGGGATGGAAGTGTCACTTTGAGATTTGTTGAACTCAATGCATGTTTTCTATCTGAAGATAGAAATCATTGTGGGTTTTTTGGGCAAGAGTGATATGATACACATGTTGTTACTAGAGATGGAAGTGTCGTTTGATTTGAGATGATTGGAGTGAATGTTTCCTATATAGGTATAGTGAACTTAAAATTTCCCACACAATAGTGTAATATGATTCTCTATTTCTAGCATAAGTTTTCATGACTGACTTTTAATTACAACTTAATTATTTAAGTGTATGTTCCTTGCCCAATCATGGATGACATTCTACGATAATAGACACCAACTATTCTTTATCGTTTCATATAAGTTTAAATTTCAAGTTTAGTTTGAACTTTCAATTTTTTATTTATAGTATTCTAAATCTTAA

mRNA sequence

ATGATCACCACCGTTGCGTGGTGGTACACGTGGAGGAACGTCAGCCAACGTGTCGATGAACTCGAGGATCTTGGAGAGGTAGAAGACGTAAGCCCAGAAGAAGAGGGGCCCACGTGGAGGGGTTTTGGGAGGAAGACAGAGGATGTAGTGGAGGTGAGGCGCGTGGGAGAAAGTGGAGAGACTGCATCCGAGGGCCATTGTGAAAGAGAGAGCGAGGAGGATAAGGTTATGGACGGCGGAGATTCGTTTGAGAATGGTGGGAGGGAGGAGAGGGAGGGAGAGGTTGGAGAGGAGGAAGGTCAGAGAGAGTATTCTAAATCTTAA

Coding sequence (CDS)

ATGATCACCACCGTTGCGTGGTGGTACACGTGGAGGAACGTCAGCCAACGTGTCGATGAACTCGAGGATCTTGGAGAGGTAGAAGACGTAAGCCCAGAAGAAGAGGGGCCCACGTGGAGGGGTTTTGGGAGGAAGACAGAGGATGTAGTGGAGGTGAGGCGCGTGGGAGAAAGTGGAGAGACTGCATCCGAGGGCCATTGTGAAAGAGAGAGCGAGGAGGATAAGGTTATGGACGGCGGAGATTCGTTTGAGAATGGTGGGAGGGAGGAGAGGGAGGGAGAGGTTGGAGAGGAGGAAGGTCAGAGAGAGTATTCTAAATCTTAA

Protein sequence

MITTVAWWYTWRNVSQRVDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRRVGESGETASEGHCERESEEDKVMDGGDSFENGGREEREGEVGEEEGQREYSKS
Homology
BLAST of ClCG09G014380 vs. NCBI nr
Match: KAF7803644.1 (hypothetical protein G2W53_042755 [Senna tora])

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-15
Identity = 56/90 (62.22%), Postives = 63/90 (70.00%), Query Frame = 0

Query: 16  QRVDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRRV--GESGETASEGHCERESEE 75
           +RVDE ED GEVEDV PEEE    RG GR+ ED  EVR V  GE GE ASEGH E E EE
Sbjct: 130 ERVDEFEDFGEVEDVGPEEEWAGGRGVGREAEDPAEVRSVGGGEGGEDASEGHEEGEEEE 189

Query: 76  DKVMDGGDSFENGGREEREGEVGEEEGQRE 104
           ++V+DGGD  E  GR+ REGE GEEE + E
Sbjct: 190 EEVVDGGDGLEEAGRKGREGEEGEEESEGE 219

BLAST of ClCG09G014380 vs. NCBI nr
Match: KAB5563744.1 (hypothetical protein DKX38_003798 [Salix brachista])

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-07
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  VDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRR--VGESGETASEGHCERESEEDK 77
           VD+ ++ GEVE V PE+E P WRG GR+  DV EVR    G+ GE A++GH E E EE +
Sbjct: 39  VDKFKNFGEVEYVGPEKERPGWRGVGREANDVAEVRAGGGGDDGEGAAKGHDEGEKEEGE 98

Query: 78  VMDGGDSFENGGREE--REGEVGEEEGQRE 104
            ++G D FE+ G  E  RE + GE+E + E
Sbjct: 99  AVEGCDGFEDVGSSEGRRERDSGEKECEEE 128

BLAST of ClCG09G014380 vs. NCBI nr
Match: KZV27251.1 (hypothetical protein F511_04704 [Dorcoceras hygrometricum])

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 16  QRVDELEDLGEVEDVSPEEEGPTWRGFGR-KTEDVVEV--RRVGESGETASEGHCERESE 75
           Q VDE EDLGEVE V PEE G +WRG    +     EV  RR+ E GE A++ H E E  
Sbjct: 124 QGVDEFEDLGEVEHVGPEEGGSSWRGVVEWEANGPAEVVGRRLVEGGEGAADDHEEGEEA 183

Query: 76  EDKVMDGGDSFENGGRE 90
           ED+V+ GGD  E GGR+
Sbjct: 184 EDEVVGGGDEAERGGRD 200

BLAST of ClCG09G014380 vs. NCBI nr
Match: KAF9860199.1 (hypothetical protein H0E87_029983 [Populus deltoides])

HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 18  VDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRR--VGESGETASEGHCERESEEDK 77
           VD+ ++LGEVE V PE+E P  RG GR+  DVVEVR    GE GE A++GH E E EED+
Sbjct: 69  VDKFKNLGEVEYVGPEKERPRLRGVGREANDVVEVRAGGGGEDGEGAAKGHDEGEKEEDE 128

Query: 78  VMDGGDSFENGGREE--REGEVGEEEGQRE 104
            ++G D F++    E  RE + GE+E + E
Sbjct: 129 AVEGCDWFDDVRSSEGRRERDSGEKECEEE 158

BLAST of ClCG09G014380 vs. NCBI nr
Match: KAF9685026.1 (hypothetical protein SADUNF_Sadunf03G0011500 [Salix dunnii])

HSP 1 Score: 62.0 bits (149), Expect = 3.6e-06
Identity = 43/90 (47.78%), Postives = 56/90 (62.22%), Query Frame = 0

Query: 18  VDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRR--VGESGETASEGHCERESEEDK 77
           VD+ ++ GEVE V PE+E P WRG GR+  DVVEVR    G+ GE A +GH E E EE +
Sbjct: 39  VDKFKNFGEVEYVGPEKERPRWRGVGREANDVVEVRAGGGGDDGEGAPKGHDEGEKEEHE 98

Query: 78  VMDGGDSFENGGREE--REGEVGEEEGQRE 104
            ++G   FE+ G  E  RE   GE+E + E
Sbjct: 99  AVEGCHWFEDVGSSEGRRERNSGEKECEEE 128

BLAST of ClCG09G014380 vs. ExPASy TrEMBL
Match: A0A5N5N8S1 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003798 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  VDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRR--VGESGETASEGHCERESEEDK 77
           VD+ ++ GEVE V PE+E P WRG GR+  DV EVR    G+ GE A++GH E E EE +
Sbjct: 39  VDKFKNFGEVEYVGPEKERPGWRGVGREANDVAEVRAGGGGDDGEGAAKGHDEGEKEEGE 98

Query: 78  VMDGGDSFENGGREE--REGEVGEEEGQRE 104
            ++G D FE+ G  E  RE + GE+E + E
Sbjct: 99  AVEGCDGFEDVGSSEGRRERDSGEKECEEE 128

BLAST of ClCG09G014380 vs. ExPASy TrEMBL
Match: A0A2Z7AZC9 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_04704 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 16  QRVDELEDLGEVEDVSPEEEGPTWRGFGR-KTEDVVEV--RRVGESGETASEGHCERESE 75
           Q VDE EDLGEVE V PEE G +WRG    +     EV  RR+ E GE A++ H E E  
Sbjct: 124 QGVDEFEDLGEVEHVGPEEGGSSWRGVVEWEANGPAEVVGRRLVEGGEGAADDHEEGEEA 183

Query: 76  EDKVMDGGDSFENGGRE 90
           ED+V+ GGD  E GGR+
Sbjct: 184 EDEVVGGGDEAERGGRD 200

BLAST of ClCG09G014380 vs. ExPASy TrEMBL
Match: A0A6N2MM41 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS392390 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-06
Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 18  VDELEDLGEVEDVSPEEEGPTWRGFGRKTEDVVEVRR--VGESGETASEGHCERESEEDK 77
           VD+ ++ GEVE V PE+E P WRG GR+  DV EVR    G+ GE A++GH E + EE +
Sbjct: 39  VDKFKNFGEVEYVGPEKERPGWRGVGREANDVAEVRAGGGGDDGEGAAKGHDEGDKEEGE 98

Query: 78  VMDGGDSFENGG--REEREGEVGEEEGQRE 104
            ++G D FE+ G  +  RE + GE+E + E
Sbjct: 99  AVEGCDWFEDVGSSKGRRERDSGEKECEEE 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF7803644.11.1e-1562.22hypothetical protein G2W53_042755 [Senna tora][more]
KAB5563744.13.3e-0747.78hypothetical protein DKX38_003798 [Salix brachista][more]
KZV27251.12.1e-0651.95hypothetical protein F511_04704 [Dorcoceras hygrometricum][more]
KAF9860199.12.8e-0648.89hypothetical protein H0E87_029983 [Populus deltoides][more]
KAF9685026.13.6e-0647.78hypothetical protein SADUNF_Sadunf03G0011500 [Salix dunnii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5N5N8S11.6e-0747.78Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003798 PE=4 SV=1[more]
A0A2Z7AZC91.0e-0651.95Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_04704 PE=4... [more]
A0A6N2MM412.3e-0645.56Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS392390 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G014380.1ClCG09G014380.1mRNA