ClCG09G012340 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G012340
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ATP synthase subunit alpha, chloroplastic
Location	CG_Chr09: 14030014 .. 14030542 (-)
RNA-Seq Expression	ClCG09G012340
Synteny	ClCG09G012340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACCATTCGAGCAGATGAAATTAGTAATATTATCCGTGAACATATTGAGCAATATGATAGAGAAGTCAAAATTGTGAATACTGGTACTGTACTTCAAGTAGGTGATGGCATTGCTCATATTTATAGTCTTGATGAAGTAATGACAGGTGAATTAGTAGAATTTGAAGAGGGTACTATAGGCATAACTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATTAATGGGTGGTTTGCTGATACACAAGAGGGAAGTTCTGTAAAAGCAATGGGAAGAGTTGCTCAGATACCAGTCTGGGTCGAAATATGGCTTTCAAATTAAGTTATGAATTAGTGGATGTTGCCAACAAGAGTGGTGATGCCATACATAAAAAGGAGGAGACTCATAGAATGGTAAGGCAAATAGAGCTTTTGCACATTTTTGTTAATCCATGAACAAGATCTATATAGACACATAGGCCCATGGATCCATACATCTCGATCAGAAAAGAATCAATAGAAAAAGAAAGAATCAGAATTGATTGA

mRNA sequence

ATGGTAACCATTCGAGCAGATGAAATTAGTAATATTATCCGTGAACATATTGAGCAATATGATAGAGAAGTCAAAATTGTGAATACTGGTACTGTACTTCAAGTAGGTGATGGCATTGCTCATATTTATAGTCTTGATGAAGTAATGACAGGTGAATTAGTAGAATTTGAAGAGGGTACTATAGGCATAACTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATTAATGGGTGGTTTGCTGATACACAAGAGGGAAGTTCTCAATGGGAAGAGTTGCTCAGATACCAGTCTGGGTCGAAATATGGCTTTCAAATTAAGTTATGAATTAGTGGATGTTGCCAACAAGAGTGGTGATGCCATACATAAAAAGGAGGAGACTCATAGAATGACACATAGGCCCATGGATCCATACATCTCGATCAGAAAAGAATCAATAGAAAAAGAAAGAATCAGAATTGATTGA

Coding sequence (CDS)

ATGGTAACCATTCGAGCAGATGAAATTAGTAATATTATCCGTGAACATATTGAGCAATATGATAGAGAAGTCAAAATTGTGAATACTGGTACTGTACTTCAAGTAGGTGATGGCATTGCTCATATTTATAGTCTTGATGAAGTAATGACAGGTGAATTAGTAGAATTTGAAGAGGGTACTATAGGCATAACTCTAAATTTAGAATCAAATAATGTTGGTGTTGTATTAATGGGTGGTTTGCTGATACACAAGAGGGAAGTTCTCAATGGGAAGAGTTGCTCAGATACCAGTCTGGGTCGAAATATGGCTTTCAAATTAAGTTATGAATTAGTGGATGTTGCCAACAAGAGTGGTGATGCCATACATAAAAAGGAGGAGACTCATAGAATGACACATAGGCCCATGGATCCATACATCTCGATCAGAAAAGAATCAATAGAAAAAGAAAGAATCAGAATTGATTGA

Protein sequence

MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGTIGITLNLESNNVGVVLMGGLLIHKREVLNGKSCSDTSLGRNMAFKLSYELVDVANKSGDAIHKKEETHRMTHRPMDPYISIRKESIEKERIRID

Homology

[Close]

BLAST of ClCG09G012340 vs. NCBI nr
Match: DAD29483.1 (TPA_asm: hypothetical protein HUJ06_030951 [Nelumbo nucifera])

HSP 1 Score: 144.8 bits (364), Expect = 6.1e-31
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA I+ LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKREVL--NGKSCSDT 97
          IGI LNLESNNVGVVLMG GL+I +   +  N  +CSDT
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQEGNSIKANRMNCSDT 99

[Close]

BLAST of ClCG09G012340 vs. NCBI nr
Match: PHU09444.1 (Photosystem II protein D1 [Capsicum chinense])

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-30
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIREHIEQY+REVKIVNTGTVLQVGDGIA I+ LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIREHIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVL+G GLLI +R
Sbjct: 61 IGIALNLESNNVGVVLIGDGLLIQER 86

[Close]

BLAST of ClCG09G012340 vs. NCBI nr
Match: YP_009509914.1 (ATP synthase CF1 alpha subunit [Corylus ferox var. thibetica] >AXF46646.1 ATP synthase CF1 alpha subunit [Corylus ferox var. thibetica])

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. NCBI nr
Match: YP_009318069.1 (ATP synthase CF1 alpha subunit [Corylus fargesii] >YP_009318148.1 ATP synthase CF1 alpha subunit [Corylus avellana] >YP_009318225.1 ATP synthase CF1 alpha subunit [Corylus heterophylla] >YP_009331465.1 ATP synthase CF1 alpha subunit [Corylus chinensis] >YP_009509831.1 ATP synthase CF1 alpha subunit [Corylus mandshurica] >YP_009509997.1 ATP synthase CF1 alpha subunit [Corylus yunnanensis] >YP_009559724.1 ATP synthase CF1 alpha subunit [Corylus wangii] >YP_009714763.1 ATP synthase CF1 alpha subunit [Corylus americana] >YP_009714847.1 ATP synthase CF1 alpha subunit [Corylus ferox] >YP_009714931.1 ATP synthase CF1 alpha subunit [Corylus sieboldiana] >YP_009715015.1 ATP synthase CF1 alpha subunit [Corylus colurna] >YP_009715099.1 ATP synthase CF1 alpha subunit [Corylus jacquemontii] >YP_009715183.1 ATP synthase CF1 alpha subunit [Corylus cornuta] >AXZ70272.1 ATP synthase CF1 alpha subunit [Corylus heterophylla var. sutchuenensis] >QGK87235.1 ATP synthase CF1 alpha subunit [Corylus ferox var. thibetica] >QGK87319.1 ATP synthase CF1 alpha subunit [Corylus kweichowensis var. brevipes] >QGK87739.1 ATP synthase CF1 alpha subunit [Corylus cornuta var. californica] >QXQ00392.1 ATP synthase CF1 alpha subunit [Corylus kweichowensis])

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. NCBI nr
Match: YP_009967243.1 (ATP synthase CF1 alpha subunit [Anthurium huixtlense] >QIP53297.1 ATP synthase CF1 alpha subunit [Anthurium huixtlense])

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-30
Identity = 79/107 (73.83%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 1   MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
           MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA I+ LDEVM GELVEFEEGT
Sbjct: 1   MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61  IGITLNLESNNVGVVLMG-GLLIHKREVLNGK------SCSDTSLGR 101
           IGI LNLESNNVGVVLMG GL+I +R  +         S S+  LGR
Sbjct: 61  IGIALNLESNNVGVVLMGDGLMIQERSSVKATGRIAQISVSEAYLGR 107

[Close]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot
Match: Q49L13 (ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=atpA PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GL+I +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQE 85

[Close]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot
Match: B1NWD5 (ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GL+I +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQE 85

[Close]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot
Match: Q14FH2 (ATP synthase subunit alpha, chloroplastic OS=Populus alba OX=43335 GN=atpA PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GL+I +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQE 85

[Close]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot
Match: A4GYP3 (ATP synthase subunit alpha, chloroplastic OS=Populus trichocarpa OX=3694 GN=atpA PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GL+I +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQE 85

[Close]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot
Match: Q8S8Y3 (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-32
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVKIVNTGTVLQVGDGIA I+ LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GLLI +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLLIQE 85

[Close]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL
Match: A0A2G3BSI9 (Photosystem II protein D1 OS=Capsicum chinense OX=80379 GN=BC332_21304 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.6e-31
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIREHIEQY+REVKIVNTGTVLQVGDGIA I+ LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIREHIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVL+G GLLI +R
Sbjct: 61 IGIALNLESNNVGVVLIGDGLLIQER 86

[Close]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL
Match: A0A385KBW2 (ATP synthase subunit alpha, chloroplastic OS=Corylus heterophylla var. sutchuenensis OX=126982 GN=atpA PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL
Match: A0A345BAT7 (ATP synthase subunit alpha, chloroplastic OS=Corylus mandshurica OX=139401 GN=atpA PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL
Match: A0A1I9RG22 (ATP synthase subunit alpha, chloroplastic OS=Corylus avellana OX=13451 GN=atpA PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL
Match: A0A1I9RFU2 (ATP synthase subunit alpha, chloroplastic OS=Corylus fargesii OX=554072 GN=atpA PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REVK+VNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHKR 86
          IGI LNLESNNVGVVLMG GL+I +R
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQER 86

[Close]

BLAST of ClCG09G012340 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 74/85 (87.06%), Postives = 77/85 (90.59%), Query Frame = 0


Query: 1  MVTIRADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGT 60
          MVTIRADEISNIIRE IEQY+REV IVNTGTVLQVGDGIA IY LDEVM GELVEFEEGT
Sbjct: 1  MVTIRADEISNIIRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDEVMAGELVEFEEGT 60

Query: 61 IGITLNLESNNVGVVLMG-GLLIHK 85
          IGI LNLESNNVGVVLMG GL+I +
Sbjct: 61 IGIALNLESNNVGVVLMGDGLMIQE 85

[Close]

BLAST of ClCG09G012340 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 5   RADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGTIGIT 64
           RA E++N+    I  +    ++   G V+ VGDGIA +Y L+E+  GE+V F  G  G+ 
Sbjct: 276 RAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMA 335

Query: 65  LNLESNNVGVVLMGG 80
           LNLE+ NVG+V+ GG
Sbjct: 336 LNLENENVGIVVFGG 350

[Close]

BLAST of ClCG09G012340 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 5  RADEISNIIREHIEQYDREVKIVNTGTVLQVGDGIAHIYSLDEVMTGELVEFEEGTIGIT 64
          RA E++N+    I  +    ++   G V+ VGDGIA +Y L+E+  GE+V F  G  G+ 
Sbjct: 6  RAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNEIQAGEMVLFANGVKGMA 65

Query: 65 LNLESNNVGVVLMGG 80
          LNLE+ NVG+V+ GG
Sbjct: 66 LNLENENVGIVVFGG 80

[Close]

BLAST of ClCG09G012340 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 99  GRNMAFKLSYELVDVANKSGDAIHKKEETHRM 131
           GRNMAFKLS ELVD A  SGDAI KKEETHRM
Sbjct: 113 GRNMAFKLSSELVDAAKGSGDAIRKKEETHRM 144

[Close]

BLAST of ClCG09G012340 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 99  GRNMAFKLSYELVDVANKSGDAIHKKEETHRM 131
           GRNMAFKLS ELVD A  SGDAI KKEETHRM
Sbjct: 113 GRNMAFKLSSELVDAAKGSGDAIRKKEETHRM 144

The following BLAST results are available for this feature:

BLAST of ClCG09G012340 vs. NCBI nr


Match Name	E-value	Identity	Description
DAD29483.1	6.1e-31	79.80	TPA_asm: hypothetical protein HUJ06_030951 [Nelumbo nucifera]	[more]
PHU09444.1	1.4e-30	88.37	Photosystem II protein D1 [Capsicum chinense]	[more]
YP_009509914.1	2.3e-30	87.21	ATP synthase CF1 alpha subunit [Corylus ferox var. thibetica] >AXF46646.1 ATP sy...	[more]
YP_009318069.1	2.3e-30	87.21	ATP synthase CF1 alpha subunit [Corylus fargesii] >YP_009318148.1 ATP synthase C...	[more]
YP_009967243.1	3.0e-30	73.83	ATP synthase CF1 alpha subunit [Anthurium huixtlense] >QIP53297.1 ATP synthase C...	[more]

BLAST of ClCG09G012340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49L13	8.8e-33	88.24	ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus...	[more]
B1NWD5	8.8e-33	88.24	ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA P...	[more]
Q14FH2	8.8e-33	88.24	ATP synthase subunit alpha, chloroplastic OS=Populus alba OX=43335 GN=atpA PE=3 ...	[more]
A4GYP3	8.8e-33	88.24	ATP synthase subunit alpha, chloroplastic OS=Populus trichocarpa OX=3694 GN=atpA...	[more]
Q8S8Y3	2.0e-32	88.24	ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA ...	[more]

BLAST of ClCG09G012340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G3BSI9	6.6e-31	88.37	Photosystem II protein D1 OS=Capsicum chinense OX=80379 GN=BC332_21304 PE=3 SV=1	[more]
A0A385KBW2	1.1e-30	87.21	ATP synthase subunit alpha, chloroplastic OS=Corylus heterophylla var. sutchuene...	[more]
A0A345BAT7	1.1e-30	87.21	ATP synthase subunit alpha, chloroplastic OS=Corylus mandshurica OX=139401 GN=at...	[more]
A0A1I9RG22	1.1e-30	87.21	ATP synthase subunit alpha, chloroplastic OS=Corylus avellana OX=13451 GN=atpA P...	[more]
A0A1I9RFU2	1.1e-30	87.21	ATP synthase subunit alpha, chloroplastic OS=Corylus fargesii OX=554072 GN=atpA ...	[more]

BLAST of ClCG09G012340 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00120.1	3.1e-33	87.06	ATP synthase subunit alpha	[more]
AT2G07698.1	1.4e-12	42.67	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	1.4e-12	42.67	ATP synthase subunit 1	[more]
ATCG01240.1	5.9e-08	84.38	ribosomal protein S7	[more]
ATCG00900.1	5.9e-08	84.38	Ribosomal protein S7p/S5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036823	Ribosomal protein S7 domain superfamily	GENE3D	1.10.455.10	Ribosomal protein S7 domain	coord: 93..133 e-value: 4.8E-7 score: 31.6
IPR036823	Ribosomal protein S7 domain superfamily	SUPERFAMILY	47973	Ribosomal protein S7	coord: 98..130
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 99..131 e-value: 7.7E-7 score: 28.9
IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	GENE3D	2.40.30.20		coord: 2..92 e-value: 7.5E-27 score: 94.9
IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	PFAM	PF02874	ATP-synt_ab_N	coord: 29..79 e-value: 1.7E-12 score: 47.7
None	No IPR available	PANTHER	PTHR48082:SF5	ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC	coord: 2..139
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 2..139
None	No IPR available	CDD	cd18116	ATP-synt_F1_alpha_N	coord: 28..78 e-value: 2.29989E-21 score: 79.8049
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 11..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G012340.1	ClCG09G012340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism