ClCG09G005850 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G005850
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S ribosomal protein L22-2
Location	CG_Chr09: 5037338 .. 5039120 (-)
RNA-Seq Expression	ClCG09G005850
Synteny	ClCG09G005850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTACCCGTTATTTTGTATTTGGTAATAATTGTTGTATATTCTGGATGAGTTTTCTTCGTGCGCTTGTTGATTTGGCTGGGTATAAGCGTTGGATTACTCTGCTAGCTGCGGCAGTAGTACTGAAATACAAGCATTGTGCCGATCGATCTTTGTTTTCTGTGATTTCGTTGTAAATTTGTTGCATATTGTATTGGATTGTGGAATTGGTCAACATTATTGGGATTTATTGTACGAATTGATCTGAGATTTCAGCCATGTTTTAGTGTAAACGGGAAAGTTACTTCTTCAAGAAGTACTCGTTTATCTCATACTAGTTCTTCCTCTTCGTGTTGTTGATTTCGAGTGCATTCTGATTTCTGGGTCATTTTTATTTTATCGTTTGTGAAGTTCTTAAATGTCCTTATTTGGAATACACCTCTGATCTATTGTAATCGAGGGACTCGTTAAGGATTTTACTTGTCTGCTTATGCATTTCTCAATTAACCACCTTTTGTAGTTGTAACGCTTTATGTATCCTTTATATTTTTATGGTTCCATTTTCTGGACGAACTTAGAATTATATGTGTGGGTTCTGAAAGAAGGAAGGCGATCTTGCTCTTTAAGTTATGACTGTTTTGTTGGAGAATACGCTCGTAAACTCCTAATCAACTTTGTTGATGGTTCTCTCTGTTGAATTCCAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGTGAGGAAGAAGACTGAGGTTAAAATCCCTATATTTTGGAAGCAGTGTTTGCTGTAGGATTAGTTGTAGCGGCCTTTCTCATATTAAACGTTGTTGAAATTATATTTCCATACCTTGTCTTGAAGCTTCCCATATAAAACATAGCAAGAACTCTCAGAGTTATGAGATGATGCGACTCTTGTCTATTTCTGAGGTTTTAATATCTATAAATTTTGCTCACGTAGCTCCCTTCTTTTGGTTGGTTTGAAGATACTTTTCTTACTCTGAGAGTATGGTTGTTGTCTTGGCAAAGTGATATAATTTGTATTTGGTTCGAAGAATTGAAATTTCGACTTCCTCGTAAGAATATGCCACTTCGCAACCATAATAATTACTTCGAAGAAGGTTGAGAAAACACTAAACTTTTAGTCACCTTTTTTTTTAAAATTTTTTTATTCATGTTCATATGAGTTGATTTGTTGTACTTCCGGCTTCAAAGGAAGTCTGTCTGTTCTATACTATCTATTTGGCACGCTTTTAAATGATGAGAAACATTATTTTGATACTTTCAAAAGAAAATTGGCTAATTGTTCTTCTTGGGTTAAAATTTAATTTTGACTCCTAGTCCCTAAATTTCTAGAAGTTGCGATTCAGTCTTAAATGATTAGTACAGTTGACAAGAATTCAGTCCTTTTTCTAAAATTCCTGTCAACTTGCCTGTCTTCTTTCTTTACTAGGGGGATTTTGCCTGCTTCATTAA

mRNA sequence

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGGGGATTTTGCCTGCTTCATTAA

Coding sequence (CDS)

ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCGTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATAGCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTATGAATTGAGATACTTCAATATTGCCGAGAACGAGGGGGGATTTTGCCTGCTTCATTAA

Protein sequence

MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGGFCLLH

Homology

[Close]

BLAST of ClCG09G005850 vs. NCBI nr
Match: XP_004136027.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >XP_022155135.1 60S ribosomal protein L22-2 [Momordica charantia] >XP_038896853.1 60S ribosomal protein L22-2-like [Benincasa hispida] >KAA0067992.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa] >KGN44943.1 hypothetical protein Csa_015937 [Cucumis sativus] >TYK18135.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 6.8e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. NCBI nr
Match: XP_023548993.1 (60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. NCBI nr
Match: XP_022991268.1 (60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. NCBI nr
Match: XP_022960081.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >KAG6593201.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.4 bits (607), Expect = 3.4e-59
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGSTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. NCBI nr
Match: XP_022953729.1 (60S ribosomal protein L22-2-like [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.5e-51
Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 120

[Close]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.9e-50
Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 119

Query: 121 E 122
           E
Sbjct: 121 E 119

[Close]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.0e-42
Identity = 86/124 (69.35%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGGF 125
              +
Sbjct: 121 VASY 124

[Close]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot
Match: Q98TF8 (60S ribosomal protein L22 OS=Gallus gallus OX=9031 GN=RPL22 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.2e-31
Identity = 74/117 (63.25%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 6   AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRD 65
           AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R 
Sbjct: 8   AAKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERS 67

Query: 66  KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 122
           K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E
Sbjct: 68  KSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDE 121

[Close]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 9.0e-31
Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 7   ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDK 66
           A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 67  NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 122
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDE 121

[Close]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL
Match: A0A5D3D2W6 (60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00650 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL
Match: A0A0A0K637 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL
Match: A0A6J1DLK6 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL
Match: A0A1S3BRQ9 (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL
Match: A0A6J1JVR1 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 122

[Close]

BLAST of ClCG09G005850 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 202.2 bits (513), Expect = 2.5e-52
Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 120

[Close]

BLAST of ClCG09G005850 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 202.2 bits (513), Expect = 2.5e-52
Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 120

[Close]

BLAST of ClCG09G005850 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 202.2 bits (513), Expect = 2.5e-52
Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT
Sbjct: 1   MSRGGAAVA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 120

Query: 121 EG 123
           EG
Sbjct: 121 EG 120

[Close]

BLAST of ClCG09G005850 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-51
Identity = 100/121 (82.64%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV+
Sbjct: 1   MSRGNAAAA--KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAEN
Sbjct: 61  ITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAEN 119

Query: 121 E 122
           E
Sbjct: 121 E 119

[Close]

BLAST of ClCG09G005850 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-43
Identity = 86/124 (69.35%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV+
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           +TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGGF 125
              +
Sbjct: 121 VASY 124

The following BLAST results are available for this feature:

BLAST of ClCG09G005850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136027.1	6.8e-60	100.00	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S rib...	[more]
XP_023548993.1	1.5e-59	99.18	60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ...	[more]
XP_022991268.1	3.4e-59	98.36	60S ribosomal protein L22-2-like [Cucurbita maxima]	[more]
XP_022960081.1	3.4e-59	99.18	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S riboso...	[more]
XP_022953729.1	1.7e-58	98.36	60S ribosomal protein L22-2-like [Cucurbita moschata]	[more]

BLAST of ClCG09G005850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	3.5e-51	83.61	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	3.9e-50	82.64	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	3.0e-42	69.35	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
Q98TF8	5.2e-31	63.25	60S ribosomal protein L22 OS=Gallus gallus OX=9031 GN=RPL22 PE=2 SV=1	[more]
P47198	9.0e-31	62.93	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of ClCG09G005850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2W6	3.3e-60	100.00	60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0K637	3.3e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1	[more]
A0A6J1DLK6	3.3e-60	100.00	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 ...	[more]
A0A1S3BRQ9	3.3e-60	100.00	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1	[more]
A0A6J1JVR1	1.6e-59	98.36	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=...	[more]

BLAST of ClCG09G005850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	2.5e-52	83.61	Ribosomal L22e protein family	[more]
AT3G05560.2	2.5e-52	83.61	Ribosomal L22e protein family	[more]
AT3G05560.3	2.5e-52	83.61	Ribosomal L22e protein family	[more]
AT5G27770.1	2.7e-51	82.64	Ribosomal L22e protein family	[more]
AT1G02830.1	2.1e-43	69.35	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 16..121 e-value: 9.2E-46 score: 154.7
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..122
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 7..124 e-value: 6.9E-55 score: 186.1
None	No IPR available	PANTHER	PTHR10064:SF13	SUBFAMILY NOT NAMED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G005850.2	ClCG09G005850.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome