ClCG09G001530 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAAAAAAACGAGTATCTAGGCATGGTTTATGCCATGATCAGTATAGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACCCGTGCCTACTTCACCGTTGCTACCATGATCATAGCAGTCCTCACTAGAAACAAAATCTTTAGTTGGATCGCTACCATGGGGGAGGGGGTGTTCGATACAATACAAAACTCCCATCTTATTTGTTGTAGGGTCATCTTTTTGTTCACCATAGGAGGACTCATTGGAATAGTCCCGGCAATTCAAGGCTAGACATTGTTCTACATAATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCATTTTTGCTTTATTTGCAAGTGGGTAAAATCTTTGGTCGGACATACCCTGAAACTTTAAGTCAAATCCATTTTTGGATCACTTTTTTCGGGGTTAATGCGAAAAAACTTCTAAAACTATAAGGACTAACTTGAAATTAAGCCATTGAAACATTTTGGACCTATAAGATTTTTTCGTTTTTGAGTAGATTCAAGCCTTTTAACTTTTTGGCCGAAGTCATATGCCTTTAATCGTTTGTGTATGTTATAGATGGCTCGAAACATAGAGACACAGAGACCAAATTCAGTACTTTACCCAATATTTATGTCTGTTGAATCAACATGGAATCCACACACAAAAGAGAGAGTGAATAATAATTATTAGATGATTAGATCCATTATGGTCAGTGGTAGAATAAAGAATCTCTATGTTGTATTTGTTTATAGGTGATAATGGAATTGAAATGTTATTACAATGACTAGTAAAGTTTGTTTACTTTGATTTCAATTTTAGTTTCTATATTTTCAACAAATCTTAAATTATTGTATATTAGCATTTTATTGTTGTTCCAAAAACTTTTTTTTTCGTTATATATTAGCATTTTTACAATAAATCTTGAAAACCTACTTGCATATTATGTTTTGTTTCATAAAAATTATTATTATTCTTTAAATAATTTTCATAAATGTTAATTTTAGTGGACTCCAATAAGATCTCTTGACCATTAAAATTTGAGTACCAAAATTGAACAAACCCATACTTTGGGAATCAAAATAATATTTGAACAAATCATGTTGGTTGTAGATTATGCCTTATGGGGACACTGAACAACTAAGCATCTGAAGTTCCCGCCCCACCGCCTGCCGACAGCTTCAGAACCGCCGATCACTGCATTTTCCGGCAGCGATCGGAATCGGAAACCGAAAATTAGGGCATTTATCGAGGACGAGGATGAATCTTTGGTCAACTAA ATGAAGGAAAAAAACGAGTATCTAGGCATGGTTTATGCCATGATCAGTATAGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACCCGTGCCTACTTCACCGTTGCTACCATGATCATAGCAGTCCTCACTAGAAACAAAATCTTTAGTTGGATCGCTACCATGGGGGAGGGGATGGCTCGAAACATAGAGACACAGAGACCAAATTCACATCTGAAGTTCCCGCCCCACCGCCTGCCGACAGCTTCAGAACCGCCGATCACTGCATTTTCCGGCAGCGATCGGAATCGGAAACCGAAAATTAGGGCATTTATCGAGGACGAGGATGAATCTTTGGTCAACTAA ATGAAGGAAAAAAACGAGTATCTAGGCATGGTTTATGCCATGATCAGTATAGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACCCGTGCCTACTTCACCGTTGCTACCATGATCATAGCAGTCCTCACTAGAAACAAAATCTTTAGTTGGATCGCTACCATGGGGGAGGGGATGGCTCGAAACATAGAGACACAGAGACCAAATTCACATCTGAAGTTCCCGCCCCACCGCCTGCCGACAGCTTCAGAACCGCCGATCACTGCATTTTCCGGCAGCGATCGGAATCGGAAACCGAAAATTAGGGCATTTATCGAGGACGAGGATGAATCTTTGGTCAACTAA MKEKNEYLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNIETQRPNSHLKFPPHRLPTASEPPITAFSGSDRNRKPKIRAFIEDEDESLVN Homology
BLAST of ClCG09G001530 vs. NCBI nr
Match: ABN50285.1 (cytochrome oxidase subunit I, partial [Ephedra fragilis]) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19 Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. NCBI nr
Match: CAE46638.2 (cytochrome oxidase, subunit I [Solanum commersonii]) HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19 Identity = 54/61 (88.52%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of ClCG09G001530 vs. NCBI nr
Match: ABN50276.1 (cytochrome oxidase subunit I, partial [Ephedra intermedia]) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-19 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. NCBI nr
Match: ABN50284.1 (cytochrome oxidase subunit I, partial [Ephedra tweediana]) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-19 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. NCBI nr
Match: AAD01679.1 (cytochrome c oxidase, partial [Ephedra distachya]) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-19 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy Swiss-Prot
Match: Q33439 (Cytochrome c oxidase subunit 1 (Fragment) OS=Ephedra equisetifolia OX=49760 GN=COX1 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 5.6e-22 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy Swiss-Prot
Match: P68540 (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy Swiss-Prot
Match: P60620 (Cytochrome c oxidase subunit 1 OS=Arabidopsis thaliana OX=3702 GN=COX1 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy Swiss-Prot
Match: P24794 (Cytochrome c oxidase subunit 1 OS=Beta vulgaris OX=161934 GN=COX1 PE=3 SV=2) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy Swiss-Prot
Match: P08742 (Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2) HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy TrEMBL
Match: A0A452YPM1 (Cytochrome c oxidase subunit 1 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.4e-20 Identity = 55/61 (90.16%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy TrEMBL
Match: B6RAP6 (Cytochrome c oxidase subunit 1 (Fragment) OS=Ephedra fragilis OX=50295 GN=coxI PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19 Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy TrEMBL
Match: Q70G81 (Cytochrome c oxidase subunit 1 OS=Solanum commersonii OX=4109 GN=cox1 PE=3 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19 Identity = 54/61 (88.52%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy TrEMBL
Match: D0PPP4 (Cytochrome c oxidase subunit 1 (Fragment) OS=Asplenium wrightii OX=78456 GN=coxI PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. ExPASy TrEMBL
Match: B6RAP8 (Cytochrome c oxidase subunit 1 (Fragment) OS=Ephedra trifurca OX=39583 GN=coxI PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G001530 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase ) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22 Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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