Homology
BLAST of ClCG07G012030 vs. NCBI nr
Match:
KAF3624581.1 (DNA-directed RNA polymerase subunit beta [Capsicum annuum])
HSP 1 Score: 90.5 bits (223), Expect = 8.1e-15
Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P++D+ SVDM+FNPLGV SRMN+ I + L SLLDRHYR+VPF ER
Sbjct: 309 ILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVRQIFKCS--LGLAGSLLDRHYRIVPFDER 368
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSW-----------IFDGRT 86
Y Q+ASRKLV FS+LYEASK T++ W IFDGRT
Sbjct: 369 YEQEASRKLV-FSELYEASKQTSNPWGFEPEYPGKNRIFDGRT 408
BLAST of ClCG07G012030 vs. NCBI nr
Match:
AHM89856.1 (RNA polymerase beta subunit [Lagenaria siceraria])
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. NCBI nr
Match:
YP_009753166.1 (RNA polymerase subunit beta [Trichosanthes truncata] >QIT06238.1 RNA polymerase subunit beta [Trichosanthes truncata])
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. NCBI nr
Match:
YP_009752827.1 (RNA polymerase subunit beta [Baijiania yunnanensis] >QIT05899.1 RNA polymerase subunit beta [Baijiania yunnanensis])
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. NCBI nr
Match:
AHM88854.1 (RNA polymerase beta subunit, partial [Lagenaria siceraria])
HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 821 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 880
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 881 YEQEASRKLV-FSELYEASKQTASPWVFE 906
BLAST of ClCG07G012030 vs. ExPASy Swiss-Prot
Match:
Q4VZP1 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=2)
HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy Swiss-Prot
Match:
Q8S8X9 (DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB PE=3 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 6.9e-17
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P++D+ SVDM+FNPLGV SRMN+ I L SLLDRHYR+ PF ER
Sbjct: 833 ILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIAPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T + W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTANPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy Swiss-Prot
Match:
Q3C1G7 (DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris OX=4096 GN=rpoB PE=3 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 6.9e-17
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P++D+ SVDM+FNPLGV SRMN+ I L SLLDRHYR+ PF ER
Sbjct: 833 ILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIAPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T + W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTANPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy Swiss-Prot
Match:
Q33C46 (DNA-directed RNA polymerase subunit beta OS=Nicotiana tomentosiformis OX=4098 GN=rpoB PE=3 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 6.9e-17
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P++D+ SVDM+FNPLGV SRMN+ I L SLLDRHYR+ PF ER
Sbjct: 833 ILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIAPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T + W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTANPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy Swiss-Prot
Match:
Q2MIJ5 (DNA-directed RNA polymerase subunit beta OS=Solanum bulbocastanum OX=147425 GN=rpoB PE=3 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 6.9e-17
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P++D+ SVDM+FNPLGV SRMN+ I L SLLDRHYR+ PF ER
Sbjct: 833 ILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIAPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T + W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTANPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy TrEMBL
Match:
A0A218KG28 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus var. hardwickii OX=319220 GN=rpoB PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy TrEMBL
Match:
A0A6H0ETN6 (DNA-directed RNA polymerase subunit beta OS=Trichosanthes kirilowii OX=3677 GN=rpoB PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy TrEMBL
Match:
A0A1X9Q1B9 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy TrEMBL
Match:
A0A249RZI0 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. cantalupensis OX=3658 GN=rpoB PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. ExPASy TrEMBL
Match:
A0A1S4ETZ9 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=rpoB PE=3 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0
Query: 1 MFPKEDI-------SVDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGER 60
+ P+ED+ VDM+FNPLGV SRMN+ I L SLLDRHYR+VPF ER
Sbjct: 833 ILPREDMPYLQNGRPVDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIVPFDER 892
Query: 61 YVQKASRKLVFFSQLYEASKHTTSSWIFD 83
Y Q+ASRKLV FS+LYEASK T S W+F+
Sbjct: 893 YEQEASRKLV-FSELYEASKQTASPWVFE 918
BLAST of ClCG07G012030 vs. TAIR 10
Match:
ATCG00190.1 (RNA polymerase subunit beta )
HSP 1 Score: 85.5 bits (210), Expect = 2.4e-17
Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 9 VDMLFNPLGVLSRMNLVSIQRVHGYLNPTESLLDRHYRVVPFGERYVQKASRKLVFFSQL 68
VDM+FNPLGV SRMN+ I L SLLDRHYR+ PF ERY Q+ASRKLV FS+L
Sbjct: 850 VDMVFNPLGVPSRMNVGQIFECS--LGLAGSLLDRHYRIAPFDERYEQEASRKLV-FSEL 909
Query: 69 YEASKHTTSSWIFD 83
YEASK T + W+F+
Sbjct: 910 YEASKQTANPWVFE 920
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAF3624581.1 | 8.1e-15 | 53.40 | DNA-directed RNA polymerase subunit beta [Capsicum annuum] | [more] |
AHM89856.1 | 1.4e-14 | 57.30 | RNA polymerase beta subunit [Lagenaria siceraria] | [more] |
YP_009753166.1 | 1.4e-14 | 57.30 | RNA polymerase subunit beta [Trichosanthes truncata] >QIT06238.1 RNA polymerase ... | [more] |
YP_009752827.1 | 1.4e-14 | 57.30 | RNA polymerase subunit beta [Baijiania yunnanensis] >QIT05899.1 RNA polymerase s... | [more] |
AHM88854.1 | 1.4e-14 | 57.30 | RNA polymerase beta subunit, partial [Lagenaria siceraria] | [more] |
Match Name | E-value | Identity | Description | |
Q4VZP1 | 1.8e-17 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3... | [more] |
Q8S8X9 | 6.9e-17 | 55.06 | DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB P... | [more] |
Q3C1G7 | 6.9e-17 | 55.06 | DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris OX=4096 GN=rpoB... | [more] |
Q33C46 | 6.9e-17 | 55.06 | DNA-directed RNA polymerase subunit beta OS=Nicotiana tomentosiformis OX=4098 GN... | [more] |
Q2MIJ5 | 6.9e-17 | 55.06 | DNA-directed RNA polymerase subunit beta OS=Solanum bulbocastanum OX=147425 GN=r... | [more] |
Match Name | E-value | Identity | Description | |
A0A218KG28 | 6.7e-15 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus var. hardwickii OX=3... | [more] |
A0A6H0ETN6 | 6.7e-15 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Trichosanthes kirilowii OX=3677 GN=r... | [more] |
A0A1X9Q1B9 | 6.7e-15 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3... | [more] |
A0A249RZI0 | 6.7e-15 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. cantalupensis OX=3... | [more] |
A0A1S4ETZ9 | 6.7e-15 | 57.30 | DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=rpoB PE=3 SV... | [more] |
Match Name | E-value | Identity | Description | |
ATCG00190.1 | 2.4e-17 | 62.16 | RNA polymerase subunit beta | [more] |