ClCG02G013810 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G013810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	F-box protein CPR30-like
Location	CG_Chr02: 27846259 .. 27852000 (+)
RNA-Seq Expression	ClCG02G013810
Synteny	ClCG02G013810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAATAGGTACTTTGATGTAGTGGATGTCTAATTTTGCAACCTCATATAGTTAAGGAGATCACATCCTTTAATTTTGGGCACAATATTTAGTTAGAGGTTGGGTCAAAATTTAGACATATTCATAAGTAAAAAATTCATAAACATGAGAACAATTGAGGGAAACTTTAGAAGAACAAAGATTACATGAAAGACTAAAATCTAAATGCCCCTCAAGACTTGAATATACCAAAATTTCTTTAAAATTTTTAGACTTTAAACACATGCATACGAGACTTCAAATAAGGATTCGATCTTTGAGGAGAGGAGATCAATAAGCCAAGAGTGTATCTAAGAAGTCAAAGGTTGATAAAAAAAGAAATCAACAAACTAAAGACCAACTTTAGAAGATGAACACGCTTAAGAACAAGTCCTTGCGTCAAGTATACGTCTATAAGATAGAATCAAAACGACCTAAAATTATCACATTTATATAAGTTGAACTTTCACTTCCACGAATCAAATTTCTTTTGAAACCACATATAAACAAAAACTAAATTCAAAATTTAACATTTTTCCCCTAAAAATAGATAGTTTCAGATATACCTTTTTCCTATTTAAAAAAACAGTCGACCATTAGTTCAAAACACACACAAAGTAAACAAAAAAGAAGGAAGAAAATCAACGTAATTTGAAACAAGACTTGTCTTATTGTATTTGAACTAGATCTTCAAGTTATTTTTATTTTTATTTTTTTGAAATTTTTGCAATCCAACTGAGCAATTAGTGATTGTTTTTAGTTGTTAGGGGTGATTTTGGACCAAAATGTATAATCAACACAAAATAAAGACATACAAATATGCAAATAGGTTGAGAAAATAACAAAGTTTGGACCAAAGATAGCACCCCAGGCCTAACAGAGGGCTAGTTCAAGTCAAATTAAAGCCTAAATTAATGTTCTCTGTATCGGCCTAAGGCCGAGGTCGAGCCTAACAAAATAGCTAATGAGGCATGTCCCACGAATGCCCCAAGCCAAAGCATCACCCTAGGACCAAAGTAGGCATAAGGGAAGATGCTTGACCTTGACCAACCCTAGCCAAACGAGAAATAGGGTACACCCTTCAGCCCGTTAAGTTGTATGACTATCTTAAAGTGACTCTGAAATCTTATAGAAGCAACTTAGGTCAACCTTCTCTATAAATACATCATTATAGCTTCATATGAGGTAACTTGAATCCTATTCTCAAATTCCCTAGCTTCCACACTCTTTCACTCTCTAACTTAAGCATTAGTGTGTCTGCGATAAGCATCACACCATCGTGCATGTTTTCTTTTTTTGTTGGCCACATTCTTCTTCCCCTTAAAAAAAATTAATTGCTGGTGTCACGTGTGAAGGGATTGAATCCCACAGTGGAAGTGAATGATCACTTTGCTTTCAATTTTGTTTTAGAAATCATAACACAAAAAAGAAGAAAATACAGTAAATAAGATTTACAACATTCATGGGTTAAGCAAAATTACAGGAAAAGAAGAAAGAACTCACCTTTGAAGACCGTCTTCAAGAATTCCAGCAACTTCTTCTTCCTCAACGAATCGATTTTCCACGAACAATATTGCGATGCCACCGTAGGGTTGGAATTATTATTTAAATCTTATTCAAATACAATAAATCTATTTTTATTATAAAATTTAATTTGAATCTTATCCAAAATTAACTTTAAATAATAATGTATTTTTATACATTATATTAATTATATCTTATAAATTAATGAATATCCTCTTTAATAAATTTGAACAGTTAAAATTCTTTTAAAACTAATGGTCCTTGTGTACCTATTATGAGTTAGTAGAGGGACCTAACAGACCTACTGTTACATCCCGCCCCAAGTTACCTTGCCAAACCTAGGACATGGCGTGATGACAATAGATTCCATATAAACTATGAAATTCATTGTCAAACTTTAAAAACGTTTTTAAGCTAAGTGACTAGCAAAACCCTTCGTTGTAAACACCATTAAAAATAAAATTTACCAAATCAAATTCTATAATCATTTGAAACAAGTTCATAGAAACTCATTAAGAGAAACTTGCAATTTTTTTTTTTTTTTACAAACCATTTGAAATTAAGGCTAGCGATTCTAGCTAATTCGATGCTAAAACAATAATAGCAAAATACATATGTAATTATGCGAAATCTAAAAAAAATTGGTGGACAAATCTCAACTCTCGTAGGCCATTGGAACCTCAATGCTACCTCGTGAAAAAAAATAAAGGAAAAGAATGAGCTAAAAAGCCCAGTGAGTGGAGAGAGTTCGTAAGAAAATAAGTTTAAAAGAAACTTCGTTATAGTAGCTCTAGAAAACATAGGCATGGACTGATAACAAAATCATCACTAAATCTATACCTAAATCGCTAGTCATATTATGCATCGAGTAGTCTCAAGATACATAGCAGAGCAATCTTTAGTCATACTATACACCAAATAATCTTTAGGTACATAGCAGAGAGAAACTCTAATAATACTATGCACTGAGTGATCTCCAAGTACATAGCAGGGCAAATCTATAGTCTTACTATGCACTGAGTGATCTCCAGGTACATAGCAAGCAAATCTCTAGTCATATGTGCACGTAGAGCAGCCCTCAAAGGGTAAAACACCTCGACACAAGACCCAAAACCTATGTGTGTGCCAAAGTGGGTCTCAAAGATCTCATACATATCATGTCCACACTACGAAAACACATTCACGTAGGTGTATCTAGGGAATTACCATAGGTACAAAATTTAGTGGTTGAAAACCACTTTCAACTTAAAGTTCTTCATTCTTAGTCACTTTAAAAACCATACTTCCACACAATTCTCAAACATTCTAAAGTCATACTCTTCTTTCTTAAACCACATTTCTCAAAGCCACAAATACTTAAACATTTGCGAAATTGGCTAGAACCTAGATATTTATAGAAATTCACTTTTCATAGGCTCCAATAATAGAAACAAGTCATCGTACAAAAAATTCCACATAAACATATATCTCTCTTAAAATTCAATCTTTAGGCATAATTTGTTTCGATAGTAAACAATTAGGAAATGAGCACAAGTTCTTTGAAATCTCAAGTACCAAAATCAATGGTAAGAACACAAATCATAATTTGTTTCAAAAACTCAAAAGAAAACATAAATTGTTAAAATGGTAAAGGTGTTTGCAAAATAACCACTCATAGTACTGTTGGTAAAGAAACTCGGGTCATAAGCTGTTTTGATCTTCGATTTGCCTGAAATGGTAATTTAGCCAAGGGTATAAGAGCTTTTGAATCCCAGTATGTAGCATATCTTTCACCCATTATTCTTAATGGTGTTTACAACGAAGGTTTTGCTAGCCACTTAGCTTTAAATACGTTTTTAGAGTTTGACAATGGATTTCATAGTTTATTTGGAATCTATTGTCGTCATTCCACGTCCTAGGTTTAGCAAGGTAACTTAGACTCGGGTGTAACACCTACGGATTAGAAGCTCTAATGATCCGATATTGACTAATTAAACTCTTTAATTACGTTAATTAACATTCATTAATTGTGGTCACTCCATTATAGACCCACAATTATAGACCCACAATTGCACTCTTTGCACAGTAGACTATTTTGCGTCTATGGATTTAACCATTATAAGTAAGTTGATTATTTACGAATTGTTCGTAATTATAGCTGGGGCAAATTACTGTTTTACCTTTGTAATTACCTTTTACTCCTACCATTAATCTCTCTAATGAACAATCTGTTTATGGTCCTACCATAACCAAGTTCCTCTCGAGCCAATGAGAGGACGAGTACCCTTTGTTCTAGACTCGAAACTAACACTTAAAGGAACTATTCATCTACTTATCTTAAAGACAAGAATGGGTAAATTTTCATCTTGTGTAGTTATGTTGCCAACCCCACATTTGGACAAGTCCCCAAAATGGGAGGCTTATTGAGTCAGTGACTCAGACCATTTCCACTCATACAAATCAAATGACAACCCCATAGAAATTACGTCATAACTCACTCAGTATTAAGATCAAGTTACATATGGTCATCTTATGAAATTTTAATCTCTTTAGTCAATCGTGTTACAAAGAGAGATTAAGTATTTTGCAGTCCAGTCTTATACAATTTCATTGTATAGGATACCCCCACTCGCAGGTCTCCACACGTATGATTTGGATCACATCGTTTGTAACACTTACAAAGTGGGCCATATTCTAATAAATCTTATCCATATACTATAGACCATGTAGGTTATTATTTGAACATGATTTACCTATATGTCTAATACATACTATTCAAGTCTCATCAGATAACTTTAAATTTTCCTATATAAAATAACTAATTATTGCATATTTAAATTAATCAATTATTATATAAAATAACTAATTACTGTAAGGTTTCAAAACATCAATCCCAACAACGTGAAAGTCACGTGCTTTTTGTTTTTTTTCTAAATTTTTGCATCAACAATAGTAGGTCAAATTGATTCTTCAAAGCCAGCCTTTTTTTTGCCAATTGAATAATAATATTTAATTGTGACACTGGTCAAAGATCCACTTTCATGTTCCCTTTTAATTTTGGTCAAACAAACTCCAAGAAAACACAAAATTAAAAAATCCAACTCCAATATGTAATTGATGAATTAGATGGCTCTTGAAACCTCACTTTTATTGGGTGGTCAGAAGAACAACTTTCCAAAAAAATAAATGAATAAAACAATCAACCACTTATTTCAAATTCTATATTTGCTATCTTTAGACTAGTCAAACACCTTTTTAAAAAGAGAAAAAAGAAGATAAAATTATAAGATAAAATTTTCAACTTTTTGAATATAGTTCTATTTTGGTCTTTAAAGTTTTAAAAATGCTTGTTTTAGTCTCTCGACTTTTAAAAAAAATGCTTACTTTGGCTTTGCTCTTAAAATTTTGTTTACTTTTTCACAAAATAACCAAATTACTTGTATTTTTGGATATTTTTTGGATGACTTAGTTACCAAATAAGTCAACACATTAAAAAATCTACGGTTTCAATCTTGAATAAGTAGGTAAAGTGATTTTGTATGAGATAACTTGAAAATCATTTTTTCGTTCAAGAATTTGGTTGTTCACTATTTTGGCGCATTGATAATTGACATTTTACTTCATCTTCATCCTACTCAACACATCTAGAACCTAAAAGTACTTCATCTCCTTTTTCCCACACGATATTTCCTCTGTAATCCCTTCACTAGAAATGTCCGTACACTCCACCCCTCCACTCTTCCCATCAATGCACAACACTTCTTCGATCTCTTTGACGATGGTGTTCATTCCTACCCTAACACCATTGGATTCGGGGACGATCCGATATCTAGGGATTTCAAGGTGGTTAGGGATGTGAATTATGTGGATCCCCCTTCTTTTTTTCGCCCTCTGAGGGCTGAAGTGTACCATTTAAGGAAAGATCGATGGGATGAAATCAAATCCCCTTTCTATGGTTGTGCTCATGAGGGTTCCTTTGAAATGTATTATCAAGGATTCTATTATTGGTGGGCTGATTCTATGCTAGATAAACTCTGTCCTAAAGAAGGAAGACCTAATATTTTATGGTGGTTCAACATGAGCGAGGAGGTTTTTGACCACATTTCGGTACCTTCCCAGAATAACAATGGGAGGTACAAAGGCATGGGGGTTTTGAATGGTTCTATTGTGCTGTTTTATCATACAGACCCTGGGGATGAAAAAAGCTTCGACGTTTAG

mRNA sequence

ATGACAAATAGAAATGTCCGTACACTCCACCCCTCCACTCTTCCCATCAATGCACAACACTTCTTCGATCTCTTTGACGATGGTGTTCATTCCTACCCTAACACCATTGGATTCGGGGACGATCCGATATCTAGGGATTTCAAGGTGGTTAGGGATGTGAATTATGTGGATCCCCCTTCTTTTTTTCGCCCTCTGAGGGCTGAAGTGTACCATTTAAGGAAAGATCGATGGGATGAAATCAAATCCCCTTTCTATGGTTGTGCTCATGAGGGTTCCTTTGAAATGTATTATCAAGGATTCTATTATTGGTGGGCTGATTCTATGCTAGATAAACTCTGTCCTAAAGAAGGAAGACCTAATATTTTATGGTGGTTCAACATGAGCGAGGAGGTTTTTGACCACATTTCGGTACCTTCCCAGAATAACAATGGGAGGTACAAAGGCATGGGGGTTTTGAATGGTTCTATTGTGCTGTTTTATCATACAGACCCTGGGGATGAAAAAAGCTTCGACGTTTAG

Coding sequence (CDS)

ATGACAAATAGAAATGTCCGTACACTCCACCCCTCCACTCTTCCCATCAATGCACAACACTTCTTCGATCTCTTTGACGATGGTGTTCATTCCTACCCTAACACCATTGGATTCGGGGACGATCCGATATCTAGGGATTTCAAGGTGGTTAGGGATGTGAATTATGTGGATCCCCCTTCTTTTTTTCGCCCTCTGAGGGCTGAAGTGTACCATTTAAGGAAAGATCGATGGGATGAAATCAAATCCCCTTTCTATGGTTGTGCTCATGAGGGTTCCTTTGAAATGTATTATCAAGGATTCTATTATTGGTGGGCTGATTCTATGCTAGATAAACTCTGTCCTAAAGAAGGAAGACCTAATATTTTATGGTGGTTCAACATGAGCGAGGAGGTTTTTGACCACATTTCGGTACCTTCCCAGAATAACAATGGGAGGTACAAAGGCATGGGGGTTTTGAATGGTTCTATTGTGCTGTTTTATCATACAGACCCTGGGGATGAAAAAAGCTTCGACGTTTAG

Protein sequence

MTNRNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGCAHEGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPSQNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV

Homology

[Close]

BLAST of ClCG02G013810 vs. NCBI nr
Match: XP_022983805.1 (F-box protein CPR1-like [Cucurbita maxima])

HSP 1 Score: 149.4 bits (376), Expect = 2.8e-32
Identity = 75/151 (49.67%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG D  S+DFKVVR VN+V+ P +F P RAE+Y L KDRW EI++P   
Sbjct: 150 DGYDSSTNAVGFGYDSKSKDFKVVRVVNFVEGPGYFHPPRAEIYDLSKDRWREIETPI-- 209

Query: 87  CAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QN 146
           C H     SFEMY++G YYWWAD+        + +  I+  F+MSEEVF  I VP   + 
Sbjct: 210 CGHVFWAPSFEMYHEGTYYWWADT--------DDKEEIIQSFDMSEEVFRRIPVPESFEG 269

Query: 147 NNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
              RY+ MG+LNGSIVLF++   GDE+ FD+
Sbjct: 270 ERERYRSMGILNGSIVLFHYPSRGDEREFDI 290

[Close]

BLAST of ClCG02G013810 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-32
Identity = 76/151 (50.33%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG D  SRDFKVVR V++V+ P +F P R E+Y L KDRW EI++P   
Sbjct: 150 DGYDSSTNAVGFGYDSKSRDFKVVRVVDFVEGPGYFHPPRVEIYDLSKDRWREIETPV-- 209

Query: 87  CAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QN 146
           C H      FEMY++G YYWWA++        EG   I+  F+MSEEVF  I VP   Q 
Sbjct: 210 CGHVFWAPCFEMYHEGTYYWWAET--------EGGTEIIQTFDMSEEVFGRILVPESFQG 269

Query: 147 NNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
              RY+ +GVLNGSIVLF++   GDE+SFD+
Sbjct: 270 TGDRYRSLGVLNGSIVLFHYPSRGDERSFDI 290

[Close]

BLAST of ClCG02G013810 vs. NCBI nr
Match: XP_022159408.1 (F-box/kelch-repeat protein At3g23880-like [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 8.0e-32
Identity = 78/151 (51.66%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG DP SRDFKVVR VN+V+ P FF P R EVY L KDRW EIK+P   
Sbjct: 152 DGYDSSTNAVGFGYDPRSRDFKVVRVVNFVEGPGFFHPPRVEVYDLGKDRWREIKTPV-- 211

Query: 87  CAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QN 146
           C H     SF+MY++G YYWWAD+        EG   I+  F+MSEEVF  I VP   + 
Sbjct: 212 CGHVFWAPSFDMYHEGMYYWWADA--------EGGSEIIQSFDMSEEVFRPIPVPESFEE 271

Query: 147 NNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
              +Y+ MGV  GSIVLF++    DEK+FD+
Sbjct: 272 LREKYRSMGVWKGSIVLFHYLPGADEKTFDI 292

[Close]

BLAST of ClCG02G013810 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-31
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 4   RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFR 63
           R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F 
Sbjct: 130 REFRKLPPSILLLTEP---PTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 189

Query: 64  PLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPN 123
           P R E+Y L KDRW EI++P   C H     SFEMY++G YYWWAD+        EG   
Sbjct: 190 PPRVEIYDLSKDRWREIETPI--CGHVFWAPSFEMYHEGTYYWWADT-------NEG-VE 249

Query: 124 ILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
           I+  F+MSEEVF  IS+P   +    +Y+ +GVLNGSIVLF +   GDE+ FD+
Sbjct: 250 IIQSFDMSEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRGDEREFDI 290

[Close]

BLAST of ClCG02G013810 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 4.0e-31
Identity = 83/174 (47.70%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 4   RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFR 63
           R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F 
Sbjct: 130 REFRKLPPSILLLTKP---PTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 189

Query: 64  PLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPN 123
             R E+Y L KDRW EI++P   C H     SFEMY++G YYWWAD+        EG   
Sbjct: 190 LPRVEIYDLSKDRWREIETPI--CGHVFWAPSFEMYHEGTYYWWADT-------DEG-VE 249

Query: 124 ILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
           I+  F+M+EEVF  ISVP   +    RY+ MGVLNGSIVLF++   GDE+ FD+
Sbjct: 250 IIQSFDMTEEVFRRISVPESFEGKRERYRSMGVLNGSIVLFHYPSRGDEREFDI 290

[Close]

BLAST of ClCG02G013810 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 75/151 (49.67%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG D  S+DFKVVR VN+V+ P +F P RAE+Y L KDRW EI++P   
Sbjct: 150 DGYDSSTNAVGFGYDSKSKDFKVVRVVNFVEGPGYFHPPRAEIYDLSKDRWREIETPI-- 209

Query: 87  CAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QN 146
           C H     SFEMY++G YYWWAD+        + +  I+  F+MSEEVF  I VP   + 
Sbjct: 210 CGHVFWAPSFEMYHEGTYYWWADT--------DDKEEIIQSFDMSEEVFRRIPVPESFEG 269

Query: 147 NNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
              RY+ MG+LNGSIVLF++   GDE+ FD+
Sbjct: 270 ERERYRSMGILNGSIVLFHYPSRGDEREFDI 290

[Close]

BLAST of ClCG02G013810 vs. ExPASy TrEMBL
Match: A0A6J1DYQ4 (F-box/kelch-repeat protein At3g23880-like OS=Momordica charantia OX=3673 GN=LOC111025827 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.9e-32
Identity = 78/151 (51.66%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG DP SRDFKVVR VN+V+ P FF P R EVY L KDRW EIK+P   
Sbjct: 152 DGYDSSTNAVGFGYDPRSRDFKVVRVVNFVEGPGFFHPPRVEVYDLGKDRWREIKTPV-- 211

Query: 87  CAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QN 146
           C H     SF+MY++G YYWWAD+        EG   I+  F+MSEEVF  I VP   + 
Sbjct: 212 CGHVFWAPSFDMYHEGMYYWWADA--------EGGSEIIQSFDMSEEVFRPIPVPESFEE 271

Query: 147 NNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
              +Y+ MGV  GSIVLF++    DEK+FD+
Sbjct: 272 LREKYRSMGVWKGSIVLFHYLPGADEKTFDI 292

[Close]

BLAST of ClCG02G013810 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 4   RNVRTLHPSTLPINAQHFFDLFDDGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFR 63
           R  R L PS L +          DG  S  N +GFG D  SRDFKVVR VN+V+ P +F 
Sbjct: 130 REFRKLPPSILLLTEP---PTEPDGYDSSTNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 189

Query: 64  PLRAEVYHLRKDRWDEIKSPFYGCAH---EGSFEMYYQGFYYWWADSMLDKLCPKEGRPN 123
           P R E+Y L KDRW EI++P   C H     SFEMY++G YYWWAD+        EG   
Sbjct: 190 PPRVEIYDLSKDRWREIETPI--CGHVFWAPSFEMYHEGTYYWWADT-------NEG-VE 249

Query: 124 ILWWFNMSEEVFDHISVPS--QNNNGRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
           I+  F+MSEEVF  IS+P   +    +Y+ +GVLNGSIVLF +   GDE+ FD+
Sbjct: 250 IIQSFDMSEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRGDEREFDI 290

[Close]

BLAST of ClCG02G013810 vs. ExPASy TrEMBL
Match: A0A5D3DPY4 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007940 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-27
Identity = 67/149 (44.97%), Postives = 90/149 (60.40%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           DG  S  N +GFG D  SRDFKVVR V++V+ P +F P + EVY L  +RW EI++P  G
Sbjct: 150 DGYDSSTNAVGFGYDSKSRDFKVVRVVDFVEGPGYFYPPKVEVYDLSTERWREIQTPVSG 209

Query: 87  CAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNN 146
                  FE++++G YYWWAD         +G   I+  F+MSEEVF  I VP   Q   
Sbjct: 210 HVFWAPCFEVFHEGTYYWWADD--------DGNTEIILTFDMSEEVFGQIPVPESFQGTR 269

Query: 147 GRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
             Y+ +GVL+G IVLF++   GDE+ FD+
Sbjct: 270 DWYRSLGVLDGCIVLFHYPSRGDERRFDM 290

[Close]

BLAST of ClCG02G013810 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-27
Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 27  DGVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYG 86
           D   S  N +GFG D  SRDFKVVR V++V+ P +F P + EVY L K+RW EI++P  G
Sbjct: 150 DDYDSSTNAVGFGYDSKSRDFKVVRVVDFVEGPGYFYPPKVEVYDLSKERWREIQTPVSG 209

Query: 87  CAH-EGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPS--QNNN 146
                  FE++++G YYWWAD+        +G   I+  F+MSEEVF  I VP   Q   
Sbjct: 210 HVFWAPCFEVFHEGTYYWWADA--------DGNTEIILTFDMSEEVFGQIPVPESFQGTG 269

Query: 147 GRYKGMGVLNGSIVLFYHTDPGDEKSFDV 173
             Y+ +GVL+G IVLF++   GDE+ FD+
Sbjct: 270 DWYRSLGVLDGRIVLFHYPSRGDERRFDM 290

[Close]

BLAST of ClCG02G013810 vs. TAIR 10
Match: AT3G16210.1 (F-box family protein )

HSP 1 Score: 42.4 bits (98), Expect = 4.4e-04
Identity = 28/131 (21.37%), Postives = 51/131 (38.93%), Query Frame = 0


Query: 28  GVHSYPNTIGFGDDPISRDFKVVRDVNYVDPPSFFRPLRAEVYHLRKDRWDEIKSPFYGC 87
           G++   N +GFG DP+  D+KVV  ++ +D  +      A V+  R   W E     Y  
Sbjct: 125 GIYQDSNILGFGYDPVHDDYKVVTFIDRLDVST------AHVFEFRTGSWGESLRISYPD 184

Query: 88  AHEGSFEMYYQGFYYWWADSMLDKLCPKEGRPNILWWFNMSEEVFDHISVPSQNNNGRYK 147
            H       +   Y +W       +  +      +  FN+S   +  + +P  N      
Sbjct: 185 WHYRDRRGTFLDQYLYW-------IAYRSSADRFILCFNLSTHEYRKLPLPVYNQGVTSS 242

Query: 148 GMGVLNGSIVL 159
            +GV +  + +
Sbjct: 245 WLGVTSQKLCI 242

The following BLAST results are available for this feature:

BLAST of ClCG02G013810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983805.1	2.8e-32	49.67	F-box protein CPR1-like [Cucurbita maxima]	[more]
XP_038906036.1	6.1e-32	50.33	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_022159408.1	8.0e-32	51.66	F-box/kelch-repeat protein At3g23880-like [Momordica charantia]	[more]
XP_022935692.1	2.3e-31	47.13	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_023526117.1	4.0e-31	47.70	F-box protein CPR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG02G013810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G013810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6Y5	1.3e-32	49.67	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]
A0A6J1DYQ4	3.9e-32	51.66	F-box/kelch-repeat protein At3g23880-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1F6B1	1.1e-31	47.13	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A5D3DPY4	8.4e-27	44.97	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7UHP3	8.4e-27	44.97	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of ClCG02G013810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16210.1	4.4e-04	21.37	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 32..162
None	No IPR available	PANTHER	PTHR47993:SF4	F-BOX PROTEIN CPR30-LIKE	coord: 32..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G013810.2	ClCG02G013810.2	mRNA