Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAATTAGCTCGGAGGTCTTTTGGTGTTATCCTTCAAATCAGGCTTAGGAAATCCAAATCACCACTGCTAAGGCTCAATTCTGAATCTGACTCCTCATTATCCTCCAATTTGTTGAATTCTTGAGAACCTTGGGTAAATTCATAACACTTTGAGACGAAATATTAGGTTTCAGAATGGGCCAATGTCATAGAGTGAATAATCTTTGTTTTTGCATATTACATTGAGAGGAACTATTATTCAATGAAGAATGTGTAGAAACCATGACTGGTTGAGAATAATTTACACTTATGCTTCATTTTCTATTTTTTATTTTTTTGTAAGCCACCTAATGCTTCTTTTTTTCGTAAGCCACCTAATGCTTCTTACATGAAGAAAATTGAGAATCCAACCAATTAGGATTCTGCATTAAGAAACTCACGAGGTGAGAACACCTTTCTTGAATGACACTATGATTAAACAGTTTCTCGGAGATTGCTAAAGGAGCATTTTATGTACCAGATGCTTCTGGGAGGGGATGGATGAGAAGAAAGAAAAAGGAGCACATCCAGTTAGATAGGAGATTCTTAAGAGGCCTATCAATTCAGGCGGTTAGAAGCTGGGAACTTAAAGGCTCACAACAAGGAGTTGTTAGCTAAATGGTCTTGTCGTTTTGCCCTTGAATCCAATTCTCTTTGGCATACGATCATTGTTAGCAAATTCGATCATCATCCTTATGAGATGTCGTCTAGGAGGGTTCTTAGCTCTATCTGA
mRNA sequence
ATTAAATTAGCTCGGAGTTTCTCGGAGATTGCTAAAGGAGCATTTTATGTACCAGATGCTTCTGGGAGGGGATGGATGAGAAGAAAGAAAAAGGAGCACATCCAGCGGTTAGAAGCTGGGAACTTAAAGGCTCACAACAAGGAGTTGTTAGCTAAATGGTCTTGTCGTTTTGCCCTTGAATCCAATTCTCTTTGGCATACGATCATTGTTAGCAAATTCGATCATCATCCTTATGAGATGTCGTCTAGGAGGGTTCTTAGCTCTATCTGA
Coding sequence (CDS)
ATTAAATTAGCTCGGAGTTTCTCGGAGATTGCTAAAGGAGCATTTTATGTACCAGATGCTTCTGGGAGGGGATGGATGAGAAGAAAGAAAAAGGAGCACATCCAGCGGTTAGAAGCTGGGAACTTAAAGGCTCACAACAAGGAGTTGTTAGCTAAATGGTCTTGTCGTTTTGCCCTTGAATCCAATTCTCTTTGGCATACGATCATTGTTAGCAAATTCGATCATCATCCTTATGAGATGTCGTCTAGGAGGGTTCTTAGCTCTATCTGA
Protein sequence
IKLARSFSEIAKGAFYVPDASGRGWMRRKKKEHIQRLEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRVLSSI
Homology
BLAST of ClCG01G012870 vs. NCBI nr
Match:
KAA0060701.1 (Electron transfer flavoprotein-ubiquinone oxidoreductase [Cucumis melo var. makuwa])
HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
LE NL+ NK LLA W CRF LE SLWH IIVSK HP+E +RV
Sbjct: 8 LEPSNLRIRNKALLANWLCRFTLEPESLWHRIIVSKHGIHPFEWMEKRV 56
BLAST of ClCG01G012870 vs. NCBI nr
Match:
TYK08233.1 (Electron transfer flavoprotein-ubiquinone oxidoreductase [Cucumis melo var. makuwa])
HSP 1 Score: 62.0 bits (149), Expect = 3.0e-06
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
LE NL+ NK LLA W CRF LE SLWH IIVSK HP+E +RV
Sbjct: 8 LEPSNLRIRNKALLANWLCRFTLEPESLWHRIIVSKPGIHPFEWMEKRV 56
BLAST of ClCG01G012870 vs. NCBI nr
Match:
KAA0057410.1 (hypothetical protein E6C27_scaffold280G002860 [Cucumis melo var. makuwa] >TYK30109.1 hypothetical protein E5676_scaffold216G00910 [Cucumis melo var. makuwa])
HSP 1 Score: 57.0 bits (136), Expect = 9.6e-05
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
L+ NL+ HN+ LLA W F+LESNSLWH IIV K + +P+E +++ V
Sbjct: 213 LKIDNLRIHNRALLANWLWHFSLESNSLWHRIIVCKHEIYPFEWTTKGV 261
BLAST of ClCG01G012870 vs. ExPASy TrEMBL
Match:
A0A5A7V4N3 (Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold496G00030 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 6.5e-07
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
LE NL+ NK LLA W CRF LE SLWH IIVSK HP+E +RV
Sbjct: 8 LEPSNLRIRNKALLANWLCRFTLEPESLWHRIIVSKHGIHPFEWMEKRV 56
BLAST of ClCG01G012870 vs. ExPASy TrEMBL
Match:
A0A5D3C8M3 (Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427G00040 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 1.4e-06
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
LE NL+ NK LLA W CRF LE SLWH IIVSK HP+E +RV
Sbjct: 8 LEPSNLRIRNKALLANWLCRFTLEPESLWHRIIVSKPGIHPFEWMEKRV 56
BLAST of ClCG01G012870 vs. ExPASy TrEMBL
Match:
A0A5D3E2V6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00910 PE=4 SV=1)
HSP 1 Score: 57.0 bits (136), Expect = 4.7e-05
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSRRV 86
L+ NL+ HN+ LLA W F+LESNSLWH IIV K + +P+E +++ V
Sbjct: 213 LKIDNLRIHNRALLANWLWHFSLESNSLWHRIIVCKHEIYPFEWTTKGV 261
BLAST of ClCG01G012870 vs. ExPASy TrEMBL
Match:
A0A2P5D2K4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_264340 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 5.2e-04
Identity = 26/47 (55.32%), Postives = 28/47 (59.57%), Query Frame = 0
Query: 37 LEAGNLKAHNKELLAKWSCRFALESNSLWHTIIVSKFDHHPYEMSSR 84
LE GNL NK LL KW RFALE N LWH +I SK+ P SR
Sbjct: 32 LEIGNLVRRNKALLTKWLWRFALEKNELWHKVIRSKYGISPNNWDSR 78
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0060701.1 | 1.3e-06 | 59.18 | Electron transfer flavoprotein-ubiquinone oxidoreductase [Cucumis melo var. maku... | [more] |
| TYK08233.1 | 3.0e-06 | 59.18 | Electron transfer flavoprotein-ubiquinone oxidoreductase [Cucumis melo var. maku... | [more] |
| KAA0057410.1 | 9.6e-05 | 51.02 | hypothetical protein E6C27_scaffold280G002860 [Cucumis melo var. makuwa] >TYK301... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V4N3 | 6.5e-07 | 59.18 | Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Cucumis melo var. ma... | [more] |
| A0A5D3C8M3 | 1.4e-06 | 59.18 | Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Cucumis melo var. ma... | [more] |
| A0A5D3E2V6 | 4.7e-05 | 51.02 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A2P5D2K4 | 5.2e-04 | 55.32 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_264340 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
