ClCG01G011020 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G011020
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr01: 17522516 .. 17523232 (-)
RNA-Seq Expression	ClCG01G011020
Synteny	ClCG01G011020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGCTGTCGTCATGCCTCTTTTCAGGTTAAGAGGAAAGCTCGGGAGGGGGTGTGACATATGTACTCTAGAAAAATAGCAATTAATTGAGTGGGCTTGGGTGAAAGGTGGAATAGCCCATCTGGTTTCAAAGAGCTTAAGGATTGATCGGACATTAACCGCCTTAACTATGGTTGGTGAAGGGTTAACCAAGTCAGTCTTTTCTTTAATTTCAAATTACTACGCATTTCTGTACGTCTGGTAGTTGCTTTTTGACAGGCTTTATGTTCACATCGTTGGGGTTTCAAAAGTTCCATCTGCCTCATTTTCTTTCCTTGATCACGTTCTTCATCTTCAACCCTCAGATGGTTAATACCCGATAGGGAACTGAAACTTTCAAGTAAAAAATGATTCAATACAACGAAAAAGCCAAAAGAAACCTATATGTGGAAGTGGAAGTGCCCCTTCCCTCGACGAACAAGTATGGTGTCCGTGTCCATGTTATGCTCGTGGCAAAAAACCTAAAATCGGAGTGCCTCCTTCGTTTGCAAAACGTAGCTGGTCAGTTTTAGGTCCTACGGCCGATGACAAAGGAAACTCAAAAGTAAGTTTCGCTGACTTTACGTTGACTGATTTGGTAGGACCAGGGATAGAAATATTTCGAAAGAAAGGTGAATCCTCTTCTAGTGAGTCTTATGATCACTTACATGAGTTTATTGTTGTTCCACGTTGTTAG

mRNA sequence

ATGTCTGCTGTCGTCATGCCTCTTTTCAGGTTAAGAGGAAAGCTCGGGAGGGGGTGTGACATATGTGGAATAGCCCATCTGGTTTCAAAGAGCTTAAGGATTGATCGGACATTAACCGCCTTAACTATGGTTGGTGAAGGGTTAACCAAGTCATTGCTTTTTGACAGGCTTTATGTTCACATCGTTGGGGTTTCAAAAGTTCCATCTGCCTCATTTTCTTTCCTTGATCACGTTCTTCATCTTCAACCCTCAGATGTAAAAAATGATTCAATACAACGAAAAAGCCAAAAGAAACCTATATGTGGAAGTGGAAGTGCCCCTTCCCTCGACGAACAAGTATGGTGTCCGTGTCCATGTTATGCTCGTGGCAAAAAACCTAAAATCGGAGTGCCTCCTTCGTTTGCAAAACGTAGCTGGTCAGTTTTAGGTCCTACGGCCGATGACAAAGGAAACTCAAAAGTAAGTTTCGCTGACTTTACGTTGACTGATTTGGTAGGACCAGGGATAGAAATATTTCGAAAGAAAGGTGAATCCTCTTCTAGTGAGTCTTATGATCACTTACATGAGTTTATTGTTGTTCCACGTTGTTAG

Coding sequence (CDS)

ATGTCTGCTGTCGTCATGCCTCTTTTCAGGTTAAGAGGAAAGCTCGGGAGGGGGTGTGACATATGTGGAATAGCCCATCTGGTTTCAAAGAGCTTAAGGATTGATCGGACATTAACCGCCTTAACTATGGTTGGTGAAGGGTTAACCAAGTCATTGCTTTTTGACAGGCTTTATGTTCACATCGTTGGGGTTTCAAAAGTTCCATCTGCCTCATTTTCTTTCCTTGATCACGTTCTTCATCTTCAACCCTCAGATGTAAAAAATGATTCAATACAACGAAAAAGCCAAAAGAAACCTATATGTGGAAGTGGAAGTGCCCCTTCCCTCGACGAACAAGTATGGTGTCCGTGTCCATGTTATGCTCGTGGCAAAAAACCTAAAATCGGAGTGCCTCCTTCGTTTGCAAAACGTAGCTGGTCAGTTTTAGGTCCTACGGCCGATGACAAAGGAAACTCAAAAGTAAGTTTCGCTGACTTTACGTTGACTGATTTGGTAGGACCAGGGATAGAAATATTTCGAAAGAAAGGTGAATCCTCTTCTAGTGAGTCTTATGATCACTTACATGAGTTTATTGTTGTTCCACGTTGTTAG

Protein sequence

MSAVVMPLFRLRGKLGRGCDICGIAHLVSKSLRIDRTLTALTMVGEGLTKSLLFDRLYVHIVGVSKVPSASFSFLDHVLHLQPSDVKNDSIQRKSQKKPICGSGSAPSLDEQVWCPCPCYARGKKPKIGVPPSFAKRSWSVLGPTADDKGNSKVSFADFTLTDLVGPGIEIFRKKGESSSSESYDHLHEFIVVPRC

Homology

The following BLAST results are available for this feature:

BLAST of ClCG01G011020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011020 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG01G011020 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G011020.1	ClCG01G011020.1	mRNA