Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATCACTGCAATATCTCCAACCCCAGGTCTATCTACCTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCCTTTCTCTCGTCCTAACCGCACAATTTCCCTTCCTGGCGGTGCCAATTTCATCGCCAGAGCCAACGTTTTTGTCCATTTTGAAACGACAACGCTTCTGCACAAGCCTCACCGATTAGCTTTCACTTTCTCCACTCGTGCTGCTGATTCTACGCAGCCCTCTGCAGTTTCAGCTTCGCCGGGTAAAGCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTACGTTTCTGTTTCTTTATGATTTATGAATTATTGCGAATATTGGGAATGGACACTCCTAGGTGGCACTTAGATTGGAATTTGTCGATTATGTTTTATGTGCTCTTAGAGGTTTTTAAGAAACGAGAGGAGATGTTTGAGATAAATGTAGTGTTTAAATTGTGCGGGAGTAGAATTTTGTGTTCACGTGTCTGAAAGTTTTATGTGTTGTAGAGATTTGGATTTAAGATATGCTTTGATAATGTTCTAAAATATTTGTTGGAATGCGTTGAGTTGATAATATAAAACTACTCTCTCTTTCTAACCAAGGACGTAGCTAACATTCTGTAGTTTATATTTTTTTTGTTTGTCGATTTTGTTTCTGTTATAAAAATATTGTTATGATTAAAAGTTTAAGCTGTTAAACTAAAATTAATCATTTACAATGTTTCCAATGCTCTATTTGAAAAATATAATATGCTTCAAATTTATATGGAATAATAAACTACGTAAGTACCAGATATTTTGTTATATCAATAAAATACTTACGGGAACTGGCAGGATGGTACCCCTGATTACAAATGTGTAGTATCCAAGAGAATTGTGACTGTATATTGATTTTGATTGTTGCCTTTGAATGAATGCAATGTACAATTTCTTTTCTCTCTATTGATGTACACACCTTTTGTCTTTGTGAATTGTGATTTAGTTTCTTTTGGTCTATTTGTTCTGTTGTTGTGGTGTTTTACCATTTTCTTTTACAGGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTAAGTTGTTTCCTCCTGAGGCTCAAAATTTGTAAATTTATAACTTGTACATTTGATCTGTTTTGGTTCTATAGGTATGGATTCGGTGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCTATTATTGGCATGGCTCTAAAGGTACAAGTTACAACTCTCTATTTATTCACCTTTTGCAGTTTAAGAATGGTTTAGTGCAATAAATGTATGATTTACTTTAGTAGCCACATCCATCTTATGATCGTTTTAGATTTTCTATTCCCTGTATATTATAGTTATAACTTGGTAGCTTATCCAAATTCAAAAGTACCTAAAAGTTTATATCTGGTGTTTTAAAGAAAGGTAGTGTGACTTTAGTGTTCAACGGCATTCTATGTTCCATTGGTTATTTCCTTTATCAAATGGCCTTGCAGTGTTGCTTATTTTTACCTTATTCCTTAACTTCATGAACTTGAGCTGAAAACAAAAAGAATTGATAGAGAGAATTAGGTAACTCATTCTCGCCTTTGGGTGTTTTGCAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACTCCAATTCTTAAACAGGTTTTTTGTTGGAACTTGATCTTTTGATGACCGTGCTTGTAAAATATGTTGTAAACATATTCTCTTGTGATTGCTTGTTTTGATAGACCAGCTATTCTTGTACTTTTGTTTATTTTGCTTGGGAAGAATCTTATATATTTATTCTTATAGTGGGAGTAGAAGAACAAAATTGAAATTGGAATGTTTAGGAGAAAGAAATTTGGGCCCAAAAGTGTGGGTAGCAATACTTTGGTAGGAAGCCGGAAGAGAGAAGTGAAGAGGAGTTGAAGGTGTGGGAAGAATGGGAAAGAGCAGTCTGATTTTTGGCTGCTTGTGGAGAATTTATCAGAATTCTTGTTTTTTCTATTTCTTTTTGCCTGTCATTGTGAATTTCCATTTGAGACTTGTCATGTTTTTCTATTTACTGGTCTATGATATTTTGTTTATTTAGGTTTCTTCATCTAGTCAATTCAATTTTTAGGTTTGAACTTTCATGTTGTTGATACTGTACTACAGCTTGGGAAAGCATGAATCTGTCGTGTTGTGTGATTATCATCTTTTCCACGTTATAAATGAAAAATTATCAATTAATTCAGAAAGAACAAAAAGTTTGCCTTTTATTTCACTTTGACTTTGCTTCAGACAGCATGCAACTTGCGAGTTTAACTTAAATTGTTTCTAATACATTGTTATTCTGTATACACACAAGTTTCATTGTATAAATTGTTTCATATTTCTGATTACTTCTTAACGTTTTCACTAGGTAAGAGACGATGTTATTAGGTTTCGTTATGGGGATGAACAACACTTGGATGAGGCGTTGAAACGGATTTTCCAGTATGGTCTGGTAAGTAAATTGAGGTTCTTGAATCATCTTTATCTGTGATCTTTGATTGCATTTTTACATGCGAGTAATTTCACTCTTTTTCTTCTTCTGTCTGTTTCTTATTTTGTGGATTCTTGTTTCCTTTTTAGAATTATATCAATTGAAAAAACTCCTGCCTTATCAATTCAGAAACTGAAAATTGGCTTCACTTTTGCTTAGCCGTTGCACTGTTTTGAAACTAGAATTTCTATACACCACTAGAGGCGGAATAGTACGTGGATCCCAGCTGTCTGAACTCCAATTCATGCTTGTCCCACCACAATTTTCAATTTTGGATCCAGTAAATATTCTAATACATAGGTCAGGAACGCACATTTTGATGTAATTTTGAAACTGATGTTACATATTGTTGAGGTAGCCTCTTATCATCCATTTGCGCTCTTCTTGAAGGATGAAGTGTGGCATCCAGCGCTCAAAAGAACTCTTACAATCTCTACTGAATACGAAAGAGTATTTAAGGAGACTTAGAAGTTGATACCATTATATAGGCTATGATATTTGACTCGATTGATAACGCCTAATATTGTAGTAATAGTGAACTAATTGAACAAAATAACTAATCGGCGGATTGATCAACAACTTAGAAGACTGACTATGGTAAATGTGACAAACAGAAAAAGATAAAGTACCATGCGAAACTAACTTCTAGACTGCTCTACATATTGCCTATATTCCAGTTGCCTATATTCCAGTTGCCTATATGCGAAAACTAACTTTAGACTGCACTACATAACAGACACCCATGACTTCCAACATTCATGGGACGCTTGAATAGACTCTTAAGAGGGTTAATAGTTTTTATCTTGGCCGTTTACATAAATAAAAATATCAAATAAAATTTATGATGTCGAACAAAATACTATATTTCTTGTTTTGAAAATATAAATTTTTGGATGTATTTGCTCATGAATGTTATGTTCTTACAAGACATTGAGCCATTTAGAACTGTGTTTCTCTGATTTTAAATTTTCCTAATGAGCCTTGGCATAAGATGGTGCATCATGGCTATGCATTTGATTACTTCAACTTCTCTTAGTTTTCGTGTGCTTCATATTGTATTTCAAATGTTAACGTCTAATTCAAAAGTAAACTTATGTCAACTTTTGAGCGTCGGAATTATTTAACTTCATCAAAAGTACACAAATAGATGTCGGTTCTAACTCTCAACTTTTTGATGATAACGTGTTGTCATGTCTATCTCCTCTGGATGTACCCTACTTTCTAGCCAATTAGCAGTTCGATACACGATAGATTAATATACTGTGAGATATGAACATTATCATAATTTCTTCACTGGTTATTCATAAGTTTGTTTTTAGATTGTATTTTAGATTTTCAATGTACATTTCACTGTAACGTTTTGTATGGCTAAGGCTTCTCAGCTTACAAGTTCTCTTCTTTCCATCATCTATTCCCCTCATTTCTCTTTGTCTATTTCTTAACTTGGTCATCCTGCCTTTGATAACTTGAAGGTCAGGCAGATACATCAATACAGATAGAAGTTTTATTCACAATCTTAATGTGAAATTGTATCAATTGTGTATTTGAATCCTCATTTTTATGCTTTACATCAAGTTTTGTAAATTGATCAATGTTGCAATCTACTTTTGTATGCACAGGCTGGTGGAATTCCTCGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTATGTTTGCATGACTTTGTTTTTGTTTTAGATATCATCTGTTGGCATATTTGTCACTGCAGTACTTATCACGCTTCTGATTGTACCAACTGGAAGTACTACTAAATACAATAGCATGATAACGACACTGATAGTTCTAATATTAAGCCATTGGATACAATTCTAGGTCACAGAAGATGGAAAATATTGCCTGGTCTTGGCGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGGAAAGACAGGTAATTGACATATGCTCCTTCTTATTAAATGGTTGAAGAAAGAGTGCTGTCAGATTTCTTTACCTTCTTAATTCTACAAAAGATCAATTTAATTGCTCAAAACCCAAATTTTGCTAATGCTGATGTAGTCATGATAGTAAATGGTTATCGTCATTCTAAAGGAAAAATAGTTTTCGGAAGATATTATATTAAAAGATGAACCTATAACGAACTTGCAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATAACTGCAGACGTTGGTGAGCTTAATGCCTTGCCTAATTTATCTTTTTCCTTTTCTTTTTTTTTTTTTTTTTGGTAATTTACAATTGTTTCTGAAATTTTCTTGAAACTTTTGCAGGGAAAGGGGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGA
mRNA sequence
ATGTCAATCACTGCAATATCTCCAACCCCAGGTCTATCTACCTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCCTTTCTCTCGTCCTAACCGCACAATTTCCCTTCCTGGCGGTGCCAATTTCATCGCCAGAGCCAACGTTTTTGTCCATTTTGAAACGACAACGCTTCTGCACAAGCCTCACCGATTAGCTTTCACTTTCTCCACTCGTGCTGCTGATTCTACGCAGCCCTCTGCAGTTTCAGCTTCGCCGGGTAAAGCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACTCCAATTCTTAAACAGGTAAGAGACGATGTTATTAGGTTTCGTTATGGGGATGAACAACACTTGGATGAGGCGTTGAAACGGATTTTCCAGTATGGTCTGGCTGGTGGAATTCCTCGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAATATTGCCTGGTCTTGGCGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGGAAAGACAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATAACTGCAGACGTTGGGAAAGGGGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGA
Coding sequence (CDS)
ATGTCAATCACTGCAATATCTCCAACCCCAGGTCTATCTACCTGCTCCCATGATCAATTCACTCTCTCCAATCGCCTTTCCCTTGTTTCTCTCCCTTTCTCTCGTCCTAACCGCACAATTTCCCTTCCTGGCGGTGCCAATTTCATCGCCAGAGCCAACGTTTTTGTCCATTTTGAAACGACAACGCTTCTGCACAAGCCTCACCGATTAGCTTTCACTTTCTCCACTCGTGCTGCTGATTCTACGCAGCCCTCTGCAGTTTCAGCTTCGCCGGGTAAAGCAGTAGTTACTGACGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCTATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACTCCAATTCTTAAACAGGTAAGAGACGATGTTATTAGGTTTCGTTATGGGGATGAACAACACTTGGATGAGGCGTTGAAACGGATTTTCCAGTATGGTCTGGCTGGTGGAATTCCTCGACGGAGTGCACCTATTTTGCAAAGTATACGTGAAGAAGTCACAGAAGATGGAAAATATTGCCTGGTCTTGGCGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGGAAAGACAGGCCAAATTTGCTTCTTTCTTTGGACCAGGGATAACTGCAGACGTTGGGAAAGGGGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCGTGA
Protein sequence
MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFETTTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP*
Homology
BLAST of Chy9G158520 vs. ExPASy Swiss-Prot
Match:
Q55403 (Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0575 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 77/187 (41.18%), Postives = 105/187 (56.15%), Query Frame = 0
Query: 103 LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPV 162
L K+S +GL VG L GF AY L + + YG PL + G+ALK AELKP+
Sbjct: 2 LPKISLAAVGLTVGGILTITGFVAY--ALDYATLNLAGFFYGIPLVLGGLALKAAELKPI 61
Query: 163 PCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRR 222
P + ++K LR ATP Q+R DV R+RYG E HLDE+L+R+ GL+ R
Sbjct: 62 P-FSQPTSEKIIALRNQLATPTQNQIRKDVTRYRYGQEAHLDESLERL---GLSPTDEER 121
Query: 223 SAPILQSIREEVTEDGKYCLVLAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDL 282
P+L S+ E+ E GKY L L F + ++L ++E+Q K A FFGP + V + E +
Sbjct: 122 --PVLTSLLEQDWE-GKYVLTLTFTSPFISLETWQEKQEKIAKFFGPDLEVTVAEPEEKV 179
Query: 283 YEVRLIS 287
V LIS
Sbjct: 182 VTVNLIS 179
BLAST of Chy9G158520 vs. ExPASy TrEMBL
Match:
A0A0A0KVX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1)
HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 288/294 (97.96%), Postives = 291/294 (98.98%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TTLLHKPHRLAF+FSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 TTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 295
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRL SNTIPGASP
Sbjct: 241 LVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294
BLAST of Chy9G158520 vs. ExPASy TrEMBL
Match:
A0A5A7TDN5 (Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001820 PE=4 SV=1)
HSP 1 Score: 557.0 bits (1434), Expect = 4.8e-155
Identity = 281/294 (95.58%), Postives = 286/294 (97.28%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR ISLPGG NFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TLLHKPHRLAFTFSTRAADSTQPSAVSASP KAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 295
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294
BLAST of Chy9G158520 vs. ExPASy TrEMBL
Match:
A0A1S3CAR1 (thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 SV=1)
HSP 1 Score: 555.1 bits (1429), Expect = 1.8e-154
Identity = 280/294 (95.24%), Postives = 285/294 (96.94%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR I LPGG NFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TLLHKPHRLAFTFSTRAADSTQPSAVSASP KAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 295
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294
BLAST of Chy9G158520 vs. ExPASy TrEMBL
Match:
A0A6J1GWV5 (uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC111458174 PE=4 SV=1)
HSP 1 Score: 494.2 bits (1271), Expect = 3.8e-136
Identity = 252/292 (86.30%), Postives = 265/292 (90.75%), Query Frame = 0
Query: 3 ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFETTT 62
++ ISP L CSHD+FTL NRLSLVSL FSRP SLPGG N RAN FVHFE
Sbjct: 1 MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
Query: 63 LLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122
L KP RLAFTFS RAAD+TQPS+VSASP KAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 61 PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182
GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLA 242
KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
Query: 243 FEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 295
FEAKALTLSDFE+RQAKFASFFGPGI A+VGKG+NDLYEVRLISNTIPGASP
Sbjct: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
BLAST of Chy9G158520 vs. ExPASy TrEMBL
Match:
A0A6J1JQQ4 (uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.5e-135
Identity = 251/292 (85.96%), Postives = 264/292 (90.41%), Query Frame = 0
Query: 3 ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFETTT 62
++ ISP L CSHD+FTL NRLSLVSL FSRP SLPGG N RAN FVH E
Sbjct: 1 MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRA 60
Query: 63 LLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122
L KP RLAFTFS RAAD+TQPS+VSASP KAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 61 PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182
GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLA 242
KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLM 240
Query: 243 FEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 295
FEAKALTLSDFE+RQAKFASFFGPGI A+VGKG+NDLYEVRLISNTIPGASP
Sbjct: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
BLAST of Chy9G158520 vs. NCBI nr
Match:
XP_004141498.1 (uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical protein Csa_009392 [Cucumis sativus])
HSP 1 Score: 568 bits (1465), Expect = 4.48e-204
Identity = 288/294 (97.96%), Postives = 291/294 (98.98%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TTLLHKPHRLAF+FSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 TTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 294
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRL SNTIPGASP
Sbjct: 241 LVFEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294
BLAST of Chy9G158520 vs. NCBI nr
Match:
KAA0039379.1 (thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid membrane protein [Cucumis melo var. makuwa])
HSP 1 Score: 553 bits (1425), Expect = 5.60e-198
Identity = 281/294 (95.58%), Postives = 286/294 (97.28%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR ISLPGG NFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TLLHKPHRLAFTFSTRAADSTQPSAVSASP KAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 294
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294
BLAST of Chy9G158520 vs. NCBI nr
Match:
XP_008459460.1 (PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo])
HSP 1 Score: 551 bits (1420), Expect = 3.24e-197
Identity = 280/294 (95.24%), Postives = 285/294 (96.94%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSITAISPTPGLST SH QFTLSNRLSL+SLPFSRPNR I LPGG NFIAR NVFVHFET
Sbjct: 1 MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFET 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TLLHKPHRLAFTFSTRAADSTQPSAVSASP KAVVTDDEFSLAKVSFGVIGLGVGVSLL
Sbjct: 61 KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 294
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGENDLYEVRLISN+IPGASP
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294
BLAST of Chy9G158520 vs. NCBI nr
Match:
XP_038890554.1 (thylakoid membrane protein slr0575-like [Benincasa hispida])
HSP 1 Score: 496 bits (1278), Expect = 1.57e-175
Identity = 252/290 (86.90%), Postives = 262/290 (90.34%), Query Frame = 0
Query: 1 MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFET 60
MSI+ ISPTPGL +CSHDQFTL NRLS++SL FSRP RTIS PGG NFI R N VHFE
Sbjct: 1 MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEP 60
Query: 61 TTLLHKPHRLAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120
TLL KP RLAFTFS RAADSTQPS+VSASP KAVV+DDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61 RTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLL 120
Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180
SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATP 180
Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240
ILKQVRDDVIRFRYGDEQHLDEALKRIFQYG+AGGIPRRSAPILQSIREEV EDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLV 240
Query: 241 LAFEAKALTLSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIP 290
L FEAKALTLSDFE+RQAKFASFFGPGITA+VGKGE DLYE L P
Sbjct: 241 LVFEAKALTLSDFEQRQAKFASFFGPGITAEVGKGETDLYETGLFLTLFP 290
BLAST of Chy9G158520 vs. NCBI nr
Match:
XP_023524489.1 (uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 491 bits (1263), Expect = 2.43e-173
Identity = 247/285 (86.67%), Postives = 262/285 (91.93%), Query Frame = 0
Query: 10 PGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARANVFVHFETTTLLHKPHR 69
P + CSHD+FTL NRLSLVSL FSRP SLPGG N+ RAN FVHFE L KP R
Sbjct: 6 PPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNWNGRANFFVHFEPRAPLQKPQR 65
Query: 70 LAFTFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFN 129
LAFTFS RAAD+TQPS+VSASP KAVVTDDEFSLAKVSFGVIGLGVG+SLLSYGFGAYFN
Sbjct: 66 LAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFN 125
Query: 130 ILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDV 189
+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDV
Sbjct: 126 VLPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDV 185
Query: 190 IRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLAFEAKALT 249
+R+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL FEAKALT
Sbjct: 186 LRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALT 245
Query: 250 LSDFEERQAKFASFFGPGITADVGKGENDLYEVRLISNTIPGASP 294
LSDFE+RQAKFASFFGPGI A+VGKG+NDLYEVRLISNTIPGASP
Sbjct: 246 LSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
BLAST of Chy9G158520 vs. TAIR 10
Match:
AT5G38660.1 (acclimation of photosynthesis to environment )
HSP 1 Score: 341.7 bits (875), Expect = 6.0e-94
Identity = 171/212 (80.66%), Postives = 190/212 (89.62%), Query Frame = 0
Query: 77 RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEW 136
RAADST S AS + ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EW
Sbjct: 65 RAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEW 124
Query: 137 SAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGD 196
SAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGD
Sbjct: 125 SAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGD 184
Query: 197 EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLAFEAKALTLSDFEER 256
EQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV DG+YC+VL FEAKALTLSDFE+R
Sbjct: 185 EQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAKALTLSDFEKR 244
Query: 257 QAKFASFFGPGITADVGKGEND-LYEVRLISN 288
QAKF SFFGP ITA+VGKGE++ LYEVRLISN
Sbjct: 245 QAKFTSFFGPNITAEVGKGESENLYEVRLISN 276
BLAST of Chy9G158520 vs. TAIR 10
Match:
AT5G38660.2 (acclimation of photosynthesis to environment )
HSP 1 Score: 318.5 bits (815), Expect = 5.5e-87
Identity = 158/196 (80.61%), Postives = 175/196 (89.29%), Query Frame = 0
Query: 77 RAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEW 136
RAADST S AS + ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EW
Sbjct: 65 RAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFGAYFTILPGTEW 124
Query: 137 SAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGD 196
SAIMLTYGFPL+IIGMALKYAELKPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGD
Sbjct: 125 SAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQVRNDVTRYRYGD 184
Query: 197 EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLAFEAKALTLSDFEER 256
EQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV DG+YC+VL FEAKALTLSDFE+R
Sbjct: 185 EQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAKALTLSDFEKR 244
Query: 257 QAKFASFFGPGITADV 273
QAKF SFFGP ITA+V
Sbjct: 245 QAKFTSFFGPNITAEV 260
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q55403 | 1.3e-24 | 41.18 | Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazus... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KVX1 | 1.1e-159 | 97.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1 | [more] |
A0A5A7TDN5 | 4.8e-155 | 95.58 | Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
A0A1S3CAR1 | 1.8e-154 | 95.24 | thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 ... | [more] |
A0A6J1GWV5 | 3.8e-136 | 86.30 | uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC1114581... | [more] |
A0A6J1JQQ4 | 2.5e-135 | 85.96 | uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968... | [more] |
Match Name | E-value | Identity | Description | |
XP_004141498.1 | 4.48e-204 | 97.96 | uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical ... | [more] |
KAA0039379.1 | 5.60e-198 | 95.58 | thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid memb... | [more] |
XP_008459460.1 | 3.24e-197 | 95.24 | PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo] | [more] |
XP_038890554.1 | 1.57e-175 | 86.90 | thylakoid membrane protein slr0575-like [Benincasa hispida] | [more] |
XP_023524489.1 | 2.43e-173 | 86.67 | uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT5G38660.1 | 6.0e-94 | 80.66 | acclimation of photosynthesis to environment | [more] |
AT5G38660.2 | 5.5e-87 | 80.61 | acclimation of photosynthesis to environment | [more] |