Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT
mRNA sequence
ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT
Coding sequence (CDS)
ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT
Protein sequence
MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRREVPLKRMRVTSQERLSAMRISLVDFSSFFYILN
Homology
BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match:
A0A5A7T3H7 (DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00570 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
M+N+GWA++V+TRVG WQG LDFL+ PLDDCKIVLGLD +D AH IN +KKTL+F IR
Sbjct: 1 MKNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIR 60
Query: 61 REVPLKRMRVTSQERLSAMRI 82
E PLKRM T + RLSAMR+
Sbjct: 61 EEAPLKRMGATGEVRLSAMRV 81
BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match:
A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
M N+ WA +V+ R+G QG LDFL+ PL+DCKI+LGLD +D+A+ IN KKTL F IR
Sbjct: 51 MMNIRWAWDVKIRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIR 110
Query: 61 REVPLKRMRVT 72
REVPLKRM T
Sbjct: 111 REVPLKRMGAT 121
BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match:
A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
MRN+GW +V+TRV WQG LDFL+T LDD KIV+GLD +DKAH IN LKKTL+FP IR
Sbjct: 39 MRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIR 98
Query: 61 RE 63
RE
Sbjct: 99 RE 100
BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match:
A0A5D3E2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00360 PE=4 SV=1)
HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
+RN+G A +++TRVG WQG LDFL+ PL+D KIV+GLD +DKAH IN LKKTL+FP IR
Sbjct: 264 LRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVIGLDFIDKAHATINLLKKTLDFPRIR 323
Query: 61 RE 63
RE
Sbjct: 324 RE 325
BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match:
A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAH 45
M+N+GWA++V+TRVG WQG L+FL+ LDDCKI+LGLD +D AH
Sbjct: 412 MKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAH 455
BLAST of Chy8G152690 vs. NCBI nr
Match:
KAA0035959.1 (DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA damage-inducible protein 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 118 bits (296), Expect = 1.45e-30
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
M+N+GWA++V+TRVG WQG LDFL+ PLDDCKIVLGLD +D AH IN +KKTL+F IR
Sbjct: 1 MKNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIR 60
Query: 61 REVPLKRMRVTSQERLSAMRI 81
E PLKRM T + RLSAMR+
Sbjct: 61 EEAPLKRMGATGEVRLSAMRV 81
BLAST of Chy8G152690 vs. NCBI nr
Match:
TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 2.69e-21
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
M N+ WA +V+ R+G QG LDFL+ PL+DCKI+LGLD +D+A+ IN KKTL F IR
Sbjct: 51 MMNIRWAWDVKIRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIR 110
Query: 61 REVPLKRMRVT 71
REVPLKRM T
Sbjct: 111 REVPLKRMGAT 121
BLAST of Chy8G152690 vs. NCBI nr
Match:
KAE8646814.1 (hypothetical protein Csa_005402 [Cucumis sativus])
HSP 1 Score: 93.2 bits (230), Expect = 4.96e-20
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 0
Query: 2 RNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRR 61
RN GWA NV+ ++G+W+G +DFL+ PLDDCK+VLGLD + +AH ++ ++TL FP+ +R
Sbjct: 207 RNYGWAWNVKVKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKR 266
Query: 62 EVPLKRMRVTSQERLSAMR 80
EVPLK + +T + + AM+
Sbjct: 267 EVPLKCIGMTGKVMIGAMQ 285
BLAST of Chy8G152690 vs. NCBI nr
Match:
KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])
HSP 1 Score: 93.2 bits (230), Expect = 7.30e-20
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 0
Query: 2 RNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRR 61
RN GWA NV+ ++G+W+G +DFL+ PLDDCK+VLGLD + +AH ++ ++TL FP+ +R
Sbjct: 314 RNYGWAWNVKVKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKR 373
Query: 62 EVPLKRMRVTSQERLSAMR 80
EVPLK + +T + + AM+
Sbjct: 374 EVPLKCIGMTGKVMIGAMQ 392
BLAST of Chy8G152690 vs. NCBI nr
Match:
KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 89.7 bits (221), Expect = 1.76e-19
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0
Query: 1 MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
MRN+GW +V+TRV WQG LDFL+T LDD KIV+GLD +DKAH IN LKKTL+FP IR
Sbjct: 39 MRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIR 98
Query: 61 RE 62
RE
Sbjct: 99 RE 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T3H7 | 1.1e-23 | 66.67 | DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A5D3E2A4 | 1.8e-15 | 60.56 | Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7UQ97 | 4.0e-15 | 69.35 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E2B7 | 4.0e-15 | 66.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7T2W8 | 1.1e-09 | 65.91 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0035959.1 | 1.45e-30 | 66.67 | DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA d... | [more] |
| TYK30022.1 | 2.69e-21 | 60.56 | Asp_protease domain-containing protein [Cucumis melo var. makuwa] | [more] |
| KAE8646814.1 | 4.96e-20 | 49.37 | hypothetical protein Csa_005402 [Cucumis sativus] | [more] |
| KAE8637433.1 | 7.30e-20 | 49.37 | hypothetical protein CSA_004611, partial [Cucumis sativus] | [more] |
| KAA0057354.1 | 1.76e-19 | 69.35 | uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
