Chy8G152690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy8G152690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DNA damage-inducible protein 1-like
Location	chrH08: 14531617 .. 14531898 (+)
RNA-Seq Expression	Chy8G152690
Synteny	Chy8G152690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT

mRNA sequence

ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT

Coding sequence (CDS)

ATGCGTAACGTTGGATGGGCAAGAAACGTCGAGACGAGGGTAGGGAAATGGCAAGGTACGCTCGATTTCCTTGTTACGCCTCTAGACGATTGCAAGATTGTCCTAGGGTTGGACGTCTTAGACAAAGCCCATGTTGTAATCAACACACTCAAGAAGACCTTGGAGTTCCCCGACATACGGAGGGAGGTGCCCCTAAAACGCATGAGGGTGACAAGCCAGGAGAGGCTTAGTGCCATGCGGATTTCATTAGTCGACTTCTCATCATTTTTTTATATATTGAAT

Protein sequence

MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRREVPLKRMRVTSQERLSAMRISLVDFSSFFYILN

Homology

[Close]

BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match: A0A5A7T3H7 (DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00570 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
          M+N+GWA++V+TRVG WQG LDFL+ PLDDCKIVLGLD +D AH  IN +KKTL+F  IR
Sbjct: 1  MKNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIR 60

Query: 61 REVPLKRMRVTSQERLSAMRI 82
           E PLKRM  T + RLSAMR+
Sbjct: 61 EEAPLKRMGATGEVRLSAMRV 81

[Close]

BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match: A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
           M N+ WA +V+ R+G  QG LDFL+ PL+DCKI+LGLD +D+A+  IN  KKTL F  IR
Sbjct: 51  MMNIRWAWDVKIRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIR 110

Query: 61  REVPLKRMRVT 72
           REVPLKRM  T
Sbjct: 111 REVPLKRMGAT 121

[Close]

BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match: A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
           MRN+GW  +V+TRV  WQG LDFL+T LDD KIV+GLD +DKAH  IN LKKTL+FP IR
Sbjct: 39  MRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIR 98

Query: 61  RE 63
           RE
Sbjct: 99  RE 100

[Close]

BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match: A0A5D3E2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00360 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
           +RN+G A +++TRVG WQG LDFL+ PL+D KIV+GLD +DKAH  IN LKKTL+FP IR
Sbjct: 264 LRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVIGLDFIDKAHATINLLKKTLDFPRIR 323

Query: 61  RE 63
           RE
Sbjct: 324 RE 325

[Close]

BLAST of Chy8G152690 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAH 45
           M+N+GWA++V+TRVG WQG L+FL+  LDDCKI+LGLD +D AH
Sbjct: 412 MKNIGWAQDVKTRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAH 455

[Close]

BLAST of Chy8G152690 vs. NCBI nr
Match: KAA0035959.1 (DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA damage-inducible protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (296), Expect = 1.45e-30
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 1  MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
          M+N+GWA++V+TRVG WQG LDFL+ PLDDCKIVLGLD +D AH  IN +KKTL+F  IR
Sbjct: 1  MKNIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIR 60

Query: 61 REVPLKRMRVTSQERLSAMRI 81
           E PLKRM  T + RLSAMR+
Sbjct: 61 EEAPLKRMGATGEVRLSAMRV 81

[Close]

BLAST of Chy8G152690 vs. NCBI nr
Match: TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 2.69e-21
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
           M N+ WA +V+ R+G  QG LDFL+ PL+DCKI+LGLD +D+A+  IN  KKTL F  IR
Sbjct: 51  MMNIRWAWDVKIRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIR 110

Query: 61  REVPLKRMRVT 71
           REVPLKRM  T
Sbjct: 111 REVPLKRMGAT 121

[Close]

BLAST of Chy8G152690 vs. NCBI nr
Match: KAE8646814.1 (hypothetical protein Csa_005402 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 4.96e-20
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 2   RNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRR 61
           RN GWA NV+ ++G+W+G +DFL+ PLDDCK+VLGLD + +AH  ++  ++TL FP+ +R
Sbjct: 207 RNYGWAWNVKVKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKR 266

Query: 62  EVPLKRMRVTSQERLSAMR 80
           EVPLK + +T +  + AM+
Sbjct: 267 EVPLKCIGMTGKVMIGAMQ 285

[Close]

BLAST of Chy8G152690 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 7.30e-20
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 2   RNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIRR 61
           RN GWA NV+ ++G+W+G +DFL+ PLDDCK+VLGLD + +AH  ++  ++TL FP+ +R
Sbjct: 314 RNYGWAWNVKVKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKR 373

Query: 62  EVPLKRMRVTSQERLSAMR 80
           EVPLK + +T +  + AM+
Sbjct: 374 EVPLKCIGMTGKVMIGAMQ 392

[Close]

BLAST of Chy8G152690 vs. NCBI nr
Match: KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.76e-19
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 1   MRNVGWARNVETRVGKWQGTLDFLVTPLDDCKIVLGLDVLDKAHVVINTLKKTLEFPDIR 60
           MRN+GW  +V+TRV  WQG LDFL+T LDD KIV+GLD +DKAH  IN LKKTL+FP IR
Sbjct: 39  MRNLGWDWDVKTRVEGWQGKLDFLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIR 98

Query: 61  RE 62
           RE
Sbjct: 99  RE 100

The following BLAST results are available for this feature:

BLAST of Chy8G152690 vs.


Match Name	E-value	Identity	Description

BLAST of Chy8G152690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3H7	1.1e-23	66.67	DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3E2A4	1.8e-15	60.56	Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7UQ97	4.0e-15	69.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E2B7	4.0e-15	66.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T2W8	1.1e-09	65.91	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Chy8G152690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035959.1	1.45e-30	66.67	DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA d...	[more]
TYK30022.1	2.69e-21	60.56	Asp_protease domain-containing protein [Cucumis melo var. makuwa]	[more]
KAE8646814.1	4.96e-20	49.37	hypothetical protein Csa_005402 [Cucumis sativus]	[more]
KAE8637433.1	7.30e-20	49.37	hypothetical protein CSA_004611, partial [Cucumis sativus]	[more]
KAA0057354.1	1.76e-19	69.35	uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Chy8G152690 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..71 e-value: 5.9E-8 score: 34.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy8G152690.1	Chy8G152690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0008233	peptidase activity