Chy6G120960 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G120960
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Tubulin glycylase
Location	chrH06: 17707817 .. 17712945 (-)
RNA-Seq Expression	Chy6G120960
Synteny	Chy6G120960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGAAGGAGTTGCTTCTATTGCACTTCTGCCTTGTGGCTCGGTCTCTGGCCACTTCATTCAACTTCCGCACTCCATTTGCTACGGCCTCCATGGCACTGGTATGCTTCACATCCATTTCCCCAACTCTCGCTCTGCCTTTGATTCTTTTAAATTTCTGAATGATTCTTAGAAAGACCATTTTAAGTATAACTATGATTATGGTTTTGGTTTTGATATTTATGGAAACACTCTAAATCAAGTTTGGTTATCTTCATGTGGAAGACTTTCTTGCATAAGTTTTGGAAAATCTTTTCTCAATTGATGATAGAAAGTATTTGTATAAGGCATTACAAAAAGTAGCATTGGTGAAAAATTATCCTTCTATTCTTTCTAAATTTCACTCCTCAACTGAGGTGTGTGGATTACCGATGAAAAAATTAGGCCTCAAACACCACCAAGTAAGATTTAACTGAGGCTTTAGGGTCTGGGTTTAAGTCGTTTTGGTGCTCATCTTTAGTATTTGTTATTGGAAGTCTTTCAGTTGATGTATAGGTATGAATTCTGGTTTGTGGGTTTGGTAGTTTATGGAAATACTCTTTAACAAGGTTGAAAATTCGACTGTAGCAAACTGGTTCAGTAAATTGAAGGTCGGAAGAAAGCGTTGGGTTTTGTGGATCTTGGAAAGAAAAGGGTTGCTTGTTTTGCTTTTGTTTTTGTTTTTGGTTTTTTTCCCCTGAATACTAGAGGCCAAATTAATACTTAATATTTTAGAATTCTACATATGTTGAAGGTAAGGTTTGAACTGAAGATCTCTGTAGGTTTGTTACGTACTTGATCTGAACATTCTTTGTATGAATTTTTGTCATAAATAACATGTTTTAAGTTCGTATGGTGGCATGGTATTTTATTTTCGTGACCCTTTTCAGTCTTGAGAGAAACTTGCGCTAGAAATCTTTCTTTGCTACTCACAAATATGGCAAACTTAACAAATGATTCTAGCAAAGAGCTTGAATTTCATATTCCAGCAAAGAGCTTATAATTAGAACGTATAAATGACAATCTTAAGGAGCTAATCAATGGAGGAGATATGAGATCCTACAATATGAAATTGAAGCTCTACAAGTTGAAACCAACTCAAAGGAAGCTGATGTTGAAATTCAATGAAAGACCACTTGAAGTCAAATCAATCACGAGGCGATCATTATGCAACAATGACCAACGATGAAATAGAGCTAGAAGTCTTCTTGAAGGCACTAAATGATTACTTCCAAATTAAGCCTTCAAGCCAAAGTGAAGAGTTAATCAAAATCTGCCTTTTCATCCAAAAGAAACGATTCTACATTCATTCATATTATTTATGGATTATGTACTAATTTAATTTCATGTATTTATAATTATGAGTGTAAGACCTGTACTGAATGGAAGGGGTCAAATAAGAATTTTTGAATTAGGAGTTTTTGATTAGGGGTTCTGAAGAAGGGAACTGACTAAACGATCAGTTTGAGGATCTAAACGATCGGTTAAAGAAGCTAAACGATCGATTAAAGGATCTAAACGATCGTGTAGAAAGATAAACGATCGTATAGTTAGATGATCGTGTAAGAAGTAAATGATTGTTTGAAAGATAAATGATCGTGTAAGAAGTTGAACGACGTTTAAAAGCTAAACGATTGGCCAGACATTGGAAGTTGAAAGACAATTTTGAGTTAACTGCTCAGTGAGTAGATTCTAGGTGTTTAGACATGCGAAGACTCAGAATTTAAGTAAGTAGTAGCTGGCAAGCTTAGAGGAGTTTAAGAGTGACTAATCCAATTTAGGATTAGTATAAATAGAGGAAGTAAAGAAAGCAGCGGTAGGCGTGAAGAAGAGTGAATTAGGCGTTTTGAAGTAGGGAGAAAAGAAGTATTTTGTGAGTGATTTTCTTACGAGGAATTCCAGATTTCTAAAGCTTTCCTTAATCTCCTGTGTGATGTATTATTATGCATGTTTATGTTTATGAAAAGCATGATTTATGAAAAAAGTTTTAGTGTTGAATTTCAAAGTTAAGGTTCATGTTTTATTGATTGTGATGTATGCTTTGATTGAGAGTAAACCATTAATCATATTCCTATCAATAAGCTAGCTATTACGTGCACATAAAGAGCAAAGGCAGCCGTGTAGTTTTCTACATGACTGCATTGTGGAGTGAAGCTGACCAATGCATAAAAGGAGTGTGTTGAGCTTAGTGGCCTGAGCAACGAGAAGTGAACCAAGGCTATTCCCAGATGCTGTTGATGAAAAAGACATCACAGTAGTCTAAACTCGAGATCCTGAGTCTTGGCGTAGGGAATGGTTCATGTACTTGGTAGAAAGGAATATATGAGACTAATGTGTGTTTTCATGATTTATGTTTAATGAACTGTGGCGTTGTCTGTGTTGTGAAATGAAAATGTTTTATGAATTGTATTTCCGAAGAGGTTTTAAAAAATTATCACTCACTAAGTCGTAGACTTACGTTTTAAGTTTTCCCTACCCCTAGATTGTAAGAAACTAAGCGATCGAGTAAGAAGCTTAGCTATCATTTAAGGAATTTAAGGAGCTAAGCGATCAAGTTGAAAGGTAAACAATCGTTTAAGGAGTTGAGCAATCAGAGCTAAGCGATTGGTCAAGGAGCTAAGCGATCGGACTGAAGAGCTAAGCGATTGTTGAAGGTTGAAGACTGTGAAGGCGTTTATGATTTCTTATTTAAATCTTGTACTAAGTTCTTGCTTCATGTACTGTTATAAAAAGTATGTTATTAAGTTATTAAAAGTGTAGTTGTGTTGTTTTCCGCTGCGCTATGGATGTGTTATTTATCGTTTAGTAGTATTAAAGGACCTAAGCAAGCTTTCTGGCATTTCACTTAAGAGGTGTCAGGATTGCTCAAGTCACGTTTCGTTTCGCATGGCAAGTTTAAGGGCGCGTGCGAGGCGGGGCGGGGCGGGGCGGGGTGTGAGAATGAGAGTAATTAAAAGAGAGTTAGATGAATTTAGACAACTAGGTGAAGGGTGTGTCCTTTCATATTGTCTTTTCATTTAGTACATATAGTGTTGTATTTCTCACATTTGGAAGAGGAGAAGAAGATTGAAAATGTAGAAACTTGGTTTTTAAACCTTAAAACCTTAAAAGCTTTTAAGCTTTGTTTCTTGTGTTCTTGTGATAGAAAACATGAATATTTAAAGCATTCAAGTGAGGATTGATCTATCTTGCTTGTGGAGTGCTTTGAAGATTAAAGGTTGATGGGAGATTCAAAACTTTGTCCGATCTTTGGCTATTAGATCATCTAAGTAACCTGTTATCTACCCTTCCTTAGGGGTTGATGTAAATTTGGTTTTGGGTTCTTCGGGTTGAGTTCCTTGGGTCTTGTTTTTCAAAATGGTTCTTAGATCCGATGCCCAGAGGTTTCATATCAGAAAAACCTTGGAAATTTAAATTCATTTGCACAAACAATATCTGAAGTCTAAATGCAAAACAAAAAACAGGACAATGCTCAAATTGTCTTAAATGTCTATAGTAGGAGACACTAGTGATGATTTTCACATTTGACAAGCTTCAATATCATAAGCTCCCAAGAGGTGCAATCTGGACAGACAGTATTCACAATTCTGTACACTTTCTTTTTTTGTTTTTGGTTCCCATGCAATGCCATCTTTCAAACTACATTGCTTTTCCTGCATCATCTTCATTCCATTCTCTTCTTTAGCTATGAAAGTCTCTTGAATCTTCTTTGCCATCTTGGAATAGCTCCTTCAGTTATATTCAATTGATCAATTTTGGATTCACATCAATCCTTCTTTTAGAATGCATGGTTTCTCTTTTTCCCCTGCCAAGTTTATCTTGCTGTTGCTTAATCTGTAAGTTTGTTGATAATTTTGGTGTGCAATCTTTGTCTTCCAGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATGTGATACATTTGCCTCCTTTTGCTTCTTTCTTCTAAGTTGCTAAAATTTTGTTCTCAATCAGCAACCTTTATTAAGTTGTTTGTTGAGATTCCTATCCTTTTACATCCCCATTTCCATTTGTGTTTTACTGCCAGAACAAGCAAGAACGAACTGTCGTTGTTGAATGTAGAGGCCATGATGCTGCACGGTTTCACAGCATTGTTCATGCTCATGGGTAAGTCCCAAGTATTGCAATAGTTAACTTATTTTTCAATCATCCTTTAGTGAGACATTCAATAATTCTTCTTATCTCTAATTAATCTTCTTTCTGCTTCACGTTTCACGTAAAAGAGATGGAAACAAATTATCGGCTGTTCATATTCCTCACCATTTTGAATGTTTGAGCTACTTTTCAAATCAAACAGTTAACTATCACCGTTTGCTAAATTCTACTTTTAGAACCTAATATGACTTGTTATGGCTGCTCTGAATCCATTGGCTTCTTGTTTGAGTTGATTGTAACTTTGATGTGATGAACATCAGTAAGTTCCTCTCATATATGTAGACAGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACACGGAAAGAACGAGATTATGGTTTCCTTCGAGTGTCAGATGTTGAAGTCCGAAAAAGCAGCCGAAGATCACATCAGACAGTTTATGCCCAAATTAGTAGGGCAAGACGCTGTTGGTACGTGTAGCCACAATTTTCAATATACCAACTATAGTACAAAGCTTGATTTTACAATTTCATGAAGTAAAGAGATCCTCTTCTTTCAAGGAGTTTGAGCCTCCTTGCAATCTGATTGAATGTCTTATAATTCACTTCGACAAAAATAAGTTATTTAGTGATAGTTTATAAAAGTGAATAAGAATGAAGCTAGCCTTGTGCATCGCCCCAGGAGGTAAGACATGGTCAAAAGTTCAATTTTTACCTTCACATAACTAAAATAATAATAATAACAGAAGTTGTAGTCTAGAACCTTGCCATCCTCGAATGATGAAAATGTGCTGTCTCATCATCTGTGTTCTACATACTTTGGCAATTTCGTTTATGAGTGAAGCTTTGAATGGACAGTTAACGTGGGGCCAATGAGCATCGGAGGATTGGATTTTGAAGCAGAGGAGCAGCCAGGAGAGTGA

mRNA sequence

ATGGCTATGGAAGGAGTTGCTTCTATTGCACTTCTGCCTTGTGGCTCGGTCTCTGGCCACTTCATTCAACTTCCGCACTCCATTTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAGAACGAACTGTCGTTGTTGAATGTAGAGGCCATGATGCTGCACGGTTTCACAGCATTGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACACGGAAAGAACGAGATTATGGTTTCCTTCGAGTGTCAGATGTTGAAGTCCGAAAAAGCAGCCGAAGATCACATCAGACAGTTTATGCCCAAATTAGTAGGGCAAGACGCTGTTGTTAACGTGGGGCCAATGAGCATCGGAGGATTGGATTTTGAAGCAGAGGAGCAGCCAGGAGAGTGA

Coding sequence (CDS)

ATGGCTATGGAAGGAGTTGCTTCTATTGCACTTCTGCCTTGTGGCTCGGTCTCTGGCCACTTCATTCAACTTCCGCACTCCATTTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACAATTACGAACTACAATAACAAGCAAGAACGAACTGTCGTTGTTGAATGTAGAGGCCATGATGCTGCACGGTTTCACAGCATTGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACACGGAAAGAACGAGATTATGGTTTCCTTCGAGTGTCAGATGTTGAAGTCCGAAAAAGCAGCCGAAGATCACATCAGACAGTTTATGCCCAAATTAGTAGGGCAAGACGCTGTTGTTAACGTGGGGCCAATGAGCATCGGAGGATTGGATTTTGAAGCAGAGGAGCAGCCAGGAGAGTGA

Protein sequence

MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE*

Homology

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BLAST of Chy6G120960 vs. ExPASy TrEMBL
Match: A0A0A0LAZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516480 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA
Sbjct: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 159
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE
Sbjct: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158

[Close]

BLAST of Chy6G120960 vs. ExPASy TrEMBL
Match: A0A5D3DF47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00630 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.2e-85
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 24  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 83

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
            KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA
Sbjct: 84  KKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 143

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 159
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQP E
Sbjct: 144 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPEE 181

[Close]

BLAST of Chy6G120960 vs. ExPASy TrEMBL
Match: A0A1S3BN08 (uncharacterized protein LOC103491830 OS=Cucumis melo OX=3656 GN=LOC103491830 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KHGKNEIMVSFECQMLKSEKAA
Sbjct: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVENKHGKNEIMVSFECQMLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 159
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEE P E
Sbjct: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEPPEE 158

[Close]

BLAST of Chy6G120960 vs. ExPASy TrEMBL
Match: A0A6J1IS39 (uncharacterized protein LOC111480016 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480016 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 11  MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 70

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           N QERTVVVE RGHDAARFHSIVHAHGWEEDVV MVEKKHGKN+IM+SFECQ LKSEKAA
Sbjct: 71  NMQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEKAA 130

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 159
           EDHIRQF+PKLVGQDAVVNVGPMSI GLDFEAEEQPGE
Sbjct: 131 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE 168

[Close]

BLAST of Chy6G120960 vs. ExPASy TrEMBL
Match: A0A6J1J065 (uncharacterized protein LOC111480016 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111480016 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           N QERTVVVE RGHDAARFHSIVHAHGWEEDVV MVEKKHGKN+IM+SFECQ LKSEKAA
Sbjct: 61  NMQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 159
           EDHIRQF+PKLVGQDAVVNVGPMSI GLDFEAEEQPGE
Sbjct: 121 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE 158

[Close]

BLAST of Chy6G120960 vs. NCBI nr
Match: XP_004149842.1 (uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus] >XP_011651516.1 uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus] >XP_031738372.1 uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus] >KGN58109.1 hypothetical protein Csa_017450 [Cucumis sativus])

HSP 1 Score: 326 bits (835), Expect = 1.49e-112
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA
Sbjct: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE
Sbjct: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158

[Close]

BLAST of Chy6G120960 vs. NCBI nr
Match: KAA0060329.1 (uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa] >TYK22078.1 uncharacterized protein E5676_scaffold318G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (821), Expect = 4.52e-110
Identity = 156/158 (98.73%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 24  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 83

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
            KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA
Sbjct: 84  KKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 143

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQP E
Sbjct: 144 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPEE 181

[Close]

BLAST of Chy6G120960 vs. NCBI nr
Match: XP_008450156.1 (PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo] >XP_016900818.1 PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo] >XP_016900819.1 PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo])

HSP 1 Score: 318 bits (816), Expect = 1.18e-109
Identity = 155/158 (98.10%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KHGKNEIMVSFECQMLKSEKAA
Sbjct: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVENKHGKNEIMVSFECQMLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158
           EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEE P E
Sbjct: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEPPEE 158

[Close]

BLAST of Chy6G120960 vs. NCBI nr
Match: XP_038877383.1 (uncharacterized protein LOC120069678 [Benincasa hispida])

HSP 1 Score: 311 bits (797), Expect = 9.62e-107
Identity = 152/159 (95.60%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           NKQERTVV+ECRGHDAARF SIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQ+LKSEKAA
Sbjct: 61  NKQERTVVIECRGHDAARFRSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQILKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEE-QPGE 158
           EDHIRQF+PKLVGQDAVVN+GPMSI GLDFEAEE QPGE
Sbjct: 121 EDHIRQFIPKLVGQDAVVNIGPMSIRGLDFEAEEEQPGE 159

[Close]

BLAST of Chy6G120960 vs. NCBI nr
Match: XP_022980738.1 (uncharacterized protein LOC111480016 isoform X3 [Cucurbita maxima])

HSP 1 Score: 306 bits (784), Expect = 8.92e-105
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYN 60
           MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYN
Sbjct: 1   MAMEGVASIALLPCGSVSGHFIQLPHFVCYGLHGTELECERECSRGEDYRLIKLTITNYN 60

Query: 61  NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAA 120
           N QERTVVVE RGHDAARFHSIVHAHGWEEDVV MVEKKHGKN+IM+SFECQ LKSEKAA
Sbjct: 61  NMQERTVVVERRGHDAARFHSIVHAHGWEEDVVKMVEKKHGKNDIMISFECQTLKSEKAA 120

Query: 121 EDHIRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQPGE 158
           EDHIRQF+PKLVGQDAVVNVGPMSI GLDFEAEEQPGE
Sbjct: 121 EDHIRQFIPKLVGQDAVVNVGPMSIRGLDFEAEEQPGE 158

[Close]

BLAST of Chy6G120960 vs. TAIR 10
Match: AT3G29280.1 (unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-67
Identity = 113/152 (74.34%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 4   EGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKQ 63
           EGVASIALLPCG++SGHFIQ+P SICYGLHGTEL CE ECSRGEDYRLIKLTI +YN K+
Sbjct: 23  EGVASIALLPCGTISGHFIQMPSSICYGLHGTELACETECSRGEDYRLIKLTIIDYNRKK 82

Query: 64  ERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDH 123
           E+TVVVEC+GHDAAR + + HAHGWEEDV+ +VE+KHGK ++ VSFEC+ LK+++AAEDH
Sbjct: 83  EQTVVVECKGHDAARINDVEHAHGWEEDVIGLVEEKHGKKKVSVSFECETLKADEAAEDH 142

Query: 124 IRQFMPKLVGQDAVVNVGPMSIGGLDFEAEEQ 156
           IRQFMPKL G DAV+N+GPM I GLDF A E+
Sbjct: 143 IRQFMPKLAGLDAVINIGPMKISGLDFAAVEE 174

The following BLAST results are available for this feature:

BLAST of Chy6G120960 vs.


Match Name	E-value	Identity	Description

BLAST of Chy6G120960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAZ2	1.5e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516480 PE=4 SV=1	[more]
A0A5D3DF47	6.2e-85	98.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BN08	2.4e-84	98.10	uncharacterized protein LOC103491830 OS=Cucumis melo OX=3656 GN=LOC103491830 PE=...	[more]
A0A6J1IS39	1.2e-80	93.67	uncharacterized protein LOC111480016 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J065	1.2e-80	93.67	uncharacterized protein LOC111480016 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Chy6G120960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149842.1	1.49e-112	100.00	uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus] >XP_011651516....	[more]
KAA0060329.1	4.52e-110	98.73	uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008450156.1	1.18e-109	98.10	PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo] >XP_016900818.1 P...	[more]
XP_038877383.1	9.62e-107	95.60	uncharacterized protein LOC120069678 [Benincasa hispida]	[more]
XP_022980738.1	8.92e-105	93.67	uncharacterized protein LOC111480016 isoform X3 [Cucurbita maxima]	[more]

BLAST of Chy6G120960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29280.1	2.0e-67	74.34	unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37738	OS03G0209700 PROTEIN	coord: 2..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G120960.1	Chy6G120960.1	mRNA