Chy6G120810 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G120810
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Glutaredoxin
Location	chrH06: 17411439 .. 17411822 (-)
RNA-Seq Expression	Chy6G120810
Synteny	Chy6G120810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATACCAAGCACAACAACAATACGGAGCATCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGCCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCGTCCCTCTCCTGAAAAGCGCCGGCGCGCTTTGGCTTTAA

mRNA sequence

ATGCAATACCAAGCACAACAACAATACGGAGCATCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGCCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCGTCCCTCTCCTGAAAAGCGCCGGCGCGCTTTGGCTTTAA

Coding sequence (CDS)

ATGCAATACCAAGCACAACAACAATACGGAGCATCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGCCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTGGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCGTCCCTCTCCTGAAAAGCGCCGGCGCGCTTTGGCTTTAA

Protein sequence

MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLKSAGALWL*

Homology

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BLAST of Chy6G120810 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 8.9e-39
Identity = 82/134 (61.19%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 8   QYGASASSSSSY----------SANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCG 67
           QYGA+A+  + Y          +A     R+ER+A+E+AVV+FS++SCCMCHAVKRLFCG
Sbjct: 2   QYGAAAAEQAWYMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCG 61

Query: 68  MGVKTTVYELDEDPRGKEIEKALMRLMG----SSSAVPAVFIGGKLIGSMDRVMASHING 127
           MGV   V+ELD DPRG+++E+AL RL+G    +++AVP VFIGGKL+G+MDRVMA+HING
Sbjct: 62  MGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHING 121

[Close]

BLAST of Chy6G120810 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-38
Identity = 84/134 (62.69%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 8   QYGASASSSSSYSANDP-------MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 67
           QYGA+A  +    A  P       + R+ER+A+E+AVV+FS++SCCMCHAVKRLFCGMGV
Sbjct: 2   QYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGV 61

Query: 68  KTTVYELDEDPRGKEIEKALMRLMG-------SSSAVPAVFIGGKLIGSMDRVMASHING 127
             TV+ELD DPRG+E+E+AL RL+G       S   VP VFIGGKL+G+MDRVMA+HING
Sbjct: 62  HPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHING 121

[Close]

BLAST of Chy6G120810 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-36
Identity = 71/103 (68.93%), Postives = 89/103 (86.41%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M R+ R+AA+ AVV+FSM+SCCMCH V RLFC +GV  TV ELDEDPRGKE+EKAL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLKSAGALWL 128
           G S AVPAVFIGG+L+GS D+VM+ H++G+LVPLL++AGALW+
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Chy6G120810 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-34
Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSAN------DPMRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + + +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSS-------AVPAVFIGGKLIGSMDRVM 120
           F GMGV   V+ELD  P G EI +AL+RL+G SS       A+P VFIGGK++G+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 121 ASHINGSLVPLLKSAGALWL 128
           ASHINGSLVPLLK AGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Chy6G120810 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 7.3e-33
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYS-----ANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +      A+  + RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVKTTVYELDEDPRGKEIEKALMRLMG-----SSSAVPAVFIGGKLIGSMDRVMASH 120
            GMGV   V+ELD  P G +I++AL+RL+G     S  ++P VFIGGKL+G+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKSAGALWL 128
           INGSLVPLLK AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Chy6G120810 vs. ExPASy TrEMBL
Match: A0A0A0LB28 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G563270 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 SAGALWL 128
           SAGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Chy6G120810 vs. ExPASy TrEMBL
Match: A0A5A7V3D7 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00530 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.0e-62
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 SAGALWL 128
           SAGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Chy6G120810 vs. ExPASy TrEMBL
Match: A0A1S3BP86 (glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.0e-62
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 SAGALWL 128
           SAGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Chy6G120810 vs. ExPASy TrEMBL
Match: A0A6J1F512 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMG--SSSAVPAVFIGGKLIGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMG  SSSAVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKSAGALWL 128
           LK+AGALWL
Sbjct: 121 LKNAGALWL 123

[Close]

BLAST of Chy6G120810 vs. ExPASy TrEMBL
Match: A0A6J1J7B3 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.3e-52
Identity = 113/128 (88.28%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIE+MAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS-AVPAVFIGGKLIGSMDRVMASHINGSLVPLL 120
             TVYELDEDPRGKEIEKALMRLMGSSS AVPAVFIGGKL+GSMDRVMASHINGSLVPLL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLL 120

Query: 121 KSAGALWL 128
           K+AGALWL
Sbjct: 121 KNAGALWL 122

[Close]

BLAST of Chy6G120810 vs. NCBI nr
Match: XP_004148005.1 (glutaredoxin-C1 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 5.42e-82
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 SAGALWL 127
           SAGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Chy6G120810 vs. NCBI nr
Match: XP_008450140.1 (PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-like [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (624), Expect = 2.21e-81
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120

Query: 121 SAGALWL 127
           SAGALWL
Sbjct: 121 SAGALWL 127

[Close]

BLAST of Chy6G120810 vs. NCBI nr
Match: XP_038874416.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 1.10e-74
Identity = 118/127 (92.91%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG+S SSSSSYSAND +RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGSS-SSSSSYSANDSLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLK 120
             TVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKL+GSMDRVM SHINGSLVPLLK
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMVSHINGSLVPLLK 120

Query: 121 SAGALWL 127
           +AGALWL
Sbjct: 121 NAGALWL 126

[Close]

BLAST of Chy6G120810 vs. NCBI nr
Match: XP_022935242.1 (glutaredoxin-C1-like [Cucurbita moschata])

HSP 1 Score: 213 bits (543), Expect = 4.36e-69
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKSAGALWL 127
           LK+AGALWL
Sbjct: 121 LKNAGALWL 123

[Close]

BLAST of Chy6G120810 vs. NCBI nr
Match: XP_023528287.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213 bits (543), Expect = 4.36e-69
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120

Query: 121 LKSAGALWL 127
           LK+AGALWL
Sbjct: 121 LKNAGALWL 123

[Close]

BLAST of Chy6G120810 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-35
Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSAN------DPMRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + + +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSS-------AVPAVFIGGKLIGSMDRVM 120
           F GMGV   V+ELD  P G EI +AL+RL+G SS       A+P VFIGGK++G+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

Query: 121 ASHINGSLVPLLKSAGALWL 128
           ASHINGSLVPLLK AGALWL
Sbjct: 121 ASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Chy6G120810 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 5.2e-34
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYS-----ANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +      A+  + RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVKTTVYELDEDPRGKEIEKALMRLMG-----SSSAVPAVFIGGKLIGSMDRVMASH 120
            GMGV   V+ELD  P G +I++AL+RL+G     S  ++P VFIGGKL+G+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKSAGALWL 128
           INGSLVPLLK AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Chy6G120810 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 5.6e-28
Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M  +++M +E +VV+FS  SCCM H +K LF  +GV  T+YELDE  RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLKSAGALWL 128
           G S  VP VFIGG+L+G  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Chy6G120810 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 9.5e-28
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M  I +M  E  VV++S +SCCM H +K L C  G    VYELDE  RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLKSAGALWL 128
           G S AVP VFIGG+L+G  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 61  GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Chy6G120810 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M ++++M +E ++V+FS  SCCM H +K LF  +GV  T+YELDE  RGKEIE+AL +L 
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLVPLLKSAGALWL 128
           G S  VP VFIGG+L+G  ++VM+ H+N SL+P+LK  GALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of Chy6G120810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JDM4	8.9e-39	61.19	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q6K609	2.6e-38	62.69	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q7G8Y5	1.1e-36	68.93	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
Q8LF89	3.9e-34	56.43	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q96305	7.3e-33	56.93	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]

BLAST of Chy6G120810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB28	2.1e-62	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G56327...	[more]
A0A5A7V3D7	6.0e-62	99.21	Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G...	[more]
A0A1S3BP86	6.0e-62	99.21	glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1	[more]
A0A6J1F512	1.9e-52	88.37	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1	[more]
A0A6J1J7B3	4.3e-52	88.28	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1	[more]

BLAST of Chy6G120810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148005.1	5.42e-82	100.00	glutaredoxin-C1 [Cucumis sativus]	[more]
XP_008450140.1	2.21e-81	99.21	PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-lik...	[more]
XP_038874416.1	1.10e-74	92.91	glutaredoxin-C1-like [Benincasa hispida]	[more]
XP_022935242.1	4.36e-69	88.37	glutaredoxin-C1-like [Cucurbita moschata]	[more]
XP_023528287.1	4.36e-69	88.37	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy6G120810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14070.1	2.8e-35	56.43	Thioredoxin superfamily protein	[more]
AT3G02000.1	5.2e-34	56.93	Thioredoxin superfamily protein	[more]
AT4G15700.1	5.6e-28	57.28	Thioredoxin superfamily protein	[more]
AT5G18600.1	9.5e-28	56.31	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.6e-27	54.37	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 37..100 e-value: 1.1E-14 score: 54.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 20..126 e-value: 4.9E-31 score: 108.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 5..126
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 25..126 score: 22.49379
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 36..118 e-value: 1.48472E-38 score: 123.034
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 28..127 e-value: 1.1E-42 score: 142.0
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..126
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 25..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G120810.1	Chy6G120810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity