Chy6G118180 (gene) Cucumber (hystrix) v1

Overview


Name	Chy6G118180
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Encodes a protein whose expression is responsive to nematode infection, putative
Location	chrH06: 11975329 .. 11976143 (+)
RNA-Seq Expression	Chy6G118180
Synteny	Chy6G118180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAATCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCAGCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAACCTTCCCTCGCGACCATTGTTCGCTTCGTCGCGCTTGTTCCGACCTTCATAATTTGTCTGCCTCTGACCGTCTCCAGTGCCTTTTGCTCTCTAGTCGTTCGGTTTCTGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGACGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGTAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTTGAGGTCACAAAGAGGATTGTTGATTTTTGTGCAAGAAGTAGAGATAATGTCTATGGCGACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGTGGTAAAGCATGCTAGGTGCATTTTTAGCTGTTTTATTTGAATCCTTCAATTTGATGATGAAATTGTTGTAATTTTCGACATTTTACTCATCTGTAATTTTAAAAATTTTGATTCGGTGGTTAAATCTTTGACAATTTTCTTATTTTATTTGTCTAGTATTTTTGAGACACCAACTCATTGCTTTCGATATGTATTGCATATGAACGTAATGTTGGTGTTTGGGGCTAGAGGAAAGAGCTTCGCTGGATGGAGAGAGCCATCCCAAAAAGTTCTTAGGGCCATTGTAG

mRNA sequence

ATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAATCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCAGCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAACCTTCCCTCGCGACCATTGTTCGCTTCGTCGCGCTTGTTCCGACCTTCATAATTTGTCTGCCTCTGACCGTCTCCAGTGCCTTTTGCTCTCTAGTCGTTCGGTTTCTGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGACGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGTAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTTGAGGTCACAAAGAGGATTGTTGATTTTTGTGCAAGAAGTAGAGATAATGTCTATGGCGACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGTGAGGAAAGAGCTTCGCTGGATGGAGAGAGCCATCCCAAAAAGTTCTTAGGGCCATTGTAG

Coding sequence (CDS)

ATGAAAATCAATGGAGAAACCATCAAAATAACACTTCCAACCACAGCATACGAAGTCACAAGCCATTATCCAAATCACCTTCTTTATGAATCCAAATCCCTAAAACTGTTTGGCCTCCGAGCAAAGCCTTTGGACCCTCACTGTCAGCTCGAACCTAAAACCCTTTACTTCCTCCTCCAATTGCCAACCTTCCCTCGCGACCATTGTTCGCTTCGTCGCGCTTGTTCCGACCTTCATAATTTGTCTGCCTCTGACCGTCTCCAGTGCCTTTTGCTCTCTAGTCGTTCGGTTTCTGACCTCCAAACTCTTCGATTCGATCCTCAGAGGTCATCAACCGACGACGGTGCTGCTAAGCCTGTGCAGGTCAAATTTCAATTGCCGAGGGTAGAATTCGAGAGATTGATGAAGGAGTGTAAGAACAAGGTTGAGGTCACAAAGAGGATTGTTGATTTTTGTGCAAGAAGTAGAGATAATGTCTATGGCGACCAAGATGATGAGTTATTTTGGAAGATGGGTGGAGCATATAGTGAGGAAAGAGCTTCGCTGGATGGAGAGAGCCATCCCAAAAAGTTCTTAGGGCCATTGTAG

Protein sequence

MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQLPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPVQVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDELFWKMGGAYSEERASLDGESHPKKFLGPL*

Homology

[Close]

BLAST of Chy6G118180 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-20
Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKI+GET +I  P TA EVT+ YP ++L +S+++K FG+R+KPL+P+  L+PK  YFL++
Sbjct: 15  MKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKTYFLVE 74

Query: 61  LPTFPRDHCSL--------RRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSST 120
           LP  P +  ++        RR  S +H + A +RL  L+LS R+VSD+   R D      
Sbjct: 75  LPKLPPETTAVDTENKLPYRRVMSGIH-VGAKERLDMLMLSRRTVSDVTIGRSDGGDGFG 134

Query: 121 DDGAAKPVQVKFQLPRVEFERLMKECKNKVE-VTKRIVDFCARSRDNVYGDQDDELFWKM 174
            +       V+ +LPR +  +LM+E  N    + ++I+         +Y ++  EL    
Sbjct: 135 PELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL--------GIYMERSGELGGGR 187

[Close]

BLAST of Chy6G118180 vs. ExPASy TrEMBL
Match: A0A0A0L7W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.2e-91
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGETIKITLPTTAYEVTSHYP+HLLYESKSLKLFGLRAKPLDPHC LEPKTLYFLLQ
Sbjct: 19  MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 78

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT PRDHCSLRR CSDLHNLSASDRL+CLLLS RS+SDLQTLRFDPQRSSTDDGAAKPV
Sbjct: 79  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 138

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDELFWKMGGAYS 177
           QVKFQLPR EFERLMKECKNKVEVTKRIVD+CARSRDNVYG+QDDELFWKMGGAYS
Sbjct: 139 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYS 194

[Close]

BLAST of Chy6G118180 vs. ExPASy TrEMBL
Match: A0A5A7V2M4 (Putative Encodes a protein whose expression is responsive to nematode infection OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00470 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.1e-70
Identity = 140/161 (86.96%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KITLPTTAYEVTSHYPNHLLYESKSL  FGLRAKPLDPHCQL PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT      SLRR CSDLH LSASDRL+CLLLS RSVSDLQTLRFDPQRSS  DGAAK V
Sbjct: 61  LPTLYGVDRSLRRTCSDLH-LSASDRLECLLLSRRSVSDLQTLRFDPQRSSIHDGAAKSV 120

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYG 162
           QVKFQLPR EFERLMKECKN VEVTK+IVDFCA+SRDNVYG
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCAKSRDNVYG 160

[Close]

BLAST of Chy6G118180 vs. ExPASy TrEMBL
Match: A0A1S3C4W5 (uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 9.1e-70
Identity = 140/161 (86.96%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KITLPTTAYEVTSHYPNHLLYESKSL  FGLRAKPLDPHCQL PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT      SLRR CSDLH LSASDRL+CLLLS RSVSDLQTLRFDPQRS   DGAAK V
Sbjct: 61  LPTLYGVDRSLRRTCSDLH-LSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSV 120

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYG 162
           QVKFQLPR EFERLMKECKN VEVTK+IVDFCARSRDNVYG
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCARSRDNVYG 160

[Close]

BLAST of Chy6G118180 vs. ExPASy TrEMBL
Match: A0A6J1K9N3 (uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC111492930 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44
Identity = 96/150 (64.00%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KI  PTTA++VT+H+PNHLLY+S+S+   GLRAKPLDPH QL+PKTLYFLL 
Sbjct: 19  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSINQLGLRAKPLDPHHQLKPKTLYFLLH 78

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LP  P  H  L R  SDL + SASDRL+CL+LS RS+SDLQ+ R DP   ST      PV
Sbjct: 79  LPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSLSDLQSFRLDPDGMSTASRPTGPV 138

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVD 151
           Q+K ++PR EFERLMKE K+KVE  +RIVD
Sbjct: 139 QIKLRVPREEFERLMKESKSKVEAAERIVD 167

[Close]

BLAST of Chy6G118180 vs. ExPASy TrEMBL
Match: A0A6J1G9F9 (uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC111452165 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 97/150 (64.67%), Postives = 114/150 (76.00%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KI  PTTA++VT+H+PNHLLY+S+S+   GLRAKPLDPH QL+PKTLYFLL 
Sbjct: 19  MKINGETFKIRTPTTAFQVTTHHPNHLLYDSQSITQLGLRAKPLDPHHQLKPKTLYFLLH 78

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LP  P  H  L R  SDL + SASDRL+CL+LS RSVSDLQ+ R DP   ST      PV
Sbjct: 79  LPPLPGSHRPLSRVRSDLCS-SASDRLECLMLSRRSVSDLQSFRLDPDGMSTACRPTGPV 138

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVD 151
           Q+K ++PR EFERLMKE K+KVE  +RIVD
Sbjct: 139 QIKLRVPREEFERLMKESKSKVEAAERIVD 167

[Close]

BLAST of Chy6G118180 vs. NCBI nr
Match: XP_004151549.1 (uncharacterized protein At1g66480 [Cucumis sativus])

HSP 1 Score: 345 bits (885), Expect = 3.44e-119
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGETIKITLPTTAYEVTSHYP+HLLYESKSLKLFGLRAKPLDPHC LEPKTLYFLLQ
Sbjct: 1   MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 60

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT PRDHCSLRR CSDLHNLSASDRL+CLLLS RS+SDLQTLRFDPQRSSTDDGAAKPV
Sbjct: 61  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 120

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDELFWKMGGAYS 176
           QVKFQLPR EFERLMKECKNKVEVTKRIVD+CARSRDNVYG+QDDELFWKMGGAYS
Sbjct: 121 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYS 176

[Close]

BLAST of Chy6G118180 vs. NCBI nr
Match: KAE8650631.1 (hypothetical protein Csa_011666, partial [Cucumis sativus])

HSP 1 Score: 345 bits (885), Expect = 5.63e-119
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGETIKITLPTTAYEVTSHYP+HLLYESKSLKLFGLRAKPLDPHC LEPKTLYFLLQ
Sbjct: 19  MKINGETIKITLPTTAYEVTSHYPSHLLYESKSLKLFGLRAKPLDPHCHLEPKTLYFLLQ 78

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT PRDHCSLRR CSDLHNLSASDRL+CLLLS RS+SDLQTLRFDPQRSSTDDGAAKPV
Sbjct: 79  LPTLPRDHCSLRRTCSDLHNLSASDRLECLLLSRRSLSDLQTLRFDPQRSSTDDGAAKPV 138

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDELFWKMGGAYS 176
           QVKFQLPR EFERLMKECKNKVEVTKRIVD+CARSRDNVYG+QDDELFWKMGGAYS
Sbjct: 139 QVKFQLPRAEFERLMKECKNKVEVTKRIVDYCARSRDNVYGNQDDELFWKMGGAYS 194

[Close]

BLAST of Chy6G118180 vs. NCBI nr
Match: XP_038887072.1 (uncharacterized protein At1g66480-like [Benincasa hispida])

HSP 1 Score: 287 bits (735), Expect = 9.12e-96
Identity = 146/176 (82.95%), Postives = 154/176 (87.50%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGE  KITLPTTAYEVT H+PNHLLYES+SL+ FGLRAKPLDPH QL+PKTLYFLLQ
Sbjct: 21  MKINGEAFKITLPTTAYEVTIHHPNHLLYESQSLEQFGLRAKPLDPHHQLKPKTLYFLLQ 80

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT   DHC LRR CSDLH LSASDRL+CLLLS RSVSDLQT+RFDPQR STD GAAKPV
Sbjct: 81  LPTLLGDHCPLRRVCSDLH-LSASDRLECLLLSRRSVSDLQTVRFDPQRLSTDGGAAKPV 140

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDELFWKMGGAYS 176
           QVKF+LPRVEFERLMKECKNKVE T+RIVDFC RSRDN  G QDDELF KMG A S
Sbjct: 141 QVKFRLPRVEFERLMKECKNKVEATERIVDFCGRSRDNGDGGQDDELFGKMGDACS 195

[Close]

BLAST of Chy6G118180 vs. NCBI nr
Match: KAA0060756.1 (putative Encodes a protein whose expression is responsive to nematode infection [Cucumis melo var. makuwa] >TYK01493.1 putative Encodes a protein whose expression is responsive to nematode infection [Cucumis melo var. makuwa])

HSP 1 Score: 275 bits (702), Expect = 1.52e-91
Identity = 140/161 (86.96%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KITLPTTAYEVTSHYPNHLLYESKSL  FGLRAKPLDPHCQL PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT      SLRR CSDLH LSASDRL+CLLLS RSVSDLQTLRFDPQRSS  DGAAK V
Sbjct: 61  LPTLYGVDRSLRRTCSDLH-LSASDRLECLLLSRRSVSDLQTLRFDPQRSSIHDGAAKSV 120

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYG 161
           QVKFQLPR EFERLMKECKN VEVTK+IVDFCA+SRDNVYG
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCAKSRDNVYG 160

[Close]

BLAST of Chy6G118180 vs. NCBI nr
Match: XP_008457131.1 (PREDICTED: uncharacterized protein At1g66480 [Cucumis melo])

HSP 1 Score: 273 bits (699), Expect = 4.36e-91
Identity = 140/161 (86.96%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKINGET KITLPTTAYEVTSHYPNHLLYESKSL  FGLRAKPLDPHCQL PKTLYFLLQ
Sbjct: 1   MKINGETFKITLPTTAYEVTSHYPNHLLYESKSLNQFGLRAKPLDPHCQLRPKTLYFLLQ 60

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LPT      SLRR CSDLH LSASDRL+CLLLS RSVSDLQTLRFDPQRS   DGAAK V
Sbjct: 61  LPTLYGVDRSLRRTCSDLH-LSASDRLECLLLSRRSVSDLQTLRFDPQRSLIHDGAAKSV 120

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYG 161
           QVKFQLPR EFERLMKECKN VEVTK+IVDFCARSRDNVYG
Sbjct: 121 QVKFQLPRAEFERLMKECKNNVEVTKKIVDFCARSRDNVYG 160

[Close]

BLAST of Chy6G118180 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 105.5 bits (262), Expect = 4.8e-23
Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKI+GET K+  P TA EV   +P H+L +S+S+K +G RAKPL+   +LE K LYF+++
Sbjct: 14  MKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAKQRLEAKRLYFVVE 73

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
               P   C  RR  S +H +SA +RL+ L+L+ RS SDL  L+  P   +T++      
Sbjct: 74  ----PVKECPPRRVRSGIH-VSAKERLESLMLARRSSSDLSILK-PPGGWTTEEEEGAVR 133

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVD-FCARSR 157
           +VK ++P+ E E+L+KE   + E T++I   F A+ R
Sbjct: 134 RVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQR 164

[Close]

BLAST of Chy6G118180 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 64/182 (35.16%), Postives = 102/182 (56.04%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKI+GET +I  P TA EVT+ YP ++L +S+++K FG+R+KPL+P+  L+PK  YFL++
Sbjct: 15  MKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKTYFLVE 74

Query: 61  LPTFPRDHCSL--------RRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSST 120
           LP  P +  ++        RR  S +H + A +RL  L+LS R+VSD+   R D      
Sbjct: 75  LPKLPPETTAVDTENKLPYRRVMSGIH-VGAKERLDMLMLSRRTVSDVTIGRSDGGDGFG 134

Query: 121 DDGAAKPVQVKFQLPRVEFERLMKECKNKVE-VTKRIVDFCARSRDNVYGDQDDELFWKM 174
            +       V+ +LPR +  +LM+E  N    + ++I+         +Y ++  EL    
Sbjct: 135 PELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL--------GIYMERSGELGGGR 187

[Close]

BLAST of Chy6G118180 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-21
Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           M INGE+ K+  P  A  V   +P H+L ES+++K  G+RAKPL+PH  LE K +YF+++
Sbjct: 14  MNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPHQNLESKRIYFMVE 73

Query: 61  LPTFPRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKPV 120
           LP   ++  + RR  S +  +SA +RL+ L LS RS SDL  ++   +++  +D   +  
Sbjct: 74  LPRTWKER-TPRRVRSGI-QMSAKERLENLKLSRRSSSDLSVMK---KKTEVNDEEREVS 133

Query: 121 QVKFQLPRVEFERLMKECKNKVEVTKRIVDFC 153
            VK +LP+ + E+L KE ++  + + +I   C
Sbjct: 134 SVKLKLPKWKIEKLRKESESGSDFSNKITQLC 160

[Close]

BLAST of Chy6G118180 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-20
Identity = 57/167 (34.13%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1   MKINGETIKITLPTTAYEVTSHYPNHLLYESKSLKLFGLRAKPLDPHCQLEPKTLYFLLQ 60
           MKI+G+  ++  P TA + T  YP  +L +S+++K  G+RAKPL+P+  L+P   YFL+ 
Sbjct: 15  MKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEPNQILKPNHTYFLVD 74

Query: 61  LPTF-PRDHCSLRRACSDLHNLSASDRLQCLLLSSRSVSDLQTLRFDPQRSSTDDGAAKP 120
           LP    R+    RR  S   ++ A +RL+ L+LS R+VSD+   R D      + G  + 
Sbjct: 75  LPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARSDVVGDGPELGHTR- 134

Query: 121 VQVKFQLPRVEFERLMKECKNKVEVTKRIVDFCARSRDNVYGDQDDE 167
             V+ +LPR +  +LM+E  +  EV  +I+     S   + G +D++
Sbjct: 135 --VRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGRDND 178

The following BLAST results are available for this feature:

BLAST of Chy6G118180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLC8	2.2e-20	35.16	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of Chy6G118180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7W0	3.2e-91	94.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G368690 PE=4 SV=1	[more]
A0A5A7V2M4	4.1e-70	86.96	Putative Encodes a protein whose expression is responsive to nematode infection ...	[more]
A0A1S3C4W5	9.1e-70	86.96	uncharacterized protein At1g66480 OS=Cucumis melo OX=3656 GN=LOC103496878 PE=4 S...	[more]
A0A6J1K9N3	8.6e-44	64.00	uncharacterized protein At1g66480-like OS=Cucurbita maxima OX=3661 GN=LOC1114929...	[more]
A0A6J1G9F9	1.1e-43	64.67	uncharacterized protein At1g66480-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Chy6G118180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151549.1	3.44e-119	94.32	uncharacterized protein At1g66480 [Cucumis sativus]	[more]
KAE8650631.1	5.63e-119	94.32	hypothetical protein Csa_011666, partial [Cucumis sativus]	[more]
XP_038887072.1	9.12e-96	82.95	uncharacterized protein At1g66480-like [Benincasa hispida]	[more]
KAA0060756.1	1.52e-91	86.96	putative Encodes a protein whose expression is responsive to nematode infection ...	[more]
XP_008457131.1	4.36e-91	86.96	PREDICTED: uncharacterized protein At1g66480 [Cucumis melo]	[more]

BLAST of Chy6G118180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01340.1	4.8e-23	40.76	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT1G66480.1	1.6e-21	35.16	plastid movement impaired 2	[more]
AT1G71015.1	4.5e-21	36.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G37840.1	1.0e-20	34.13	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 2..94 e-value: 1.5E-12 score: 48.3
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..156
None	No IPR available	PANTHER	PTHR33148:SF3	PLASTID MOVEMENT IMPAIRED PROTEIN	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy6G118180.1	Chy6G118180.1	mRNA