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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGGGGATTGTTTGAAGGGAGGTAATTATGAGAACAATCCCAATTGTTTGTAGGTCTTTGTGATCATATTGAAATTCTTCCAGATCTAATCCCTCACGCATAAATGCTTAGTCTTAGTTACTTAAATCTAGAGTTTGTTGTTAGATATTTATTTGCATTTTCAAGTGAATGTTCTCATCAGACCCTTCTCTTGATATGTGTTAAACAATCAATACCGACATCCATTTAGTTGGAGAGATCCTTCAGTTAAACAAGCCTTGTCCAGTATGAGGTGATATGAATTTATATCAGCTGGTAGTAGTCCATTTCTTGAATCTTCTGCAGGCCATCTTTGACTTTTGCAAGCCATGCCAACTTGAACGCCCCTGGGAAGGAAGCCAGGCAAATAGATCACTTCGGCCTCAGAAGCGATAGATCACTTATGGAATATGGATGCAACATCGCCCTGAAGTCCTATTCTGTAGTTTATTGTCCTTATCTTTATTGA mRNA sequence ATGCGGGGATTGTTTGAAGGGAGGCCATCTTTGACTTTTGCAAGCCATGCCAACTTGAACGCCCCTGGGAAGGAAGCCAGGCAAATAGATCACTTCGGCCTCAGAAGCGATAGATCACTTATGGAATATGGATGCAACATCGCCCTGAAGTCCTATTCTGTAGTTTATTGTCCTTATCTTTATTGA Coding sequence (CDS) ATGCGGGGATTGTTTGAAGGGAGGCCATCTTTGACTTTTGCAAGCCATGCCAACTTGAACGCCCCTGGGAAGGAAGCCAGGCAAATAGATCACTTCGGCCTCAGAAGCGATAGATCACTTATGGAATATGGATGCAACATCGCCCTGAAGTCCTATTCTGTAGTTTATTGTCCTTATCTTTATTGA Protein sequence MRGLFEGRPSLTFASHANLNAPGKEARQIDHFGLRSDRSLMEYGCNIALKSYSVVYCPYLY*
Homology
BLAST of Chy6G115720 vs. ExPASy TrEMBL
Match: A0A5D3CS50 (Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00610 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.1e-04 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 Query: 32 FGLRSDRSLMEYGCNIALKSYSVV 56 FGLRSDRSLMEYGCNIALKSYSVV Sbjct: 321 FGLRSDRSLMEYGCNIALKSYSVV 344
BLAST of Chy6G115720 vs. ExPASy TrEMBL
Match: A0A5A7T752 (Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001120 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.1e-04 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 Query: 32 FGLRSDRSLMEYGCNIALKSYSVV 56 FGLRSDRSLMEYGCNIALKSYSVV Sbjct: 320 FGLRSDRSLMEYGCNIALKSYSVV 343
BLAST of Chy6G115720 vs. NCBI nr
Match: KAA0037199.1 (pathogenesis-related homeodomain protein [Cucumis melo var. makuwa]) HSP 1 Score: 52.8 bits (125), Expect = 5.60e-06 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 Query: 32 FGLRSDRSLMEYGCNIALKSYSVV 55 FGLRSDRSLMEYGCNIALKSYSVV Sbjct: 320 FGLRSDRSLMEYGCNIALKSYSVV 343
BLAST of Chy6G115720 vs. NCBI nr
Match: TYK13874.1 (pathogenesis-related homeodomain protein [Cucumis melo var. makuwa]) HSP 1 Score: 52.8 bits (125), Expect = 5.60e-06 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 Query: 32 FGLRSDRSLMEYGCNIALKSYSVV 55 FGLRSDRSLMEYGCNIALKSYSVV Sbjct: 321 FGLRSDRSLMEYGCNIALKSYSVV 344
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CS50 | 6.1e-04 | 100.00 | Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T752 | 6.1e-04 | 100.00 | Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |
KAA0037199.1 | 5.60e-06 | 100.00 | pathogenesis-related homeodomain protein [Cucumis melo var. makuwa] | [more] |
TYK13874.1 | 5.60e-06 | 100.00 | pathogenesis-related homeodomain protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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