Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGTACTTCCTTTTTCATCCCAACACGAACATAGCTCAGTCTTTGTAGTCGCTATTACATTCTAGGTCGTAGGTTCAAATCTCAGCTATCAGAGTGGCATGTACTGTTTCAATTTTTCAATCACTTGGGTATTGTCCAATCTTCAAGATCAATAGGTTCTTTAAATTTCTCTGTTGTGTCTATGAATTCAAATAAGATTGATCAATTTGCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGGTTAAGGATTATAAGAATTTAAGGAAAAGGGTTATCAGAATTCTGATTATAAAAATTAAAAAAATAAAATAATAATTCTTTCACCAAGTATTAAGTTAATGGTGATAGCTGTACATTGAAGAAGATGAAGCAGAAAAAGAAGAAGCTATAGTATTAGGCTGTGTTAATTACTGGGTTGTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCTCTCCCCCTTTTGTGAAAAATTAATGGTTGTTTCTTCTAATAATATCACAATTTCATTACATATCTTCCACCGTTCTGTTTTTTTTTTTTTCCAATTTTTTTGTGGGTTGTGAGATGTAACTTTAGACAAGAGAGCTGTTTTGTGGAACATGCTCTGTTTTGTTTGTTGAGATCTGAATCTAACAAAAATCATCAGACTCTGCAAAAGGCTGAAGATGAGTTGAATTTATGTTTTGTTGTTTCTGAGTGTTCAGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA
mRNA sequence
ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA
Coding sequence (CDS)
ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA
Protein sequence
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAAAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSMRPKKDFEEYALNWHHCNGHMKKL*
Homology
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match:
A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 8.8e-62
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM
Sbjct: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
Query: 121 RPKK 125
RPKK
Sbjct: 121 RPKK 124
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match:
A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57
Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP PHVSLQALSHGVHYPTRPLATHEH A
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPRPHVSLQALSHGVHYPTRPLATHEH-A 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQV SNNH M
Sbjct: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLM 120
Query: 121 RPKK 125
RPKK
Sbjct: 121 RPKK 123
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match:
A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57
Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP PHVSLQALSHGVHYPTRPLATHEH A
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPRPHVSLQALSHGVHYPTRPLATHEH-A 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQV SNNH M
Sbjct: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLM 120
Query: 121 RPKK 125
RPKK
Sbjct: 121 RPKK 123
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match:
A0A6J1GWJ8 (uncharacterized protein LOC111457805 OS=Cucurbita moschata OX=3662 GN=LOC111457805 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALE EDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHG H+PTRPLA HEHA
Sbjct: 1 MEVALEFEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGGHHPTRPLAGHEHA- 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AY+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ SNNH M
Sbjct: 61 ----TIAYSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLM 119
Query: 121 RPKK 125
RPKK
Sbjct: 121 RPKK 119
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match:
A0A6J1F5U9 (uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC111441102 PE=4 SV=1)
HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46
Identity = 108/132 (81.82%), Postives = 117/132 (88.64%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP-HPHVSLQALSHGVHYPTRPLATHEHA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP HPHVSLQAL+HG H P RPLA H+
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHHPHVSLQALAHGGHQPARPLAVHDQ- 60
Query: 61 AAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHS 120
AAAA+ AY+GVSKGTGVFIPRSLQPARKQRRGR+NNIK NRQF I+IDVNSQV SNN+S
Sbjct: 61 AAAAIVVAYSGVSKGTGVFIPRSLQPARKQRRGRYNNIKANRQFPIAIDVNSQV-SNNNS 120
Query: 121 MRPKK--DFEEY 130
+RPKK FEE+
Sbjct: 121 LRPKKGQGFEEF 130
BLAST of Chy6G111310 vs. NCBI nr
Match:
XP_004134148.1 (uncharacterized protein LOC101209089 [Cucumis sativus] >XP_031738268.1 uncharacterized protein LOC101209089 [Cucumis sativus] >KGN57011.1 hypothetical protein Csa_011226 [Cucumis sativus])
HSP 1 Score: 245 bits (625), Expect = 2.79e-81
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM
Sbjct: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
Query: 121 RPKK 124
RPKK
Sbjct: 121 RPKK 124
BLAST of Chy6G111310 vs. NCBI nr
Match:
XP_008438708.1 (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo] >KAA0049384.1 uncharacterized protein E6C27_scaffold171G006290 [Cucumis melo var. makuwa] >TYK17175.1 uncharacterized protein E5676_scaffold434G00190 [Cucumis melo var. makuwa])
HSP 1 Score: 231 bits (588), Expect = 1.18e-75
Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP PHVSLQALSHGVHYPTRPLATHEHAA
Sbjct: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPRPHVSLQALSHGVHYPTRPLATHEHAA 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
AA VAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQV SNNH M
Sbjct: 61 AA-VAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHLM 120
Query: 121 RPKK 124
RPKK
Sbjct: 121 RPKK 123
BLAST of Chy6G111310 vs. NCBI nr
Match:
XP_038897791.1 (uncharacterized protein LOC120085708 [Benincasa hispida])
HSP 1 Score: 218 bits (556), Expect = 9.25e-71
Identity = 115/125 (92.00%), Postives = 118/125 (94.40%), Query Frame = 0
Query: 1 MEVA-LELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHA 60
MEVA LELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPL HE A
Sbjct: 1 MEVAALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLVAHEQA 60
Query: 61 AAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHS 120
AA VAAAY+GVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNS+V SNNHS
Sbjct: 61 TAA-VAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSRVSSNNHS 120
Query: 121 MRPKK 124
+RPKK
Sbjct: 121 IRPKK 124
BLAST of Chy6G111310 vs. NCBI nr
Match:
KAG6582281.1 (hypothetical protein SDJN03_22283, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 201 bits (512), Expect = 3.99e-64
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALE EDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHG H+PTRPLA HEHA
Sbjct: 1 MEVALEFEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGGHHPTRPLAGHEHAT 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
A Y+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ SNNH M
Sbjct: 61 VA-----YSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLM 119
Query: 121 RPKK 124
RPKK
Sbjct: 121 RPKK 119
BLAST of Chy6G111310 vs. NCBI nr
Match:
XP_022955970.1 (uncharacterized protein LOC111457805 [Cucurbita moschata] >XP_023528368.1 uncharacterized protein LOC111791310 [Cucurbita pepo subsp. pepo] >KAG7018685.1 hypothetical protein SDJN02_20556, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 201 bits (511), Expect = 5.67e-64
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAA 60
MEVALE EDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHG H+PTRPLA HEHA
Sbjct: 1 MEVALEFEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGGHHPTRPLAGHEHAT 60
Query: 61 AAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSM 120
A Y+ VSKGTGVFIPRSLQPARKQRRGR+NN+KPNRQF I+IDVNSQ SNNH M
Sbjct: 61 IA-----YSSVSKGTGVFIPRSLQPARKQRRGRNNNMKPNRQFQINIDVNSQASSNNHLM 119
Query: 121 RPKK 124
RPKK
Sbjct: 121 RPKK 119
BLAST of Chy6G111310 vs. TAIR 10
Match:
AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMDDNEDPLP------HPHVSLQALSHGVHYPTRPLA 60
M + LEL+DD+FFAD+S+Q+SLL+MD++E P +S Q L G Y T P
Sbjct: 1 MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRG-GYQTAPYM 60
Query: 61 THEHAAAAAVAAAYNGVSKGTGVFIPRSLQPARK----QRRGRHNNIKPNRQFHISIDVN 119
+ SKGTGVFIP+S QP R+ Q++GR+++ +Q S+ N
Sbjct: 61 YQQEQ------------SKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQH--SLHQN 113
BLAST of Chy6G111310 vs. TAIR 10
Match:
AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 58.9 bits (141), Expect = 3.8e-09
Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 0
Query: 1 MEVALELEDDLFFADLSRQLSLLLMD-DNEDPLP-HPHVSLQALSHGVHYPTRPLATHEH 60
M + LEL+DD+FFAD+S+QL+LL+ D D ++P+ VS Q L G +Y T AT
Sbjct: 1 MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRG-NYQTS--ATPYM 60
Query: 61 AAAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNH 120
+ SKGTGVFIPRS QP RK H + K +F S Q P + H
Sbjct: 61 MYNEQINYNVIRESKGTGVFIPRSSQPRRK--HNHHPHQKKQGRFIGSFIPKQQFPHHGH 120
Query: 121 --SMRPKKDFEEYALNWHHCNGHMKK 143
++ + + ++ +HH + + ++
Sbjct: 121 DNNLTTLNNNNQESITFHHASTNPRR 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LAE7 | 8.8e-62 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1 | [more] |
A0A5D3D068 | 1.7e-57 | 96.77 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3AX25 | 1.7e-57 | 96.77 | uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=... | [more] |
A0A6J1GWJ8 | 1.9e-48 | 83.87 | uncharacterized protein LOC111457805 OS=Cucurbita moschata OX=3662 GN=LOC1114578... | [more] |
A0A6J1F5U9 | 1.4e-46 | 81.82 | uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC1114411... | [more] |
Match Name | E-value | Identity | Description | |
XP_004134148.1 | 2.79e-81 | 100.00 | uncharacterized protein LOC101209089 [Cucumis sativus] >XP_031738268.1 uncharact... | [more] |
XP_008438708.1 | 1.18e-75 | 96.77 | PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo] >KAA0049384.1 unc... | [more] |
XP_038897791.1 | 9.25e-71 | 92.00 | uncharacterized protein LOC120085708 [Benincasa hispida] | [more] |
KAG6582281.1 | 3.99e-64 | 83.87 | hypothetical protein SDJN03_22283, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022955970.1 | 5.67e-64 | 83.87 | uncharacterized protein LOC111457805 [Cucurbita moschata] >XP_023528368.1 unchar... | [more] |
Match Name | E-value | Identity | Description | |
AT5G19190.1 | 2.6e-10 | 37.50 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G06070.1 | 3.8e-09 | 34.93 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |