Chy6G111310 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGTACTTCCTTTTTCATCCCAACACGAACATAGCTCAGTCTTTGTAGTCGCTATTACATTCTAGGTCGTAGGTTCAAATCTCAGCTATCAGAGTGGCATGTACTGTTTCAATTTTTCAATCACTTGGGTATTGTCCAATCTTCAAGATCAATAGGTTCTTTAAATTTCTCTGTTGTGTCTATGAATTCAAATAAGATTGATCAATTTGCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGGTTAAGGATTATAAGAATTTAAGGAAAAGGGTTATCAGAATTCTGATTATAAAAATTAAAAAAATAAAATAATAATTCTTTCACCAAGTATTAAGTTAATGGTGATAGCTGTACATTGAAGAAGATGAAGCAGAAAAAGAAGAAGCTATAGTATTAGGCTGTGTTAATTACTGGGTTGTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCTCTCCCCCTTTTGTGAAAAATTAATGGTTGTTTCTTCTAATAATATCACAATTTCATTACATATCTTCCACCGTTCTGTTTTTTTTTTTTTCCAATTTTTTTGTGGGTTGTGAGATGTAACTTTAGACAAGAGAGCTGTTTTGTGGAACATGCTCTGTTTTGTTTGTTGAGATCTGAATCTAACAAAAATCATCAGACTCTGCAAAAGGCTGAAGATGAGTTGAATTTATGTTTTGTTGTTTCTGAGTGTTCAGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA ATGGAAGTTGCTTTAGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGATAATGAAGACCCTCTCCCTCATCCCCATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTACCCGACACGGCCACTGGCTACACATGAACATGCCGCCGCAGCCGCCGTTGCCGCTGCCTACAACGGCGTAAGCAAGGGCACCGGTGTGTTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAATAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTACCTTCCAACAACCATTCGATGCGTCCTAAAAAGGATTTTGAAGAATATGCTCTTAACTGGCATCACTGCAATGGGCACATGAAGAAGCTTTGA MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHAAAAAVAAAYNGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVPSNNHSMRPKKDFEEYALNWHHCNGHMKKL* Homology
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match: A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 8.8e-62 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match: A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match: A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match: A0A6J1GWJ8 (uncharacterized protein LOC111457805 OS=Cucurbita moschata OX=3662 GN=LOC111457805 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48 Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
BLAST of Chy6G111310 vs. ExPASy TrEMBL
Match: A0A6J1F5U9 (uncharacterized protein LOC111441102 OS=Cucurbita moschata OX=3662 GN=LOC111441102 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46 Identity = 108/132 (81.82%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of Chy6G111310 vs. NCBI nr
Match: XP_004134148.1 (uncharacterized protein LOC101209089 [Cucumis sativus] >XP_031738268.1 uncharacterized protein LOC101209089 [Cucumis sativus] >KGN57011.1 hypothetical protein Csa_011226 [Cucumis sativus]) HSP 1 Score: 245 bits (625), Expect = 2.79e-81 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Chy6G111310 vs. NCBI nr
Match: XP_008438708.1 (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo] >KAA0049384.1 uncharacterized protein E6C27_scaffold171G006290 [Cucumis melo var. makuwa] >TYK17175.1 uncharacterized protein E5676_scaffold434G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 231 bits (588), Expect = 1.18e-75 Identity = 120/124 (96.77%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Chy6G111310 vs. NCBI nr
Match: XP_038897791.1 (uncharacterized protein LOC120085708 [Benincasa hispida]) HSP 1 Score: 218 bits (556), Expect = 9.25e-71 Identity = 115/125 (92.00%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Chy6G111310 vs. NCBI nr
Match: KAG6582281.1 (hypothetical protein SDJN03_22283, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 201 bits (512), Expect = 3.99e-64 Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
BLAST of Chy6G111310 vs. NCBI nr
Match: XP_022955970.1 (uncharacterized protein LOC111457805 [Cucurbita moschata] >XP_023528368.1 uncharacterized protein LOC111791310 [Cucurbita pepo subsp. pepo] >KAG7018685.1 hypothetical protein SDJN02_20556, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201 bits (511), Expect = 5.67e-64 Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 0
BLAST of Chy6G111310 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10 Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of Chy6G111310 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 3.8e-09 Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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