Chy6G107940 (gene) Cucumber (hystrix) v1

Overview
NameChy6G107940
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTF-B3 domain-containing protein
LocationchrH06: 1788535 .. 1792474 (-)
RNA-Seq ExpressionChy6G107940
SyntenyChy6G107940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTTCTCTCTGAATTTGTTAGGTTTGTGAGAGGTGAGTTTGGTTGCTTCGCAGTTGCTAAATTTTCATTAGTTAAAAAAAAAAAAAAAAAAAACTTCAACAATGTTAGGTTATCAATGCCTTAGTTAAATGAGTTCTACTGTATAAGCATTTCATCATCTAGGTATGGTTGTTGACTACTCGACCATAGGTTAAATGTTACTTCCTACTAAAATGTTATAAATTTAGGAATAGTTTGGCATACCAACTTCTTAAGTTGGCATAAACTCAACTTCAATGGTAAACACTATGGAATTTTGATTGAGTTTGTAATCGATAGTTATAATACTTGGTTTTGATTGAGTTTGTAATCAATTTTAGGTTGTAAGCATATTTTGTTCGACATGACCTTTACATTCAAGAGTTTGATATTCGAAATTCTAGTAATGCTTTTAGTTATTCCATTTCTTAAGTTGATGTAAACAACTCAACTTCAACTATAAACACGGTTGAATTTTGGTTGAATATGTAGTCCATGGTTAATCAAAATAATTCAATTTTAGGCTGTAAACATATTTTGTCCGACATAGCCTCTATGATCAAGAGATTTGATATTTGAAATTCTACCTATGCACAAAGATTTTGGATTTTTTATTTGTGAAGAGTGCTTTTATATCATTTTGATTGAATGTTATTTTCTTAGAGAAAGGGACATTCCAAACAACTCTTTTAAAGTAGAATAACTCTAAGTTATTCCACTTTTGAATGAGTGAGACATTGTTTCAAGGAAGTAAATGAACGATTTTCCGACACATTTAAGACATACTTGACAAAAATATTAAAAAAGATGAAGTGTAATAGGATTTTCGGACACATTTAAGACATACTTGACAAAAATATTAAAAAAGATGAAGTGTAATAGAATCTTGTTTTTAGAGATTTTGTTATAATGATTTGTTAATTTTTCTATTTTTAAAAAAACTTAATTTTTCAGATTCTATTAGTAGCTAACTTTGAGATTTTATTAGTAACTGAATTTGATAGACATAAGTTTCGATATAATCTAAAATTTTGCTCTAACTTGTAAATACTTTAATGTAATTTGCTATTTAATTTTTTTTTTTATAAAATTGGAAAAAACCACGCTATTTAAACTCATTCTCAAAGACTCTTTAACAAGAGATAATCGTCTTAAATGGTAAAATTGGTAAAAATATTTATAAACATAACAAAAAAAATGAAAATGCTTGGAACATAATTTGATTTATATAAATTAAATAAACCCAAACAAATAATTTAAAGTGGCTTTGTAGCAATTTGAATTGTTTTAGATGTTTGGGTGTTAAAATATTTTTTACTTTTTTTTTTGTTTTAAATAGTCTATAAATTTTTGTTATATTTATAAATATTTCAACCGATCTAATCATTTAAAACAATTTCAAAAATAAAGTTAAAAAGGGAAATTGTTAAAAACAAAATATTTGACAAAATAATTATACTTTACACCCAAAATTGTAATAATTTTTGTTCTTCGTGTTTTTGTTTTATGGAGTGTAAATAGTTTGTTTTTTTTTTTGAAAAAAACTTTAACCCAACCGTAAGGAGTTTAAAAAAAAACAATAATAAAAATCAAACTATCTACCTTCAAAAGAAAATACAAAAATCTAATATTCTATTTTCTAAAAAAAAATATTTGGTCAATTTTACTCCTTTTTGACATTTTTTTTATTAATAAGAAAATTTAAAATATTTATAAATATAGCCAAATATAATATAATATTGAGTAAATATAATATGAATAGAAGTTTATCGCATTTTACAATCCTAAATATTTTGATTTATTTTAAATTTAAAACAACCCTAAAAATACAAAAAATTTCCCTCGTTCAAACTCAAAATAAGGAACATGAATGATCCGAAGAAAATACGGCGAGTGATTGTCTCTCCATCTGCTTCCTTCGAGCCCACAGGTTGTTGAACACTGAACTAATATATTTATTTATTTTTCCTTTGAATTCCATTCCCCTTTGTTCATTCTCCATGTTTTGTTTGGATTCCCAGTAAATTTCTTGTTTAATTTTAACCTTAATTTTGTTGTTGAATTTGTTCTGCTAACTTTCATCATTTGCAGGTTTTTTTCCCGACCTGTAATCGGCAATTCATACGTTGTCCCATTTGTAGGCTTCTGCAAGTGGTTTGTACTGAAAAAAGGTCCGCAGATGCAGTCAGCAAGGAAACCTCCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCGGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTAAGTTCTTCCTCTTATTTAAATCACTCAGAGGTTTGAGAATAATTAGAATTACGTGGTAAGCTGGATTTGCTAGAAGGTAGAAAGTTGCTGATTAGCTTGGACCGTTTATGGCTGAAATTTTGAACTGACTCTAACAATAGTCAAGCATTATGTTGTAACAAACAAAACTTGAGGGAGACACAAAGATCGTTAACCTAGTTTAGTGCATGATCACATATACTATCAGTGCATGATCACATATACTATCAGTGCATGATCACATACTATGGGGGCATTACGCTTCAATTACTACTAAATATTTCAAAGACTCTCCTATGGGGATTCGTGTATAACCTACTTTTCAATTTCAACTTAGGCTCTCCCGAAAATTTGAGATCCACTTACTCCCACAAATACACTTCTCCCATACTTTGTTTGAGTTCCCTCAAAACAAACTTACTTATAAAATAAATTTGAGTTTCTCTAAGTTACTCCCACAAATACACTTAGAGTTTCTCTAAGTGTGAGGTCCCCTCACCTTTATAAAATAATTTTTCCTCAACTAAGTATGAAATCCTCTCAATACAATTACAATGGAACTTAGGCTTCTGTAGTATGAGAGGTACTCTTTTTCACTCAAGTGATTGACAACAAATAACACTTCAGCCCAGTCTAAATTACTATCGGCAACACCCTCAACAGTGAGGTTCAGAAAGTTCGCAATCAGTACATAAAGGAGTTTGACATGAATGTTCTTTAAAAAACTTAAATCATGTTTTCTATTGGACTGAAAGAAAATCTGTTACACTACATGGAACATGATGCTTGGCATAGTACAAGACATGTTGTAGAACATGTTACTCAAGTTATGCCAGTAACAAGATCAGTCAATCAGTCTGTCGTAACAATGACCAATCTAGAAAGTAGTTGACTAGTTTGAGGGATCATCCATTGTTTTGGCATCTTTTTTGTTATTATTATTTCTTAAAGAAACATTTGGAGAGAAACTTGCAAGATTAGCTATTCCGGAAACTATTACAAAAAAAGTTCAAAAAAATAATTGGAAACTATTATAAAAACAGTTCAGAACAAAAATTTGGAAAAATGAGTCCAGAATTTCAGATAGCTACTGTAAAAGTTGGCCTTCTATTATTGGGTTTTTTTAAAAATATTTATTTTGAAAACTCTCAACAATGATTACGACTTGACAGTACCCAATTCTTAGGTAATGCCAAATGCTCAAATTAGGCATTTTTTAAGCATGTAAATAAATCAGCTTAACTGTGAAGTGGTATCATATCTTTACTTGTAGGTTTTACCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATCATGGAAACCGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAG

mRNA sequence

ATGCTTCTTCTCTCTGAATTTGTTAGGTTTTTTTCCCGACCTGTAATCGGCAATTCATACGTTGTCCCATTTGTAGGCTTCTGCAAGTGGTTTGTACTGAAAAAAGGTCCGCAGATGCAGTCAGCAAGGAAACCTCCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCGGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTACCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATCATGGAAACCGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAG

Coding sequence (CDS)

ATGCTTCTTCTCTCTGAATTTGTTAGGTTTTTTTCCCGACCTGTAATCGGCAATTCATACGTTGTCCCATTTGTAGGCTTCTGCAAGTGGTTTGTACTGAAAAAAGGTCCGCAGATGCAGTCAGCAAGGAAACCTCCGACAGAGCTTCCAACAATGGAGCCGCAAAATGGAGAAACTATGCCACTTTCGGGCAAACCCTACCATGCTTTTATTCTTTCTAAATCGCATGTTGCTCCCATATATAATTTGGTTTTACCGGCTAAATTTCATTCTATTTTACCTGCTATTGTCATCCCTGCGGTTCTTTTATGTCGAGGCAAGAAATGGAAGATAGATTATCATGGAAACCGACGTGGTAAGGCACTCGATTCAAAACAGTGGAGGAAATTTGTTAATGATAATTGTCTCAAATCTGGAGATGCTTGTGTATTTGAGCTCTTGGAGTGCAGCAGCAGCATACTTAAATTTAGAGTTCAAATTCTCAGTGGTGACATACCTTTGGAGCTGCACGACAAGTTCAGTGGGGAGACAAAAGAGACCCCCATACACCTTGACTAG

Protein sequence

MLLLSEFVRFFSRPVIGNSYVVPFVGFCKWFVLKKGPQMQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRVQILSGDIPLELHDKFSGETKETPIHLD*
Homology
[Close]
BLAST of Chy6G107940 vs. ExPASy Swiss-Prot
Match: Q7XLP4 (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-21
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 0 

Query: 44  KPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL 103
           +PP   P    ++G  +PL GKPY   I+ KSHV P + +V+P  F  +LP+   PA L 
Sbjct: 70  RPPEPEPEKVARHG-VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLS 129

Query: 104 CRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELL---ECSSSILKFRVQI 163
            RG+ W + + G R  + L++  WR F  DN L+ GD CVFELL         ++FRVQ+
Sbjct: 130 WRGRSWGMRFTGGRLIQRLEA-GWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQV 189

Query: 164 LSGDIPLELHDKFSGETKETPIHLD 186
           L  +IP  +  +  G T  TPI +D
Sbjct: 190 LRAEIPARIRGRAGGYTSATPIVID 212

[Close]
BLAST of Chy6G107940 vs. ExPASy Swiss-Prot
Match: Q9LHY9 (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 0 

Query: 45  PPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSIL--PAIVIPAVL 104
           PP    + E     T   +G P+   +++KSH+ P + + +P +F   L  P     AVL
Sbjct: 33  PPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVL 92

Query: 105 LCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLEC-SSSILKFRVQIL 164
              GK W   Y G+ + K LD+  W +F  DN L  GDACVFEL+   ++  L+F+VQIL
Sbjct: 93  HSGGKSWATSYCGHLKMKKLDA-GWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQIL 152

Query: 165 SGDIPLELHDKFSGETKETPI 183
            G +P E+     G T + PI
Sbjct: 153 RGGLPAEVVTS-KGLTSDQPI 171

[Close]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match: A0A0A0L3V3 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.8e-79
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDA VFELLECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 186
           QILSGDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match: A0A6J1IDC2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LOC111472772 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.3e-61
Identity = 114/147 (77.55%), Postives = 127/147 (86.39%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSSS+LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 186
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match: A0A6J1FTK2 (B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=LOC111447171 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPP E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 186
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match: A0A6J1D033 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111016130 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.5e-58
Identity = 108/147 (73.47%), Postives = 126/147 (85.71%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPP+E  TMEP+N E  PLS KP+H  IL+KSHVAPIYN+ LPAKFHS+LPAIVI
Sbjct: 1   MQSQEKPPSEHTTMEPRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
             VL C GK+W +DY+GNRRGK+LD++ WRKFVNDN LKSGDACVFEL+ECSSS LKFRV
Sbjct: 61  HGVLYCGGKEWTVDYYGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 186
           QIL GDIP++LHDKFSGE+K+TPI +D
Sbjct: 121 QILRGDIPVQLHDKFSGESKDTPIKID 147

[Close]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match: A0A6J1CYN6 (B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN=LOC111015996 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.8e-51
Identity = 96/147 (65.31%), Postives = 121/147 (82.31%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPP+E   MEP+  E  PLS KP+H  IL KSHVAP Y + LPAKFHS+LPAIVI
Sbjct: 1   MQSQEKPPSEPAEMEPRIDEIFPLSNKPFHGVILGKSHVAPAYLMSLPAKFHSVLPAIVI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
             V+ C GK+W++DY+GNRRG+ LD++ WRKFV++N LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  HGVVYCGGKEWRVDYYGNRRGRTLDTRGWRKFVDENHLKYGDACVFELMECSSSMVKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 186
           QIL GDIP++LHDKF GE+++TPI++D
Sbjct: 121 QILRGDIPVQLHDKFRGESRDTPINID 147

[Close]
BLAST of Chy6G107940 vs. NCBI nr
Match: XP_011650806.1 (B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothetical protein Csa_010770 [Cucumis sativus])

HSP 1 Score: 301 bits (770), Expect = 2.48e-102
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI
Sbjct: 1   MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDA VFELLECSSSILKFRV
Sbjct: 61  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 185
           QILSGDIPLELHDKFSGETKETPIHLD
Sbjct: 121 QILSGDIPLELHDKFSGETKETPIHLD 147

[Close]
BLAST of Chy6G107940 vs. NCBI nr
Match: XP_038903804.1 (B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida])

HSP 1 Score: 268 bits (685), Expect = 2.24e-89
Identity = 128/147 (87.07%), Postives = 139/147 (94.56%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS RKPPTELPTMEPQ+GE +PLSGKPYHAFILSKSHVAPI +LVLPAKFHSILPAIVI
Sbjct: 1   MQSQRKPPTELPTMEPQDGEILPLSGKPYHAFILSKSHVAPICSLVLPAKFHSILPAIVI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C+GKKW IDY+GNRRGKALD+KQWRKFVNDN LKSGDACVFEL+ECSSSILKFRV
Sbjct: 61  PAVLFCQGKKWTIDYYGNRRGKALDTKQWRKFVNDNRLKSGDACVFELMECSSSILKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 185
           QIL GDIP +LHDKFSGETK+TPI+L+
Sbjct: 121 QILRGDIPFQLHDKFSGETKDTPIYLE 147

[Close]
BLAST of Chy6G107940 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 242 bits (618), Expect = 3.59e-79
Identity = 114/147 (77.55%), Postives = 127/147 (86.39%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSSS+LKFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 185
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]
BLAST of Chy6G107940 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG6597214.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028685.1 B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241 bits (614), Expect = 1.46e-78
Identity = 112/147 (76.19%), Postives = 127/147 (86.39%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPPTE   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ +PAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPTEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 185
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]
BLAST of Chy6G107940 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 239 bits (610), Expect = 5.94e-78
Identity = 112/147 (76.19%), Postives = 126/147 (85.71%), Query Frame = 0 

Query: 39  MQSARKPPTELPTMEPQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVI 98
           MQS  KPP E   M+PQN   +PLSGKPYH  ILSKSHVAPI N+ LPAKFHS+LPAI+I
Sbjct: 1   MQSQEKPPPEPTEMQPQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMI 60

Query: 99  PAVLLCRGKKWKIDYHGNRRGKALDSKQWRKFVNDNCLKSGDACVFELLECSSSILKFRV 158
           PAVL C GKKWKIDY+GNRRGKALD+KQWRKFVNDN LK GDACVFEL+ECSSS++KFRV
Sbjct: 61  PAVLYCEGKKWKIDYYGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRV 120

Query: 159 QILSGDIPLELHDKFSGETKETPIHLD 185
           QIL GDIP ELH+KFSGE++ TPI +D
Sbjct: 121 QILRGDIPFELHEKFSGESRNTPILID 147

[Close]
BLAST of Chy6G107940 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04
Identity = 30/95 (31.58%), Postives = 44/95 (46.32%), Query Frame = 0 

Query: 72  LSKSHVAPIYNLVLPAKFHSILPAIVIPAVLL-CRGKKWKIDYH-GNRRGKALDSKQWRK 131
           + +SHV     L +P K+      I    V++     KW++ ++    RG    S  W+K
Sbjct: 227 MKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKK 286

Query: 132 FVNDNCLKSGDACVFELLECSSSILKFRVQILSGD 165
           FV DN L+ GD CVFE     +  L   V I  G+
Sbjct: 287 FVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGE 321

The following BLAST results are available for this feature:
BLAST of Chy6G107940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7XLP47.2e-2139.31B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399... [more]
Q9LHY91.9e-1336.17B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399... [more]
BLAST of Chy6G107940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V37.8e-7999.32TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 ... [more]
A0A6J1IDC23.3e-6177.55B3 domain-containing protein Os04g0386900-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FTK22.8e-6076.19B3 domain-containing protein Os04g0386900-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1D0334.5e-5873.47B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN... [more]
A0A6J1CYN61.8e-5165.31B3 domain-containing protein Os04g0386900-like OS=Momordica charantia OX=3673 GN... [more]
BLAST of Chy6G107940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650806.12.48e-10299.32B3 domain-containing protein Os04g0386900 [Cucumis sativus] >KGN56625.1 hypothet... [more]
XP_038903804.12.24e-8987.07B3 domain-containing protein Os04g0386900-like [Benincasa hispida] >XP_038903811... [more]
XP_022974195.13.59e-7977.55B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.... [more]
XP_023539026.11.46e-7876.19B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo] >KAG... [more]
XP_022941967.15.94e-7876.19B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197... [more]
BLAST of Chy6G107940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33280.12.1e-0431.58AP2/B3-like transcriptional factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 72..164
e-value: 2.1E-4
score: 30.7
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 73..158
e-value: 1.5E-10
score: 40.8
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 68..164
score: 11.504653
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 71..162
e-value: 1.25747E-13
score: 61.5749
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 55..163
e-value: 2.2E-17
score: 64.9
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 64..160
IPR044837B3 domain-containing protein REM16-likePANTHERPTHR31391B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATEDcoord: 36..178
NoneNo IPR availablePANTHERPTHR31391:SF64B3 DOMAIN-CONTAINING PROTEIN OS04G0386900coord: 36..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy6G107940.1Chy6G107940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding