Chy5G090590 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G090590
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH05: 119088 .. 119579 (-)
RNA-Seq Expression	Chy5G090590
Synteny	Chy5G090590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACCCAGAAGCAGGAAGGGGGGAAAATTACCAGAGAGAAAGTCAATCGGAAGCATAGTCGTAAGAAGAGAGATCGGAGTCAGAGGAATAGTAGTAATAGTAGAAAGAACCAGGTGGAGGAACACAGAATAGGGTCCAAAGAGAGAGGGCAAGGCGAGAAAGCTGTTGAAGAGGGAAAGCGAAGAGAAGGTAAAGAAGTTGGTGGCTGGTGAGGGGATCAGGAAAGCGAGCAATGGACTGCGAAGCATCCGCCGATAAATGAGCGACCGATAACACTATAAAGCTGCTAAATACCATGGCTTAGTCAGATTAATATTCCTGATTTACTGATTAGGCTCTCCGTTCTGGAAGAAGTGTCTGTTTTTCGGCTTCCATTTGACTTTGGCCTTCCCCTTTTTGATCCCTTCGCTGCGTTTTCCTTTCCTAATTTGGTGCCCAAATCTGTTGTTGTGGCGACGGACTACTCCACAAGCGGGATTTCGGTGTAG

mRNA sequence

ATGAAAACCCAGAAGCAGGAAGGGGGGAAAATTACCAGAGAGAAAGTCAATCGGAAGCATAGTCGTAAGAAGAGAGATCGGAGTCAGAGGAATAGTAGTAATAGTAGAAAGAACCAGGTGGAGGAACACAGAATAGGGTCCAAAGAGAGAGGGCAAGGCGAGAAAGCTGTTGAAGAGGGAAAGCGAAGAGAAGGTAAAGAAGTTGGTGGCTGGCTCTCCGTTCTGGAAGAAGTGTCTGTTTTTCGGCTTCCATTTGACTTTGGCCTTCCCCTTTTTGATCCCTTCGCTGCGTTTTCCTTTCCTAATTTGGTGCCCAAATCTGTTGTTGTGGCGACGGACTACTCCACAAGCGGGATTTCGGTGTAG

Coding sequence (CDS)

ATGAAAACCCAGAAGCAGGAAGGGGGGAAAATTACCAGAGAGAAAGTCAATCGGAAGCATAGTCGTAAGAAGAGAGATCGGAGTCAGAGGAATAGTAGTAATAGTAGAAAGAACCAGGTGGAGGAACACAGAATAGGGTCCAAAGAGAGAGGGCAAGGCGAGAAAGCTGTTGAAGAGGGAAAGCGAAGAGAAGGTAAAGAAGTTGGTGGCTGGCTCTCCGTTCTGGAAGAAGTGTCTGTTTTTCGGCTTCCATTTGACTTTGGCCTTCCCCTTTTTGATCCCTTCGCTGCGTTTTCCTTTCCTAATTTGGTGCCCAAATCTGTTGTTGTGGCGACGGACTACTCCACAAGCGGGATTTCGGTGTAG

Protein sequence

MKTQKQEGGKITREKVNRKHSRKKRDRSQRNSSNSRKNQVEEHRIGSKERGQGEKAVEEGKRREGKEVGGWLSVLEEVSVFRLPFDFGLPLFDPFAAFSFPNLVPKSVVVATDYSTSGISV*

Homology

The following BLAST results are available for this feature:

BLAST of Chy5G090590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G090590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G090590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G090590 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G090590.1	Chy5G090590.1	mRNA