Chy4G080060 (gene) Cucumber (hystrix) v1

InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Position :
0
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ATGAACTCGTTGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCAAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGATTGAAAAGTTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGCGTTGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATCGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACTACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCACCAGTGTTTTTGACCGACTTGGTCGTCAATCTCATGATCTGGATTTAACAGAGTCTAGTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAAAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACGTCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGAAATAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAAGATACACATAAGGATCAACCTTCGTTACCTGCAAATTCCTCACGTGAAATTTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAAGAGTTCCAGAAACCTCCATTATCTGCTAATGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCGTCATAGTAACGGATGCAACCACTGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTCGCAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCTGTTTCCTACTTCAAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG20040060080010001200140016001800Expect = 5.4E-22 / Score = 89.1Expect = 3.0E-18 / Score = 65.4Score = 17.591679Expect = 4.2E-7 / Score = 30.2Expect = 7.2E-25 / Score = 89.7Expect = 6.8E-10 / Score = 40.8Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = SequenceSM00360PF00076PS50102PF01480G3DSA:3.30.70.330G3DSA:1.20.1390.10mobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litemobidb-litePTHR14738:SF32PTHR14738SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 487..559
e-value: 5.4E-22
score: 89.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 488..556
e-value: 3.0E-18
score: 65.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 486..563
score: 17.591679
IPR002483PWI domainPFAMPF01480PWIcoord: 29..92
e-value: 4.2E-7
score: 30.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 395..567
e-value: 7.2E-25
score: 89.7
NoneNo IPR availableGENE3D1.20.1390.10PWI domaincoord: 15..96
e-value: 6.8E-10
score: 40.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..642
NoneNo IPR availablePANTHERPTHR14738:SF32RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 6..652
IPR040366Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14PANTHERPTHR14738ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14coord: 6..652
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 480..561