Chy4G080060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G080060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Nucleolin 1 isoform X1
Location	chrH04: 19412691 .. 19420474 (-)
RNA-Seq Expression	Chy4G080060
Synteny	Chy4G080060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCGTTGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCAAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGTACGGACTACTCTAACCTTTTAACATTCACGTACCTGAGTGGTTTTTGCCAAGCAATGAGATGCCTGGGTGTCTTAGAATTTCTCTTAGGTTATTCATGTGGAGGCCATCATCTTCTTCTTAACTGGTTGTTGAGGAATTTGTTTCGTTGAACAAATGGGAATTTAGTATTCTCGGGTTGTTATATATTTGCTATTGCCCAATGAAAATAACAAATAGTTCTGATTCTTTTATCTGTAAGTAATTACGTGCCTTAGGGGAAGTTTCTCTTATCTACTAAGGAATTCGCCGAAGGTTTATGGTTGATGTTAATGAGATGTATTCCAACTCAATGCCCATATATTGTTCTTCATCCAAAGAAAACTGCATCTTATAGCCTATTTAAAAATTTGGTTAGCCGTCATACTGTTTATCTGTCCGCCCCTCTTTCAGAAAACCTCTCTGTGCTAGGTGAACTTGCAACTGAGATAATTCCTTTAGCCTTTGATTGGCGGCTGTTTCCATTTCCCATCGATAAGATATAAGTACATTGAATTATTGAAATGAAAAGGAAGATTCTAATTAGCAAACAAATATTAGTGAAGTTACAGAATAGCATATAATTATAACCCAAATGTGATGATTAAAATAATGTTCTCCTAAATCAGCTAAGAAGAGTTGTTAACAACCTTGTAGAGGTAAGAGATTGAGATTGAGCGATTGGATGAAACGTGTCGTGCTCTTTGTATTTGGATTAGACTTTTCTGTTGAGGGTGTATCAATAATATTATTGTGAAGAAAGATCTTGGAGTGCTTGTAATATCTTACATGAGGGTGTTTCAAGAGTTCTAAAAGAATTTAGTGGCAAATCCACTGTGTTTTTTATCCACTCCCAAAATATAAGATAGCTTTTATAACTTTCTCAACCCTAAAGTTAGCTTCTATCTTAACCAAATCGGTCTTGGAGGGACTTAGGTTGGGATCTGATCTGAAGTGGTTGGCTTAAATTTTACCACCTCTTTCTTTGTGTATGGATACTGGAGAAGGCAGGAAATGCCTTTTCCATGTGTGTGGAAAGAGATATTGTTATACTCTCCTTCCCCTCTTGATATGTCTCCTCCTGCATACTATGTGATTTGTATCTTCACATCCAAAAAATTTATTTCCAAATTGGATATCTGAGTTGGGATTTGAGATTAGTTTTAGAAGATTGGTAGCTTAAAGTAGGGAAAAGTTTTGAAGTGGTCTAGAGCATTGGGATCAACACGAATCTCAGCTTTTTTGAAGGTTTCATCTTTTCAGCAAGCTTTACATCTTCTTTAAAGTGGAGTTCCACCAACTTTTGAAAGTCTTTGAGAATTTTTGTTCTTGAGCCTCATATTTATATATTTTAAGGACAGGATCCCGTTGCCAGAAGATTCTAGAAGGGTTAATTGGTTGTTAGAGGAGATGTTTCAAGGTGTTTTAACTCTAGAATTTGAGATTTTGAGGAACCAATCATGGGGGACTAGAATTTACTAATGATGAACAAAACAAGCCATGTTCGATCAAGTTAACTTGGCTCTTTTACAAGGGAAGGATATCACTTTTGGCAGGGCTTTTGGAGATGAATTTTTCCATCTCTTCTAGAAGAAGAAAAAATAGCAAAGGAGAACATGATGCTTTAAGAGAAAGCTCAGCCATAACAAGGTTCCCAAGATTTTCCAATTTTCTCAAAAAAAAAAACTTGACTGGGGCAACTTGATCAACATTTTTGTTTTATCACTGAGCTATAACTTTTATGGAAGCCATGGAATCCAATTTTTGAAGTCTTGTGAAATCTTCCACGGATGAAAAAGTGCTTACGGAAGAATCAAGACTCCATTTGTTCAGGGACACATTTATAAATTTTATCCATCCTTCATATGAAAGGGGTGATAAATTCCTAGAATGCTTGATGGAGTCCAGCCTTCTCTTAGGTGGAGGAGTCTAGTTTGGTTGATCCTGCTGGATCTGAGGATTGCTGTATTACATGGACTGGTTGTGGCTATTAGCTCTTGGAGAGTCGTGAGAGTTCTGTACTAGTTGTTCCTTTAGAGTTTTCTTCAAACCACACTGGAGACATTCTTCTTGATAAGAAGATGCCAAGAGAGCATTAACCATAGTAATCTTGCTTATTTTTCTCTTACTTTTCTACTGTCTTAACTCTCAATGCCTTTCTTTTTTACATTCTTTTGAAGATTGCATTTCCTTCGAACTCATTCTTCCAATTTTCATGTTCTTAATTCCCTTCTTTCTCAGAAAAAGTACTATGAACATGTTTTCGTCTTTTTGGAATTTGAGAGGCTTTTACTTGCTGTCTTGTGCACTTCTGAGTCACCCTATGTAGAAGGCATTATTTAATATAATGGATATTGATGGGATCCAATGGAGTTAGATATCTCCACAAAAAGTACCAAGATACTTTTTTTTTTTTGAAATCATAGAGCTCTTTACTTACTGTCTAGTGCACGCTTGAGTCACGTTAACTAACAGATGTTATAATTTACCTTAGGTATCTTTGAGGTATTTGAAGGCTTTCGAATGCTGTGAATCTGAATACTAGGTGAATTAGTTCATTCCGTTGTCTTGTTGATAGATAAAGGAAGGTAATTGGAAAACGAGTTTATAATTGGCTGGGGAGCTTTTTCCTCTATTTCTTGTTTCCCTGCCTTTACCATTCGTTTTCTTTCAAAAATTGTTTTGTGGCCTCTATTCTCATGCCATTTGGGAGTTCCACGTCTGTCTCTCTTGGACTCAGTTGTTCCCCATCTGATAGAGAAGCTATCTGCCATTTGGGAGTTCCTCGTCTGTCTCTTGGACTCTTGGAATCTTCAGATATTACTGCTCTTCTAACCTTAATTGGTGATTTTGTTGTTTGGGAGGGGAGAAGCTATCTTCGTTTGTGTCGCCTATTCCCCTTGGGTGGGTTTTCCTGTAGTTCTTCCTTTTATTGTCAGCTGAATTCTATGTCTTTAAGTCCTACTACCTTCTCACTTTTTTGGAAGATCATTGTCACGAAGAAGGCTAACTTTTTGTGATGGAGATAGCTCAGTATGGTTACTATTATGGATCGTGTTTGTAAGTTTGTGCCTAAGGTTGGGGCCCTCTGGCCCAACGTTACAAATGGGTCTACCTGAGGACTTGGATCATCTTCATGTGGTCCTGTTTGTGCAAGATTGTTTTAGAGCAGCATTTTTGAGTCATTCTTCTTCAGGTTTGCTTAGTGGAGAACTTGCAGTTTCATGTGCGAGGAGTTGCTCTCCCTGTCCTCTTTTTGTGAAAAAGGGTCTCTTGTTGTGGTTTGTCTATTATGCTATTGTTTGGAGAGTTTGGATGGAAAGGAATAATACGATTTTAAGTAGAGTGGAGCAATCTGTGGGCGAGGTGTGGTCCCTATTAGGTTGCATAGACTTTCAAATGCTGCGAAAACTTTTTGTTTGTAAAAACTTTCGCAATTGTCCTTCTTGTCTCATTTTGTTTGACTGGAGCCCACTTAGAGTTGTTGGGATCTGATCTGGGGTTTTGTTGTATTTTTTGTGTATTCTTACATTTTTGTCAATGAAATCTCGGGTTTTTTATATTAATTAAAAAAAGTAGCCCATAGAGCTGAATGCTTGGAAAATTATTGTGAGATGTTGGCATTGTTTAGCCTTTGAATATCTTTTTTTTCCATTCTCAGGCAGTGCTGTATGAGATTGTGGAAACTTTCTTATCTGCGTTTTTATTTAATTTGGCTTTATACTCTGTATTTTTTATATACTTGTTTGTTCCTAAAATTGTGTCCGTGTTTCAATTTTTATATATTTATCATAACATGGTTTGAATTTACTTCACAAACTGGGATTTAGAGCGTTTGTTTGAAGAAATCAAATTTGATGAAATATAGTGAATGTTATTTGGTAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTAATTTGATTCTCATCCCTCTTGTTGATATTTGTAATTTGTGTAGTAACTTGTGTTGAGTCATTCTTGCAGTCAGTTGACTAATTGTTTTAAGCTTCATTTCAATAGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGATTGAAAAGTTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGCGTTGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATCGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGGTACTTTTCTAATTTTGTATTAGCCGCAGTTAACTGAATTTTAAAATGTGAACTTTTTCTGGGAGGGGGAACCACCGGCCCCTAGGCCATATTATCTTCCTGGTTGTGAATGTATTCCTTTTGTTATTTCCTATTAAAGTGAAAATTGATTTTTTTTTTTCCTTTTCCTTTTTGATAAAGCTAAATTTAAATTGGTGAAAGGCAATGGGTAGTGGAGGGTTAGCTGAACAATTTCTTATTGTTTCTCGGTTTTCAATACAATAGATTTGAAATCAACCCACAATTTTTTGTTTAAAACTGCACATCTTTGTTTATTTAAAATTTTTAGTATCTCAGTTTAAATAAAGTCCTCATTTATGGTGTCCAAGACCTATCTCCTTCATGTGCATGTCTTGTCTTTTTACCGTGTGTTTGAACAAACTTTTAGTTTCTTCTCCTTGCCATGCCGATATGGCTATGTTTAAATCCAAGTTTTTCTTAATGTAATACTACTTTATTGTAATGCACCTTTCGGTGCTTTGGGAGCTTTCTCCTCCCATTTCGTTTATCAATGAAATTGTTTCCCAATCCAAAAAAAGGTATGCTTGATTAAATTTTGCAATTGCTGTACTAAACTACCTTAGTTTCTGGTACTTTTAGTAATTGAAAATAACTCAATCCAGAATATTGGATGGTTTATTGATATTCATTATTCTAATGGGAAATAAATTCTCACGTATCTTGTTTTACAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACTACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCACCAGTGTTTTTGACCGACTTGGTCGTCAATCTCATGATCTGGATTTAACAGAGTCTAGTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAAAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACGTCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGAAATAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAAGATACACATAAGGATCAACCTTCGTTACCTGCAAATTCCTCACGTGAAATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCATTATCAGGACCAAGGGCAAATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAAGAGTTCCAGAAACCTCCATTATCTGCTAATGGTGAGCTCTCTTTTCTGGTGTCTGACTTTCTATTTAAATAATAGTTTCCTTGCACGACTCTTTTGTTTATCTCTTTCTCATTCTATTTTTCCCGTATTTGATCATCAATAATCTGTTTGCGCTCATACTTTATTATTCCCTAGTTAGTAATTCATTTTAAGTAACTTTCTCATGTTACCTAATGCAGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTAAGAAGTCACTCATTTTTTGCTCTTCTGAAGAAACTGGTGACTGTATACCATCTTACGTTGATTTTTTACATACAGGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCGTCATAGTAACGGATGCAACCACTGGGCAACCCAAAGGGTGAGGTGTTTCATTTCTTTATTATTGTACCTCAGCTATCTTTAATCTCTTTTTGTTTCCTCTACTGGAGACTACAAAGTTTCCTATGTTACGTTTTAATAAATTGAGCATGTGATTGGAGCAGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTACCCGTCATATTTCTAACATTTTTCTTTGTAGTTTGAAGCATTACTCAAAAAAAAGTGTTGGCAAACTTAAGCTTTGTTTTTTTTTCCGTCTTTTTCTTTACTTCAAGTTAGCATTCGTACGTTTAATATGCTCTTCTTCTTTTTTTGGTTAGGAAGTTGTGTGGGAACGTGATATTCTTTCTTTTTTAAAAAAATGGATTTTTGTTCAAGGTTTTGGTTGCTTTTCACATAATCATTGAATTTTTGCTGTTGTTTCCATATCTAACTAAGCAGTGAGCGGAAGTTAAATAAAGTTCTCATAAATCTTGAAATGAAAATGGATCTTGAAGCAAACATAAAAGATGTAATTTTCTTTCACTTTTGGGGCTTGTGGCCAACTTATTCAACTGGTTTCTTCCACTGGTATTATTATTTGAACATCTTAATCGTGATACAATAACCATGCCACATGACGACACAACTAGCATGATATGTTTTAGTCAAGTAGTGCACGTGTATCAGATTGATTAGAACGAACATTTTGTTGAGGTGTCTGCTGCATTATGTATGTAGTCAACAAATAAAGCTGCAAGTTTGATTGATTTGTCAATTGCAGGTCGCAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCTGTTTCCTACTTCAAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

mRNA sequence

ATGAACTCGTTGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCAAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGATTGAAAAGTTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGCGTTGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATCGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACTACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCACCAGTGTTTTTGACCGACTTGGTCGTCAATCTCATGATCTGGATTTAACAGAGTCTAGTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAAAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACGTCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGAAATAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAAGATACACATAAGGATCAACCTTCGTTACCTGCAAATTCCTCACGTGAAATTTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAAGAGTTCCAGAAACCTCCATTATCTGCTAATGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCGTCATAGTAACGGATGCAACCACTGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTCGCAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCTGTTTCCTACTTCAAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Coding sequence (CDS)

ATGAACTCGTTGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGACGGAATGGCAAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGAGCCGCCTGCTAAAGCTTCTGCCAATGAGGTGCCCACACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAATAATTCTCACAATCTGGAGTCTGATTCTGAAAGAGGGAAGATTGAAAAGTTGTCTAGCAGACGACGTACTAGGGAATGGAGAGGAATTGCTAATGAGGAAACCCGCGTTGTTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTGGTCATCGGAAAAGGAGCCGGCCTGACGATCATCAAGGCACTGAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACTACGAGGCCCTCTAATGCATCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAATCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTCATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCACCAGTGTTTTTGACCGACTTGGTCGTCAATCTCATGATCTGGATTTAACAGAGTCTAGTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATGAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAAAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACGTCTGAAAATGAAGATGTTAATATTCAGGGCCACAGAGTATTTGATGATTCTTGGACTGCCGAATCAGAAATAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGAGAATTCTGATGATGAACGTGTGGCACAAGATACACATAAGGATCAACCTTCGTTACCTGCAAATTCCTCACGTGAAATTTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAAGAGTTCCAGAAACCTCCATTATCTGCTAATGGCCAATTTGCTGGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAATGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTGTAAAAGTCGTCATAGTAACGGATGCAACCACTGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTCGCAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTATCTGGCCTCGTGCTGTGCGAGGCTCGCTGTTTCCTACTTCAAGATTTACCAGAGCTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCGATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACCACAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Protein sequence

MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDTRNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASNSDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSGQLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSENEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSSREIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK*

Homology

[Close]

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-14
Identity = 66/218 (30.28%), Postives = 103/218 (47.25%), Query Frame = 0


Query: 410 KDQPSLPANSSREIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK---- 469
           +++P L      +  +++ EL+  ++ V+  E         +       LQ E +K    
Sbjct: 99  EEEPGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNM 158

Query: 470 --PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATT 529
             PP +A           EADAR+I+V NV + AT + L  HF+  G V +V I+ D  +
Sbjct: 159 SPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFS 218

Query: 530 GQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTVI--WPRAVRGS 589
           G PKG AY+EF  KES   +L+LD + F  R +KV  K  ++  G ST    +PRA   +
Sbjct: 219 GHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRA 278

Query: 590 LFPTSRFTRAPFMRGVPGGFRARPPMKL---GARSMQW 617
                  +R+ F      GF +RP  ++    AR+  W
Sbjct: 279 RTTNYNSSRSRFY----SGFNSRPRGRVYRGRARATSW 302

[Close]

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-13
Identity = 64/203 (31.53%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 425 LQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK------PPLSANGQFAGTR 484
           +++ EL+  ++ V+  E         +       LQ E +K      PP +A        
Sbjct: 114 IEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIE 173

Query: 485 PLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKE 544
              EADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G PKG AY+EF  KE
Sbjct: 174 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKE 233

Query: 545 SAENALSLDGTSFMSRILKVARKNASQLEGASTVI--WPRAVRGSLFPTSRFTRAPFMRG 604
           S   +L+LD + F  R +KV  K  ++  G ST    +PRA   +       +R+ F   
Sbjct: 234 SVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTTNYNSSRSRFY-- 293

Query: 605 VPGGFRARPPMKL---GARSMQW 617
              GF +RP  ++    AR+  W
Sbjct: 294 --SGFNSRPRGRVYRGRARATSW 302

[Close]

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-13
Identity = 65/218 (29.82%), Postives = 103/218 (47.25%), Query Frame = 0


Query: 410 KDQPSLPANSSREIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK---- 469
           +++P L      +  +++ EL+  ++ V+  E         +       LQ E +K    
Sbjct: 95  EEEPGLVEADPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNM 154

Query: 470 --PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATT 529
             PP +A           EADAR+I+V NV + AT + L  HF+  G V +V I+ D  +
Sbjct: 155 SPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFS 214

Query: 530 GQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTVI--WPRAVRGS 589
           G PKG AY+EF  KES   +L+LD + F  R +KV  K  ++  G ST    +PR+   +
Sbjct: 215 GHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYRA 274

Query: 590 LFPTSRFTRAPFMRGVPGGFRARPPMKL---GARSMQW 617
                  +R+ F      GF +RP  ++    AR+  W
Sbjct: 275 RTTNYNSSRSRFY----SGFNSRPRGRIYRGRARATSW 298

[Close]

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-13
Identity = 70/229 (30.57%), Postives = 107/229 (46.72%), Query Frame = 0


Query: 396 VENSDDERVAQDTHKDQPSLPANSSREIFLQESELQGTRSAVQVTENGEPVTLVNQRKTP 455
           +E  +DE + ++        P   + +  +++ EL+  ++ V+  E         +    
Sbjct: 83  LEELEDEELEEEE-------PGELTGDQTIEDPELEAIKARVREME---------EEAEK 142

Query: 456 ASNLQKEFQK------PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKF 515
              LQ E +K      PP +A           EADAR+I+V NV + AT + L  HF+  
Sbjct: 143 LKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGC 202

Query: 516 GEVVKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGA 575
           G V +V I+ D  TG PKG AY+EF  KES   +L+LD + F  R +KV  K  ++  G 
Sbjct: 203 GSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGI 262

Query: 576 STVI--WPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQW 617
           ST    +PRA R     +S  +R+ F  G     R R   +  AR+  W
Sbjct: 263 STTDRGFPRA-RYRARASSYSSRSRFYSGYTPRPRGR-VYRGRARATSW 292

[Close]

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-13
Identity = 70/229 (30.57%), Postives = 107/229 (46.72%), Query Frame = 0


Query: 396 VENSDDERVAQDTHKDQPSLPANSSREIFLQESELQGTRSAVQVTENGEPVTLVNQRKTP 455
           +E  +DE + ++        P   + +  +++ EL+  ++ V+  E         +    
Sbjct: 82  LEELEDEELEEEE-------PGELTGDQTIEDPELEAIKARVREME---------EEAEK 141

Query: 456 ASNLQKEFQK------PPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKF 515
              LQ E +K      PP +A           EADAR+I+V NV + AT + L  HF+  
Sbjct: 142 LKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGC 201

Query: 516 GEVVKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGA 575
           G V +V I+ D  TG PKG AY+EF  KES   +L+LD + F  R +KV  K  ++  G 
Sbjct: 202 GSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGI 261

Query: 576 STVI--WPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQW 617
           ST    +PRA R     +S  +R+ F  G     R R   +  AR+  W
Sbjct: 262 STTDRGFPRA-RYRARASSYSSRSRFYSGYTPRPRGR-VYRGRARATSW 291

[Close]

BLAST of Chy4G080060 vs. ExPASy TrEMBL
Match: A0A0A0L9I7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1)

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 630/684 (92.11%), Postives = 639/684 (93.42%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNS EMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPT KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           + +EYG T VENDEYGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNIQGHRVFDDSWTAES +RKGSNLRTVAFRAVENSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQR 480
           R+I                            FLQESELQGTRSAVQV ENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQ+EFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 VKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTV 600
           +KV+IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV RKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQWKRDNQTTTADNGASLS 657
           IWPRAVRGS FPTSRFTRAPFMRGVPGGFRARPPMKL ARSMQWKRDNQTTTADNGASLS
Sbjct: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 660

[Close]

BLAST of Chy4G080060 vs. ExPASy TrEMBL
Match: A0A5D3BPZ5 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00280 PE=4 SV=1)

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 621/656 (94.66%), Postives = 637/656 (97.10%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+IFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTV WPRAVRGS FPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 657
           FRARPPMKLGARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKPADK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Chy4G080060 vs. ExPASy TrEMBL
Match: A0A1S3CFZ8 (uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1198.7 bits (3100), Expect = 0.0e+00
Identity = 621/656 (94.66%), Postives = 637/656 (97.10%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+IFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTV WPRAVRGS FPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 657
           FRARPPMKLGARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKPADK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Chy4G080060 vs. ExPASy TrEMBL
Match: A0A1S3CGU7 (uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1187.6 bits (3071), Expect = 0.0e+00
Identity = 618/656 (94.21%), Postives = 634/656 (96.65%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+I   ESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFA TRPL
Sbjct: 421 RDI---ESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTV WPRAVRGS FPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 657
           FRARPPMKLGARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKPADK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 652

[Close]

BLAST of Chy4G080060 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 621/684 (90.79%), Postives = 637/684 (93.13%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQR 480
           R+I                            FLQESELQGTRSAVQVTENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQR 480

Query: 481 KTPASNLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQKEFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 VKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTV 600
           +KV+IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV RKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQWKRDNQTTTADNGASLS 657
            WPRAVRGS FPTSRFTR PFMRGVPGGFRARPPMKLGARSMQWKRDNQT TADNGASLS
Sbjct: 601 TWPRAVRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLS 660

[Close]

BLAST of Chy4G080060 vs. NCBI nr
Match: XP_011651784.1 (nucleolin 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 1219 bits (3155), Expect = 0.0
Identity = 630/656 (96.04%), Postives = 639/656 (97.41%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNS EMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPT KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           + +EYG T VENDEYGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNIQGHRVFDDSWTAES +RKGSNLRTVAFRAVENSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+IFLQESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFAGTRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTVIWPRAVRGS FPTSRFTRAPFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 656
           FRARPPMKL ARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 656

[Close]

BLAST of Chy4G080060 vs. NCBI nr
Match: XP_011651785.1 (nucleolin 1 isoform X3 [Cucumis sativus] >KGN58820.2 hypothetical protein Csa_001137 [Cucumis sativus])

HSP 1 Score: 1208 bits (3125), Expect = 0.0
Identity = 627/656 (95.58%), Postives = 636/656 (96.95%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNS EMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPT KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           + +EYG T VENDEYGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNIQGHRVFDDSWTAES +RKGSNLRTVAFRAVENSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+I   ESELQGTRSAVQV ENGEPVTLVNQRKTPASNLQ+EFQKPPLSANGQFAGTRPL
Sbjct: 421 RDI---ESELQGTRSAVQVMENGEPVTLVNQRKTPASNLQEEFQKPPLSANGQFAGTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTVIWPRAVRGS FPTSRFTRAPFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRAVRGSPFPTSRFTRAPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 656
           FRARPPMKL ARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKP DK
Sbjct: 601 FRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPVDK 653

[Close]

BLAST of Chy4G080060 vs. NCBI nr
Match: XP_011651783.1 (nucleolin 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1204 bits (3116), Expect = 0.0
Identity = 630/684 (92.11%), Postives = 639/684 (93.42%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MNS EMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPT KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           + +EYG T VENDEYGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDSTSE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNIQGHRVFDDSWTAES +RKGSNLRTVAFRAVENSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQR 480
           R+I                            FLQESELQGTRSAVQV ENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQ+EFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 VKVVIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVARKNASQLEGASTV 600
           +KV+IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV RKNASQLEGASTV
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV 600

Query: 601 IWPRAVRGSLFPTSRFTRAPFMRGVPGGFRARPPMKLGARSMQWKRDNQTTTADNGASLS 656
           IWPRAVRGS FPTSRFTRAPFMRGVPGGFRARPPMKL ARSMQWKRDNQTTTADNGASLS
Sbjct: 601 IWPRAVRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLS 660

[Close]

BLAST of Chy4G080060 vs. NCBI nr
Match: XP_008461791.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01130.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1204 bits (3114), Expect = 0.0
Identity = 621/656 (94.66%), Postives = 637/656 (97.10%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+IFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFA TRPL
Sbjct: 421 RDIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTV WPRAVRGS FPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 656
           FRARPPMKLGARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKPADK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 655

[Close]

BLAST of Chy4G080060 vs. NCBI nr
Match: XP_008461792.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo])

HSP 1 Score: 1192 bits (3084), Expect = 0.0
Identity = 618/656 (94.21%), Postives = 634/656 (96.65%), Query Frame = 0


Query: 1   MNSLEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+S EMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP PKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180
           RNNSHNLESDSERGK EKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSTSVFDRLGRQSHDLDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS+SVFDRLGRQS D+DLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 QLAEYGVTSVENDEYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSTSE 360
           +L EYGVTSVEND+YGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360

Query: 361 NEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQDTHKDQPSLPANSS 420
           NEDVNI+GHRVFDDSWTAES +RKGSNLRTVAFRAV+NSDDERVAQ T KDQPSL ANSS
Sbjct: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420

Query: 421 REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFAGTRPL 480
           R+I   ESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFA TRPL
Sbjct: 421 RDI---ESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPL 480

Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV+IVTDATTGQPKGSAYVEFMRKESA
Sbjct: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 540

Query: 541 ENALSLDGTSFMSRILKVARKNASQLEGASTVIWPRAVRGSLFPTSRFTRAPFMRGVPGG 600
           ENALSLDGTSFMSRILKV RKNASQLEGASTV WPRAVRGS FPTSRFTR PFMRGVPGG
Sbjct: 541 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTSRFTRVPFMRGVPGG 600

Query: 601 FRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSIPSPGARSLTYVRTEPKPADK 656
           FRARPPMKLGARSMQWKRDNQT TADNGASLSGNSIPSPGARSLTYVRTEPKPADK
Sbjct: 601 FRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIPSPGARSLTYVRTEPKPADK 652

[Close]

BLAST of Chy4G080060 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 403.7 bits (1036), Expect = 2.9e-112
Identity = 296/676 (43.79%), Postives = 387/676 (57.25%), Query Frame = 0


Query: 6   MGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65
           MGS D VDDRTF  DF+ +G+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRR+EE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDTRNNSH 125
           A NEL +FL DDS SFV+WLWDHLA S+D Y      +S  E  T KS +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 126 NLESDSERGKIEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSRPD 185
            L+S+ ++G+ +K +  RR R+WR            + VS +      +    RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWRS---------QPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 186 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSAS--NSDT 245
           D +  +REA   VS    RRLLQFA+RDA+A +RP+N+S E   KRLRSVVS S  NS  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKS-TSVFDRLGRQ--SHDLDLTESSG 305
            +  R+++SVA+V NPMATV+KAV EA+ED  + KS  SVFDR+     S  LD     G
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLG 300

Query: 306 QLA---EYGVTSVENDEYGDMNHSEDRPYSATYLER--SNYIG---KYSRDEPMFEPETG 365
           +++   E      +  E   + +++    +  Y E   +N  G    +S D         
Sbjct: 301 EVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPDFSSDRGRLGSSVN 360

Query: 366 LASDSTSENEDVNIQG---HRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQ--- 425
           ++  ST     +N      HR+ DDS        KG+N +    R  E +   + A    
Sbjct: 361 VSHPSTYLGNRINNPNSLQHRLVDDSKRV-----KGTNYQN---RLPEVATKHKTASFSG 420

Query: 426 --DTHK-----DQPSLPANSSREIFLQESELQGTRSAVQV-TENGEPVTLVNQRKTPASN 485
             DT K     +Q  +P +   + ++ E  L  + +  Q+ T+     T+ N    PA++
Sbjct: 421 NIDTGKTVKLEEQRKIP-DVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNVKPAAS 480

Query: 486 LQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIV 545
           + KE      S  G  + TRPLE+A +RTIFV+NVHF ATKDSLSRHFNKFGEV+K  IV
Sbjct: 481 V-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIV 540

Query: 546 TDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVAR-KNASQLEGASTVIWPRA 605
           TD  TGQP GSAY+EF RKE+AENALSLDGTSFMSRILK+ +  N    E AS++ W R 
Sbjct: 541 TDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSMSWSRG 600

Query: 606 VRGSLFPTSRFTRAP-FMRGVPGGFRARPPMKLGARSMQWKRDNQTTTADNGASLSGNSI 653
                    RFTRAP + RG  G  R R  ++ G RSMQWKRD    +AD G   + N++
Sbjct: 601 --------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRD----SADTG---NNNNV 631

[Close]

BLAST of Chy4G080060 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 90.5 bits (223), Expect = 5.4e-18
Identity = 145/578 (25.09%), Postives = 242/578 (41.87%), Query Frame = 0


Query: 12  VDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREEAQNELN 71
           VD  TF +    +  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 72  VFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTPKSPVAEPDTRNNSHNLESDS 131
            FL + S  FV  LW+ L             + +N    PK+ V   D  +N   ++   
Sbjct: 65  AFLKEQSWKFVVCLWELLVKYF---------SQSNSASGPKTDV---DFGSNDTLIKQGL 124

Query: 132 ERGKIEKLSSRRRTREWRGIANE------------ETRVVPRSEVSRVKHSSPEQVPGHR 191
              K +      +  +     NE            E  V P+ E  ++        P  R
Sbjct: 125 SSRKYDDYDC--KAADGTNSMNEQLISVTAPIDDIEAPVSPKVEKMKMSRQELIDSPCTR 184

Query: 192 KRSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSAS 251
            R R  ++           S    R++L+  +    AT +P + +   + K      S +
Sbjct: 185 ARRRKKENWN---------SSGYSRKVLRSVI--VSATQQPCDRNPAKYEK------SMN 244

Query: 252 NSDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKST----SVFDRLGRQSHDLDL 311
               T + R      ++ +  A   +AV+    D    + T    SV+DRLGR S +  L
Sbjct: 245 ERSRTLKKRPYSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVL 304

Query: 312 TESSGQLAEYGVTSVENDEYGDMNHSEDRP-YSATYLERSNYIGK-------YSRDEPMF 371
              S  L+++G+ + E        H +  P + A Y E+ + I +       Y    P F
Sbjct: 305 DTESRTLSKFGIQTRETKV-----HQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQF 364

Query: 372 EPETGLASDSTSENEDVNIQGHRVFDDSWTAESEIRKGSNLRTVAFRAVENSDDERVAQD 431
           + +    S++ +  E      H  ++ S       RK    R     +  + +   V Q 
Sbjct: 365 DKDRKPKSETITSTEP-----HIAYNLS-------RK----RRYGMVSPNSGEFSYVPQY 424

Query: 432 THKDQ----PSLPANSS--REIFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQK 491
              +Q    PSL ++ S  ++IF   SE++  +  +Q  E       + Q K       +
Sbjct: 425 KQAEQDFEKPSLLSHQSTKQDIF---SEIKNVKEKMQELE-----LRIIQSKQLKKQKVE 484

Query: 492 EFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHF-NKFGEVVKVVIVTD 551
           E +  P S   Q+      + +++R I V+NV++AA K+++S  F +K G V  V++VTD
Sbjct: 485 ERKPSPQSGESQYQE----DVSESRVIHVTNVYYAAKKEAISMFFSSKCGAVQNVIVVTD 517

Query: 552 ATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV 559
             T  PKG+A+V F  KES   A++L GT F SR +KV
Sbjct: 545 PVTRHPKGTAFVTFATKESVGKAVALSGTMFYSRPIKV 517

[Close]

BLAST of Chy4G080060 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-12
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EE DAR++FV NV +A T + + +HF   G V +V I+TD   GQPKG AYVEF+  E+ 
Sbjct: 87  EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTD-KFGQPKGFAYVEFVEVEAV 146

Query: 541 ENALSLDGTSFMSRILKVARKNAS 565
           + AL L+ +    R LKV +K  +
Sbjct: 147 QEALQLNESELHGRQLKVLQKRTN 169

[Close]

BLAST of Chy4G080060 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 5.8e-12
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EE D+R+I+V NV +A T + + +HF   G V +V I+TD   GQPKG AYVEF+  E+ 
Sbjct: 98  EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEVEAV 157

Query: 541 ENALSLDGTSFMSRILKVARKNAS 565
           +N+L L+ +    R +KV+ K  +
Sbjct: 158 QNSLILNESELHGRQIKVSAKRTN 180

[Close]

BLAST of Chy4G080060 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 5.8e-12
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 481 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVVIVTDATTGQPKGSAYVEFMRKESA 540
           EE D+R+I+V NV +A T + + +HF   G V +V I+TD   GQPKG AYVEF+  E+ 
Sbjct: 136 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEVEAV 195

Query: 541 ENALSLDGTSFMSRILKVARKNAS 565
           +N+L L+ +    R +KV+ K  +
Sbjct: 196 QNSLILNESELHGRQIKVSAKRTN 218

The following BLAST results are available for this feature:

BLAST of Chy4G080060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86U42	4.6e-14	30.28	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]
Q28165	1.3e-13	31.53	Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3	[more]
Q8CCS6	1.3e-13	29.82	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]
Q9DDY9	2.3e-13	30.57	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	2.3e-13	30.57	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]

BLAST of Chy4G080060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9I7	0.0e+00	92.11	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV...	[more]
A0A5D3BPZ5	0.0e+00	94.66	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A1S3CFZ8	0.0e+00	94.66	uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CGU7	0.0e+00	94.21	uncharacterized protein LOC103500309 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7U3W4	0.0e+00	90.79	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]

BLAST of Chy4G080060 vs. NCBI nr


Match Name	Identity	Description
XP_011651784.1	96.04	nucleolin 1 isoform X2 [Cucumis sativus]	[more]
XP_011651785.1	95.58	nucleolin 1 isoform X3 [Cucumis sativus] >KGN58820.2 hypothetical protein Csa_00...	[more]
XP_011651783.1	92.11	nucleolin 1 isoform X1 [Cucumis sativus]	[more]
XP_008461791.1	94.66	PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01...	[more]
XP_008461792.1	94.21	PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo]	[more]

BLAST of Chy4G080060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	2.9e-112	43.79	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	5.4e-18	25.09	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	1.5e-12	45.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.1	5.8e-12	42.86	polyadenylate-binding protein 1	[more]
AT5G51120.2	5.8e-12	42.86	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 487..559 e-value: 5.4E-22 score: 89.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 488..556 e-value: 3.0E-18 score: 65.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 486..563 score: 17.591679
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 29..92 e-value: 4.2E-7 score: 30.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 395..567 e-value: 7.2E-25 score: 89.7
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 15..96 e-value: 6.8E-10 score: 40.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 612..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 615..642
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..652
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 6..652
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 480..561

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G080060.1	Chy4G080060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding