Chy4G070810 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G070810
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Coatomer subunit zeta
Location	chrH04: 3203746 .. 3206624 (-)
RNA-Seq Expression	Chy4G070810
Synteny	Chy4G070810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTACCATTTTCTTTTCCCTTACGCCGTTTGGCTCTATCGGTGATTTGCTTCTTTCTGATCTGTGTTAGCGATAGAATGTGAATTAAATGGTTTTTTTGTTTGTTTGTTATTGATCGTTTTGTTGTAGTTTTATTTGGTAATTTCTTTGAATGATTTTGTGAAATGTGCGATTAGTTTCAGATGTACTCTGATTAGAATTTAAATTAGATTGAGAAGAGGTGTTTAGGAGTGAAATAATGATGGACAAGGAGGATAAGAGTGTCTTGCGTACTCTAATTTTTTTGCAATTGAACGGTTGATCGTGATTTTTGTTTATTTATTAGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTGAGTGAAATCTTCTAATTAGTTCTTTTGAAGCAATTGTAAGTAATTCACAGTGATGCATTATACTTGAAAACTAAATTTTGCTGCACTTATGAAGAGTTTTAAACACTCAGGAAATCAATCCAAACACACTCTTAATCTTCTCTAGCATTAGTGTGAAAAGAGAGCCAAAATGTAATAAGGAAATCAAAGGAGTGTTGGAAAACATGTGTAATTGAAGACGGAATGTAAACAAGATCACAAAGTATGAAAACAATGACAAAGTGGGTTATATTGAAATTGTCAAATTGGAATAAGTTTTAGATTACAAATCGATCCTAGAATGCACAACTGAAACATGAGTATGTTATTACATTACAATACAACTACATCCCATTACGATGTACCAAATAGTACTACCAAACACTCCCTTAGTATTTTGATTCCATCTAAAATATAAGGACTTGGCTATAACATTTTCATATGCTCTAGGAAAATAGATGAGGTTTTATTTGTGTGATTATTGTCATCATGCGTTACTACAGTGCTTCTTGTGAAGTTCATTGTATGCAATTATATATAAAATTTAATGTTTCGAAGAAACCAACCAAAAATCACATTGAGAAACTGTTTCCCAGAACCAAAATTTCCTTATATTTTAAACAGTTGAGAGACTGCAAGAAACTGCAAGGGAGTACAAGCTGATATGAACGGCTAAGTCTTGGGTATTCGAGTGGCATTACTTATATAAATTAAATGTACTGAGGATTTGGCCATTTTATGAAGAACACATTGAATGGTGCCCTTGATCGTGCATAATATGATCAATTAGGACAATCAGCATGGGGTGACCTATTGGTAAATAAAAGGTTTGGGTTTGATAAAGGACTAAGAGAGAATGAGTTTAATCTACGATGACCATCTACTTAGAATTTAATATTCCGCGAGTTTCCTTAACATCTAAATATTTTAGGGTCAAGTAGATTGTCTCGTGAGATCAATTGAAGTGTGTGTAAGCTGAGGGTCACTCACAAACATAAAACATCAATCAATTGGGACAGGCACCAATTTCCTTGCTCTAATGTATAACATCAATGGTATCAACCATTGGTGGACTTTTCTTTTCATTTATCAATCTATCTAAAAAAAAGGTGTATCCTCCCTGCCAACCAATGGCTTCTCAAATAACTGACTGTTTGCGGTATGTTTTATTTCCAAAGGCTCTTGGTTTACGCAGGAATTGCCTCCACTCCAACCTACAAAGTGAGGTCTTGAAAATAAACTAAAGCCTTTGCAAATGGACCGGAAAAAAACAATCAACCCCCCGCCAACAAAAACACCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCACCACCACCACCACCACCCAGGCCTGTAGGGGCTTCTTGAACTACCATTAGAATGCTTGGAATGAAATTATGCCACAATGAATTTTTAAATAATAACAATAATTATAGTATTTTATGTATATATTTGATAACCCAAGTTTTCATTGTGAAGAATTAATTAGCAATGAATTAGCTTCTTCTGCAATGACTAGTACAAAAGTAACGAGGGTTGTGTTCTTAGGTCGAACCCTGCAATGTTCTGAAATAAACTGTTGTCCTGCTAAATAAAATACTTCCCTGTCCAAGTATGGACATTCACTTCGATAACTCCTTTCTGTTTTATAGCACTACTTGTGTGTGCTTCTTGTTTTTTGTTTTAACTTTTTTTAAACTGTAGCTGGTTTTACCTGTCCAATCTATCTAAGCTAACTTTGTGTAACAGGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTGTAAGTAAATACCAATTCTTCCATTTTCTTTGGTTATTATTATTTATTTGTTTGTTTGTTTTTGCTATGTATCCTCTGCATTAATTTCATTTTCACTTCTTCAAGTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGTATGCCCCTTCTTTTCTCCCTCACTCAAAATCTTTCTTCTAGGTCTAATCCAGCCAGATATAGTGATAGACATACTAAAAACATAGAAAGAAATTCAAGAAATTTCTTTGCTAATTGCCTACCGACTGGCACTGTTCTTCTGTCACAATTCGATCCTTGGATTTCGATCTAAGTTTATTTTGACTGCACTAGTGCTCTTACTGTTCTGATATGATGTTTGTGAAGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGACTTTTGA

mRNA sequence

ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGACTTTTGA

Coding sequence (CDS)

ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTTGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTCGGGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTAATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGACTTTTGA

Protein sequence

MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNDF*

Homology

[Close]

BLAST of Chy4G070810 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY 60
           M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V       
Sbjct: 1   MINSLLITNNNGNIVFSKYYSNINDEKQSEYEKLLYQFTKDEWVNSKNEKHLVTEFSGYI 60

Query: 61  IVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDAC-GKAPTERLFLDKYGKICLCL 120
            V+T +GD+ +++ G +E DELAL++V F I  ++KD C  K  TE+ F+++  K  L L
Sbjct: 61  TVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKGVTEQNFIEQIPKFILYL 120

Query: 121 DEIVWTGILENTEKDRIKRLIRLK 143
           DEI+  G L+  + + I+    LK
Sbjct: 121 DEIIQRGHLDQVQLESIQNYSSLK 144

[Close]

BLAST of Chy4G070810 vs. ExPASy Swiss-Prot
Match: Q5NA06 (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 35/131 (26.72%), Postives = 59/131 (45.04%), Query Frame = 0


Query: 5   VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTV 64
           +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  
Sbjct: 10  ILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKF 69

Query: 65  LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDEIVWT 124
           + D+  +V G DE +EL LA V+   + AI          R  L+    I LCLDE+V  
Sbjct: 70  IQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDG 129

Query: 125 GILENTEKDRI 136
           GI+  T+   I
Sbjct: 130 GIVLETDAKAI 140

[Close]

BLAST of Chy4G070810 vs. ExPASy Swiss-Prot
Match: Q54CA7 (Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.3e-04
Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 4   AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIV 63
           A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   ++
Sbjct: 10  AIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCK-TSNCELEIIDNK--VVI 69

Query: 64  YTVLGDVAVYVVGKD-EYDELALAEVIFVITSAIKDACGKAP----TERLFLDKYGKICL 123
            +   DV ++VVG     +ELAL +V+  + S  K AC        T++ FL+ Y  I L
Sbjct: 70  GSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENYALIRL 129

Query: 124 CLDEIVWTGILENTEKDRI 136
            +DEIV  GI+   +++ I
Sbjct: 130 YIDEIVSDGIIFEVDEETI 145

[Close]

BLAST of Chy4G070810 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 148
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 148
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.7e-76
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 148
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. ExPASy TrEMBL
Match: A0A0A0LHA5 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_3G878220 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 148
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. ExPASy TrEMBL
Match: A0A6J1BYX2 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 148
           IVWTGILENTEKDRIKRLIRLKPP +F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]

BLAST of Chy4G070810 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 292 bits (747), Expect = 1.71e-99
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 147
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (746), Expect = 2.43e-99
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 147
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. NCBI nr
Match: XP_038896955.1 (TSET complex member tstD [Benincasa hispida])

HSP 1 Score: 291 bits (744), Expect = 4.91e-99
Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK+PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKSPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 147
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. NCBI nr
Match: XP_004136347.1 (TSET complex member tstD [Cucumis sativus] >KGN60102.1 hypothetical protein Csa_001692 [Cucumis sativus])

HSP 1 Score: 289 bits (739), Expect = 2.84e-98
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTALGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 147
           IVWTGILENTEKDRIKRLIRLKPPN+F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]

BLAST of Chy4G070810 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia])

HSP 1 Score: 288 bits (738), Expect = 4.04e-98
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGKAPTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPNDF 147
           IVWTGILENTEKDRIKRLIRLKPP +F
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]

BLAST of Chy4G070810 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 2.6e-69
Identity = 119/146 (81.51%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120
           VYT+LGDV++++VGKDEYDELALAE I++IT+A+KD CGK PTER+FLDKYG+ICLCLDE
Sbjct: 61  VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query: 121 IVWTGILENTEKDRIKRLIRLKPPND 147
           IVW G+LENT+KDRIKRLIRLKPP++
Sbjct: 121 IVWNGLLENTDKDRIKRLIRLKPPSE 146

The following BLAST results are available for this feature:

BLAST of Chy4G070810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0HLF1	4.7e-15	31.94	TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1	[more]
Q5NA06	1.2e-05	26.72	Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800...	[more]
Q54CA7	6.3e-04	28.78	Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb P...	[more]

BLAST of Chy4G070810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E691	1.3e-76	99.32	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A1S3CRC6	1.3e-76	99.32	Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1	[more]
A0A5A7TBS4	1.7e-76	98.64	Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92...	[more]
A0A0A0LHA5	1.1e-75	97.96	Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_3G878220 PE=3 SV=1	[more]
A0A6J1BYX2	1.4e-75	97.96	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1	[more]

BLAST of Chy4G070810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466411.1	1.71e-99	99.32	PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE...	[more]
KAA0038809.1	2.43e-99	98.64	SNARE-like superfamily protein [Cucumis melo var. makuwa]	[more]
XP_038896955.1	4.91e-99	98.64	TSET complex member tstD [Benincasa hispida]	[more]
XP_004136347.1	2.84e-98	97.96	TSET complex member tstD [Cucumis sativus] >KGN60102.1 hypothetical protein Csa_...	[more]
XP_022134177.1	4.04e-98	97.96	uncharacterized protein LOC111006502 [Momordica charantia]	[more]

BLAST of Chy4G070810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15370.1	2.6e-69	81.51	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..142 e-value: 9.2E-18 score: 66.5
None	No IPR available	PANTHER	PTHR11043:SF19	SUBFAMILY NOT NAMED	coord: 3..147
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..137 e-value: 5.0E-6 score: 26.5
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..147
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G070810.1	Chy4G070810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane