Chy4G068670 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGGTATATATCATTGTTATTTTCTTAACATTGAGTTTATTTCTTATCAGCTTTTATATAAAATAAAACTAAGTTTATAATTCTTTTGAAATAGATAACAAAATAATTTTTTTTTTAGCTTTAATAATATAATATAGTATGTTTTGTTTAAAAAATATTTATATTCTTTTCAAAATTTACTATTGAAATAAAAAATATAATTTTTTTAATTTCATAAAAAAATTGAGACTTGAGGTAAATATATATGGAAGGATTAATTGTTTTTATAGTTTTGTTTAATAATCCATTCTTTTTTAGTTTTCTGTTTTTGAAATTTATATTTGTTTTTTTTTCTCAATTTCTTTACTATAATTTTCAACATTTGTATACAAATATTTTGTATTCTTATTCAAATAATGTAAAGAAAACTAAGTTTTTAAATTACTTTTTTTACCTTTCAAATTTTTGTTTAATTTTTTAAAAACATTTGGATAGAAAAAGGTACAAAAAGAAATAAAAAGAAATAAAATAAAGAAAGGAAAATGGTGGAAAATAGCAAATTTGACAAAATATTTACAACATAGAACAAAATTTCAGATTCTTATTGATAGACGATAATAGAAGCTAATTAGTGATACATGATAGACAATGATAGAAGTTTATCAGTTTTTATCATTGATAGAATCTAAAATTTTACTGTAGCATATAAATATTTGAATTTATTTTACTATTTTTAAAAATATGTCGTTTAATTATTTTTTTACCTTTCAAATTTTTGTATAATTTTTTTAAAAACATTTGGATAGAAAAAGGGACAGCAAAACAAAATAAAGAAATTTATGGCTTAGAAGTAATTTTATAGAATTGAGTTATAAAAATTAGAGACAATAAAAAAAAATAAAAATAGAGACAATATGTATTTTTGTAAACAATTTAATTACTTTTCATATGTTACCATATAATTTTAAATTCTAGTTGAAAGATGTAAAATTAATAACATAAAGTTGATATGTATATCAGGAAACATGTTGTTCACATCACATAGAGATCTAAGAATCCGAATATGGAATTTCACAATTTCTGAAAAGTTCATTTGGAAAAAGACTTGTTCAGTTCCAAAGAAAACATCTTTGTTGTTATCATTATCGAAAACCAAAACAGATAGCAGCAGACGCCACAAACACAAAGACACCATTTCTTGCATTGCTTATTACCATTCACAGCACATTCTCCACACCGCTTCTCATGACAAAACCATCAAAGTTTGGAAAATCTCTGACCGTGTATGCATTGACTCCTCCATCCCACACGAACTCAAAGTCAGCTCCTTAACCATCAACCAAAACGATGGTTCACTCTTCACCTGTTCCTCAGATGCAACTGTCAAGATTTGGCGAAGACTATTCCCTCAAAACTCCCATACTCTTACAATGACACTCAAGTTCCAAACTTCCCCTGTTAACGCTGTGGTTTTAAGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA ATGGGCATGGGCAGTCTCCAGTACCGCAACAAGTCGTGTAATTTAGTGAGCTTAAAGGTTGAAGATGAGAAGAAAACTGATTACGAGTCCCAACAACAACAACAAGTTTGGTCAGATGAAAGAACAGTACTTAAGGGAATGAAGAAAAATAATAATAATAATTTGAATAATGATCACTGCATAGCATCGGTCCATGGTGGGGAAGGGAATATATATTCAATTGCTATTTCTTCTAAAGGACTCGTTTTTACTGCCTCTCACGATGGCGATATATGCCGTATTCGTGCCTGGAAACCGCCTGACTGTATGAACGCTGCCCACTTCAAGCTCTCCGCCGCCGCCGGACTCAACGCCATTGCTACTTCTGCACCTACCGTGACGCTCCCACTTTCCTCTATTCCGGATCCTCTGAGTGGCACTGAGGACACCACCGTCAGGATTTGGAGGAGGGAGGAAGGAGGTTGGTCTCATGAATGCTTGGCAGTGTTGGATGGCCATAGAGGGCCTGTCAGATGCTTAGCAGGGACCTTGAAAACCCTGGAAAACAGAGTAATGAACAAGATGGAGACGAGTGTTTTGGTTTATAGTGGGAGTTTGAACCAGACGTTTAAGGTTTGGCGAGTGAAGGTTTTTTTGAACCATAATGATCAAGACAAGAAGGGATTAATGGAGTATGAGGGGGAGGAGGAGGACTTGAAGATGAAGAAGCTCAATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACATAATTATTTCTGA MGMGSLQYRNKSCNLVSLKVEDEKKTDYESQQQQQVWSDERTVLKGMKKNNNNNLNNDHCIASVHGGEGNIYSIAISSKGLVFTASHDGDICRIRAWKPPDCMNAAHFKLSAAAGLNAIATSAPTVTLPLSSIPDPLSGTEDTTVRIWRREEGGWSHECLAVLDGHRGPVRCLAGTLKTLENRVMNKMETSVLVYSGSLNQTFKVWRVKVFLNHNDQDKKGLMEYEGEEEDLKMKKLNETSPVLSPSWVQKKLQHNYF* Homology
BLAST of Chy4G068670 vs. ExPASy Swiss-Prot
Match: O48716 (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 51/217 (23.50%), Postives = 94/217 (43.32%), Query Frame = 0
BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A1S3CRS7 (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo OX=3656 GN=LOC103504006 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54 Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A5A7TAM5 (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005020 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40 Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0
BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1FS64 (protein JINGUBANG-like OS=Cucurbita moschata OX=3662 GN=LOC111446752 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31 Identity = 78/118 (66.10%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1IXB8 (protein JINGUBANG-like OS=Cucurbita maxima OX=3661 GN=LOC111480780 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31 Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Chy4G068670 vs. ExPASy TrEMBL
Match: A0A6J1CLK4 (protein JINGUBANG-like OS=Momordica charantia OX=3673 GN=LOC111012075 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29 Identity = 73/128 (57.03%), Postives = 88/128 (68.75%), Query Frame = 0
BLAST of Chy4G068670 vs. NCBI nr
Match: XP_008466650.1 (PREDICTED: F-box/WD repeat-containing protein sel-10-like [Cucumis melo]) HSP 1 Score: 219 bits (557), Expect = 9.75e-69 Identity = 108/124 (87.10%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Chy4G068670 vs. NCBI nr
Match: XP_038897273.1 (protein JINGUBANG-like [Benincasa hispida]) HSP 1 Score: 202 bits (514), Expect = 1.21e-59 Identity = 104/140 (74.29%), Postives = 114/140 (81.43%), Query Frame = 0
BLAST of Chy4G068670 vs. NCBI nr
Match: KAA0038617.1 (F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa] >TYK31216.1 F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (439), Expect = 3.16e-51 Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0
BLAST of Chy4G068670 vs. NCBI nr
Match: XP_021646534.1 (protein JINGUBANG-like isoform X3 [Hevea brasiliensis]) HSP 1 Score: 154 bits (389), Expect = 1.88e-41 Identity = 98/227 (43.17%), Postives = 130/227 (57.27%), Query Frame = 0
BLAST of Chy4G068670 vs. NCBI nr
Match: QHO16809.1 (uncharacterized protein DS421_10g306770 [Arachis hypogaea]) HSP 1 Score: 150 bits (380), Expect = 2.62e-39 Identity = 110/297 (37.04%), Postives = 138/297 (46.46%), Query Frame = 0
BLAST of Chy4G068670 vs. TAIR 10
Match: AT3G50390.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-12 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of Chy4G068670 vs. TAIR 10
Match: AT4G34380.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of Chy4G068670 vs. TAIR 10
Match: AT3G18950.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of Chy4G068670 vs. TAIR 10
Match: AT1G49450.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09 Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Chy4G068670 vs. TAIR 10
Match: AT1G47610.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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