Chy2G037200 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G037200
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH02: 11641535 .. 11642070 (-)
RNA-Seq Expression	Chy2G037200
Synteny	Chy2G037200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTTCTTCTTCTTCTAAAAAAAACTCTCAAATTCCCTCAAATGGGTTACTCTATTTCCTTCCAATACTAACAAAATCTCACAAAAAGAAACCATTTTTCAAAGAAATTCAAAGCCTTCCACATTTGAGTTCCATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGTTCTTCAACAACCATTAATTTTGAAGAAAAACCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCAGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

mRNA sequence

TCTCTTCTTCTTCTTCTAAAAAAAACTCTCAAATTCCCTCAAATGGGTTACTCTATTTCCTTCCAATACTAACAAAATCTCACAAAAAGAAACCATTTTTCAAAGAAATTCAAAGCCTTCCACATTTGAGTTCCATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGTTCTTCAACAACCATTAATTTTGAAGAAAAACCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCAGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

Coding sequence (CDS)

TCTCTTCTTCTTCTTCTAAAAAAAACTCTCAAATTCCCTCAAATGGGTTACTCTATTTCCTTCCAATACTAACAAAATCTCACAAAAAGAAACCATTTTTCAAAGAAATTCAAAGCCTTCCACATTTGAGTTCCATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGTTCTTCAACAACCATTAATTTTGAAGAAAAACCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCAGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCATCACAATGA

Protein sequence

SLLLLLKKTLKFPQMGYSISFQY*QNLTKRNHFSKKFKAFHI*VPWLPKEEKQEEEQEKQQRPS*RTRRSRRTSRTTTSS*KKKKLKKVQVLQQPLILKKNQFQEEAVILKKKKKKKSVVVLQKQRDSKSQKSKYVHQLLKSEGFFQIQIQIVLYKDLLLLLSLLHQI*SFSSSSHHNX

Homology

The following BLAST results are available for this feature:

BLAST of Chy2G037200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G037200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G037200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy2G037200 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G037200.1	Chy2G037200.1	mRNA